RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 NSUN7Q8NE18 718 aaKnown RBP21.15■□□□□ 0.98
ATG4B-217ENST00000475693 SWAP70Q9UH65 585 aa21.15■□□□□ 0.98
ATG4B-217ENST00000475693 GOLGA8AA7E2F4 631 aa21.14■□□□□ 0.98
ATG4B-217ENST00000475693 POTECB2RU33 542 aa21.14■□□□□ 0.98
ATG4B-217ENST00000475693 ATP2B2Q01814 1243 aa21.14■□□□□ 0.98
ATG4B-217ENST00000475693 TATDN1Q6P1N9 297 aa21.14■□□□□ 0.98
ATG4B-217ENST00000475693 PHKBQ93100 1093 aa21.14■□□□□ 0.98
ATG4B-217ENST00000475693 TMEM47Q9BQJ4 181 aa21.14■□□□□ 0.98
ATG4B-217ENST00000475693 ADARB2Q9NS39 739 aaKnown RBP21.14■□□□□ 0.98
ATG4B-217ENST00000475693 CCDC84Q86UT8 332 aaPredicted RBP21.14■□□□□ 0.97
ATG4B-217ENST00000475693 CHAMP1Q96JM3 812 aa21.14■□□□□ 0.97
ATG4B-217ENST00000475693 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.14■□□□□ 0.97
ATG4B-217ENST00000475693 SEPT2Q15019 361 aa21.13■□□□□ 0.97
ATG4B-217ENST00000475693 METTL16Q86W50 562 aaKnown RBP21.13■□□□□ 0.97
ATG4B-217ENST00000475693 FAM43AQ8N2R8 423 aa21.13■□□□□ 0.97
ATG4B-217ENST00000475693 GUCY1A2P33402 732 aa21.13■□□□□ 0.97
ATG4B-217ENST00000475693 TROAPQ12815 778 aa21.13■□□□□ 0.97
ATG4B-217ENST00000475693 LRRC47Q8N1G4 583 aaKnown RBP21.13■□□□□ 0.97
ATG4B-217ENST00000475693 CLIP2Q9UDT6 1046 aa21.13■□□□□ 0.97
ATG4B-217ENST00000475693 ZDHHC9Q9Y397 364 aa21.13■□□□□ 0.97
ATG4B-217ENST00000475693 PTPDC1A2A3K4 754 aa21.12■□□□□ 0.97
ATG4B-217ENST00000475693 GH2P01242 217 aa21.12■□□□□ 0.97
ATG4B-217ENST00000475693 POTEIP0CG38 1075 aa21.12■□□□□ 0.97
ATG4B-217ENST00000475693 POTEJP0CG39 1038 aa21.12■□□□□ 0.97
ATG4B-217ENST00000475693 TNNI2P48788 182 aa21.12■□□□□ 0.97
ATG4B-217ENST00000475693 PRKG1Q13976 671 aa21.12■□□□□ 0.97
ATG4B-217ENST00000475693 RAB3GAP1Q15042 981 aa21.12■□□□□ 0.97
ATG4B-217ENST00000475693 GJB4Q9NTQ9 266 aa21.12■□□□□ 0.97
ATG4B-217ENST00000475693 TCP11L1Q9NUJ3 509 aa21.12■□□□□ 0.97
ATG4B-217ENST00000475693 MTMR4Q9NYA4 1195 aa21.12■□□□□ 0.97
ATG4B-217ENST00000475693 MYH8P13535 1937 aa21.12■□□□□ 0.97
ATG4B-217ENST00000475693 hCG_1642624A0A1W2PR95 340 aa21.12■□□□□ 0.97
ATG4B-217ENST00000475693 FDPSP14324 419 aaKnown RBP21.12■□□□□ 0.97
ATG4B-217ENST00000475693 MMP14P50281 582 aa21.12■□□□□ 0.97
ATG4B-217ENST00000475693 EAPPQ56P03 285 aaPredicted RBP21.12■□□□□ 0.97
ATG4B-217ENST00000475693 SYNE3Q6ZMZ3 975 aa21.12■□□□□ 0.97
ATG4B-217ENST00000475693 TMTC2Q8N394 836 aa21.12■□□□□ 0.97
ATG4B-217ENST00000475693 FANCBQ8NB91 859 aa21.12■□□□□ 0.97
ATG4B-217ENST00000475693 PNMA1Q8ND90 353 aa21.12■□□□□ 0.97
ATG4B-217ENST00000475693 KAT14Q9H8E8 782 aa21.12■□□□□ 0.97
ATG4B-217ENST00000475693 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.12■□□□□ 0.97
ATG4B-217ENST00000475693 IGKV6D-41A0A0C4DH26 115 aa21.11■□□□□ 0.97
ATG4B-217ENST00000475693 ADM5C9JUS6 153 aa21.11■□□□□ 0.97
ATG4B-217ENST00000475693 EPHX2P34913 555 aa21.11■□□□□ 0.97
ATG4B-217ENST00000475693 L1TD1Q5T7N2 865 aaKnown RBP21.11■□□□□ 0.97
ATG4B-217ENST00000475693 CATIPQ7Z7H3 387 aa21.11■□□□□ 0.97
ATG4B-217ENST00000475693 DGKHQ86XP1 1220 aa21.11■□□□□ 0.97
ATG4B-217ENST00000475693 MTA3Q9BTC8 594 aa21.11■□□□□ 0.97
ATG4B-217ENST00000475693 CPVLQ9H3G5 476 aa21.11■□□□□ 0.97
ATG4B-217ENST00000475693 CHMP5Q9NZZ3 219 aa21.11■□□□□ 0.97
ATG4B-217ENST00000475693 BAZ2BQ9UIF8 2168 aaKnown RBP21.11■□□□□ 0.97
ATG4B-217ENST00000475693 PLEKHA8P1O95397 391 aa21.1■□□□□ 0.97
ATG4B-217ENST00000475693 GOLGA8HP0CJ92 632 aa21.1■□□□□ 0.97
ATG4B-217ENST00000475693 TNFAIP1Q13829 316 aa21.1■□□□□ 0.97
ATG4B-217ENST00000475693 ABCB5Q2M3G0 1257 aa21.1■□□□□ 0.97
ATG4B-217ENST00000475693 SIAH1Q8IUQ4 282 aa21.1■□□□□ 0.97
ATG4B-217ENST00000475693 STAG2Q8N3U4 1231 aa21.1■□□□□ 0.97
ATG4B-217ENST00000475693 ZNF526Q8TF50 670 aaPredicted RBP21.1■□□□□ 0.97
ATG4B-217ENST00000475693 PIBF1Q8WXW3 757 aa21.1■□□□□ 0.97
ATG4B-217ENST00000475693 L3MBTL3Q96JM7 780 aaPredicted RBP21.1■□□□□ 0.97
ATG4B-217ENST00000475693 AIFM3Q96NN9 605 aa21.1■□□□□ 0.97
ATG4B-217ENST00000475693 CPLX1O14810 134 aa21.1■□□□□ 0.97
ATG4B-217ENST00000475693 SYT1P21579 422 aa21.1■□□□□ 0.97
ATG4B-217ENST00000475693 NTRK3Q16288 839 aa21.1■□□□□ 0.97
ATG4B-217ENST00000475693 RTN1Q16799 776 aa21.1■□□□□ 0.97
ATG4B-217ENST00000475693 FOXD4L6Q3SYB3 417 aaPredicted RBP21.1■□□□□ 0.97
ATG4B-217ENST00000475693 FOXD4L3Q6VB84 417 aaPredicted RBP21.1■□□□□ 0.97
ATG4B-217ENST00000475693 CWC22Q9HCG8 908 aaKnown RBP21.1■□□□□ 0.97
ATG4B-217ENST00000475693 RAD21O60216 631 aa21.09■□□□□ 0.97
ATG4B-217ENST00000475693 NBPF11Q86T75 865 aa21.09■□□□□ 0.97
ATG4B-217ENST00000475693 OTUD7BQ6GQQ9 843 aa21.09■□□□□ 0.97
ATG4B-217ENST00000475693 SMARCC2Q8TAQ2 1214 aa21.09■□□□□ 0.97
ATG4B-217ENST00000475693 HERC5Q9UII4 1024 aaKnown RBP21.09■□□□□ 0.97
ATG4B-217ENST00000475693 EEF2P13639 858 aaKnown RBP21.08■□□□□ 0.97
ATG4B-217ENST00000475693 ANKS1AQ92625 1134 aa21.08■□□□□ 0.97
ATG4B-217ENST00000475693 COL2A1P02458 1487 aaPredicted RBP21.08■□□□□ 0.97
ATG4B-217ENST00000475693 GUCY1B3Q02153 619 aa21.08■□□□□ 0.96
ATG4B-217ENST00000475693 USP17L2Q6R6M4 530 aa21.08■□□□□ 0.96
ATG4B-217ENST00000475693 TAF1DQ9H5J8 278 aaPredicted RBP21.08■□□□□ 0.96
ATG4B-217ENST00000475693 USP17L5A8MUK1 530 aa21.07■□□□□ 0.96
ATG4B-217ENST00000475693 PHF20L1A8MW92 1017 aa21.07■□□□□ 0.96
ATG4B-217ENST00000475693 APOBEC3FQ8IUX4 373 aaKnown RBP21.07■□□□□ 0.96
ATG4B-217ENST00000475693 CCDC17Q96LX7 622 aa21.07■□□□□ 0.96
ATG4B-217ENST00000475693 INPP5BP32019 993 aa21.06■□□□□ 0.96
ATG4B-217ENST00000475693 FMR1Q06787 632 aaKnown RBP eCLIP21.06■□□□□ 0.96
ATG4B-217ENST00000475693 LARP1BQ659C4 914 aaKnown RBP21.06■□□□□ 0.96
ATG4B-217ENST00000475693 SLC26A6Q9BXS9 759 aa21.06■□□□□ 0.96
ATG4B-217ENST00000475693 GLIS