RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 GPR142Q7Z601 462 aa15.96■□□□□ 0.15
MRPL55-228ENST00000476267 SIRT2Q8IXJ6 389 aa15.96■□□□□ 0.15
MRPL55-228ENST00000476267 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.96■□□□□ 0.15
MRPL55-228ENST00000476267 IL1RAPL2Q9NP60 686 aa15.96■□□□□ 0.15
MRPL55-228ENST00000476267 VCAM1P19320 739 aa15.95■□□□□ 0.14
MRPL55-228ENST00000476267 CACNB2Q08289 660 aaPredicted RBP15.95■□□□□ 0.14
MRPL55-228ENST00000476267 CERKLQ49MI3 558 aaPredicted RBP15.95■□□□□ 0.14
MRPL55-228ENST00000476267 CATSPERGQ6ZRH7 1159 aa15.95■□□□□ 0.14
MRPL55-228ENST00000476267 TTC6Q86TZ1 520 aa15.95■□□□□ 0.14
MRPL55-228ENST00000476267 ACER1Q8TDN7 264 aa15.95■□□□□ 0.14
MRPL55-228ENST00000476267 RABGAP1Q9Y3P9 1069 aa15.95■□□□□ 0.14
MRPL55-228ENST00000476267 PARP14Q460N5 1801 aa15.95■□□□□ 0.14
MRPL55-228ENST00000476267 PFASO15067 1338 aa15.94■□□□□ 0.14
MRPL55-228ENST00000476267 TRIOBPQ9H2D6 2365 aa15.94■□□□□ 0.14
MRPL55-228ENST00000476267 USP17L15C9J2P7 530 aa15.94■□□□□ 0.14
MRPL55-228ENST00000476267 USP17L13C9JLJ4 530 aa15.94■□□□□ 0.14
MRPL55-228ENST00000476267 USP17L11C9JVI0 530 aa15.94■□□□□ 0.14
MRPL55-228ENST00000476267 USP17L18D6R9N7 530 aa15.94■□□□□ 0.14
MRPL55-228ENST00000476267 USP17L22D6RA61 530 aa15.94■□□□□ 0.14
MRPL55-228ENST00000476267 USP17L17D6RBQ6 530 aa15.94■□□□□ 0.14
MRPL55-228ENST00000476267 USP17L19D6RCP7 530 aa15.94■□□□□ 0.14
MRPL55-228ENST00000476267 USP17L20D6RJB6 530 aa15.94■□□□□ 0.14
MRPL55-228ENST00000476267 COL6A1P12109 1028 aa15.94■□□□□ 0.14
MRPL55-228ENST00000476267 PDE6AP16499 860 aa15.94■□□□□ 0.14
MRPL55-228ENST00000476267 USP14P54578 494 aa15.94■□□□□ 0.14
MRPL55-228ENST00000476267 USP17L24Q0WX57 530 aa15.94■□□□□ 0.14
MRPL55-228ENST00000476267 ZYXQ15942 572 aaKnown RBP15.94■□□□□ 0.14
MRPL55-228ENST00000476267 CCL14Q16627 93 aa15.94■□□□□ 0.14
MRPL55-228ENST00000476267 ABCB5Q2M3G0 1257 aa15.94■□□□□ 0.14
MRPL55-228ENST00000476267 HSP90AB4PQ58FF6 505 aa15.94■□□□□ 0.14
MRPL55-228ENST00000476267 LHX8Q68G74 356 aa15.94■□□□□ 0.14
MRPL55-228ENST00000476267 PLEKHH3Q7Z736 793 aa15.94■□□□□ 0.14
MRPL55-228ENST00000476267 TRMT44Q8IYL2 757 aaKnown RBP15.94■□□□□ 0.14
MRPL55-228ENST00000476267 APBA2Q99767 749 aa15.94■□□□□ 0.14
MRPL55-228ENST00000476267 GDF15Q99988 308 aa15.94■□□□□ 0.14
MRPL55-228ENST00000476267 PAGR1Q9BTK6 254 aa15.94■□□□□ 0.14
MRPL55-228ENST00000476267 NBPF3Q9H094 633 aa15.94■□□□□ 0.14
MRPL55-228ENST00000476267 MAGEB6P1A0A0J9YX57 407 aa15.93■□□□□ 0.14
MRPL55-228ENST00000476267 SOX1O00570 391 aaPredicted RBP15.93■□□□□ 0.14
MRPL55-228ENST00000476267 IGHA2P01877 340 aa15.93■□□□□ 0.14
MRPL55-228ENST00000476267 ZKSCAN1P17029 563 aaPredicted RBP15.93■□□□□ 0.14
MRPL55-228ENST00000476267 RGS2P41220 211 aa15.93■□□□□ 0.14
MRPL55-228ENST00000476267 PDE3AQ14432 1141 aa15.93■□□□□ 0.14
MRPL55-228ENST00000476267 RAB3GAP1Q15042 981 aa15.93■□□□□ 0.14
MRPL55-228ENST00000476267 TTF1Q15361 905 aaPredicted RBP15.93■□□□□ 0.14
MRPL55-228ENST00000476267 SLC9C2Q5TAH2 1124 aa15.93■□□□□ 0.14
MRPL55-228ENST00000476267 RPAP2Q8IXW5 612 aaPredicted RBP15.93■□□□□ 0.14
MRPL55-228ENST00000476267 C11orf49Q9H6J7 331 aa15.93■□□□□ 0.14
MRPL55-228ENST00000476267 ZBTB40Q9NUA8 1239 aa15.93■□□□□ 0.14
MRPL55-228ENST00000476267 BTBD7Q9P203 1132 aa15.93■□□□□ 0.14
MRPL55-228ENST00000476267 MYH8P13535 1937 aa15.93■□□□□ 0.14
MRPL55-228ENST00000476267 ZNF532Q9HCE3 1301 aa15.93■□□□□ 0.14
MRPL55-228ENST00000476267 MYH7P12883 1935 aa15.92■□□□□ 0.14
MRPL55-228ENST00000476267 DNAH12Q6ZR08 3092 aa15.92■□□□□ 0.14
MRPL55-228ENST00000476267 A0A1W2PRG0 241 aa15.92■□□□□ 0.14
MRPL55-228ENST00000476267 SPDYE16A6NNV3 312 aaPredicted RBP15.92■□□□□ 0.14
MRPL55-228ENST00000476267 CCND3P30281 292 aaPredicted RBP15.92■□□□□ 0.14
MRPL55-228ENST00000476267 BMP8BP34820 402 aa15.92■□□□□ 0.14
MRPL55-228ENST00000476267 C7orf61Q8IZ16 206 aa15.92■□□□□ 0.14
MRPL55-228ENST00000476267 KIF1BPQ96EK5 621 aa15.92■□□□□ 0.14
MRPL55-228ENST00000476267 FEZ1Q99689 392 aa15.92■□□□□ 0.14
MRPL55-228ENST00000476267 DCP1AQ9NPI6 582 aaPredicted RBP15.92■□□□□ 0.14
MRPL55-228ENST00000476267 FLRT1Q9NZU1 646 aa15.92■□□□□ 0.14
MRPL55-228ENST00000476267 STAP2Q9UGK3 403 aa15.92■□□□□ 0.14
MRPL55-228ENST00000476267 HOXC6P09630 235 aa15.91■□□□□ 0.14
MRPL55-228ENST00000476267 MAP2K5Q13163 448 aa15.91■□□□□ 0.14
MRPL55-228ENST00000476267 SEPT2Q15019 361 aa15.91■□□□□ 0.14
MRPL55-228ENST00000476267 CLASRPQ8N2M8 674 aaKnown RBP15.91■□□□□ 0.14
MRPL55-228ENST00000476267 LCORLQ8N3X6 602 aa15.91■□□□□ 0.14
MRPL55-228ENST00000476267 SDR42E1Q8WUS8 393 aa15.91■□□□□ 0.14
MRPL55-228ENST00000476267 EDC3Q96F86 508 aaKnown RBP15.91■□□□□ 0.14
MRPL55-228ENST00000476267 CRNKL1Q9BZJ0 848 aaKnown RBP15.91■□□□□ 0.14
MRPL55-228ENST00000476267 BAZ2AQ9UIF9 1905 aaKnown RBP15.9■□□□□ 0.14
MRPL55-228ENST00000476267 COL6A3P12111 3177 aa15.9■□□□□ 0.14
MRPL55-228ENST00000476267 GOLIM4O00461 696 aa15.9■□□□□ 0.14
MRPL55-228ENST00000476267 PTPREP23469 700 aa15.9■□□□□ 0.14
MRPL55-228ENST00000476267 GRB14Q14449 540 aa15.9■□□□□ 0.14
MRPL55-228ENST00000476267 RPAP3Q9H6T3 665 aaPredicted RBP15.9■□□□□ 0.14
MRPL55-228ENST00000476267 CABP5Q9NP86 173 aa15.9■□□□□ 0.14
MRPL55-228ENST00000476267 SLC15A5A6NIM6 579 aa15.89■□□□□ 0.13
MRPL55-228ENST00000476267 POLR3DP05423 398 aaPredicted RBP15.89■□□□□ 0.13
MRPL55-228ENST00000476267 CYP2D6P10635 497 aa15.89■□□□□ 0.13
MRPL55-228ENST00000476267 MS4A1P11836 297 aa15.89■□□□□ 0.13
MRPL55-228ENST00000476267 CCNA1P78396 465 aa15.89■□□□□ 0.13
MRPL55-228ENST00000476267 SLFNL1Q499Z3 407 aa15.89■□□□□ 0.13
MRPL55-228ENST00000476267 KIAA1755Q5JYT7 1200 aa15.89■□□□□ 0.13
MRPL55-228ENST00000476267 DIEXFQ68CQ4 756 aaKnown RBP15.89■□□□□ 0.13
MRPL55-228ENST00000476267 SIAH1Q8IUQ4 282 aa15.89■□□□□ 0.13
MRPL55-228ENST00000476267 DNAJC2Q99543 621 aaKnown RBP15.89■□□□□ 0.13
MRPL55-228ENST00000476267 MCM9Q9NXL9 1143 aa15.89■□□□□ 0.13
MRPL55-228ENST00000476267 DDX19BQ9UMR2 479 aa15.89■□□□□ 0.13
MRPL55-228ENST00000476267 COG6Q9Y2V7 657 aa15.89■□□□□ 0.13
MRPL55-228ENST00000476267 GREB1LQ9C091 1923 aaPredicted RBP15.89■□□□□ 0.13
MRPL55-228ENST00000476267 IFIT2P09913 472 aaKnown RBP15.88■□□□□ 0.13
MRPL55-228ENST00000476267 ADD2P35612 726 aa15.88■□□□□ 0.13
MRPL55-228ENST00000476267 CCAR1Q8IX12 1150 aaKnown RBP15.88■□□□□ 0.13
MRPL55-228ENST00000476267 SLC44A5Q8NCS7 719 aa15.88■□□□□ 0.13
MRPL55-228ENST00000476267 NPLOC4Q8TAT6 608 aa15.88■□□□□ 0.13
MRPL55-228ENST00000476267 LRCH3Q96II8 777 aa15.88■□□□□ 0.13
MRPL55-228ENST00000476267 ZMYND8Q9ULU4 1186 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms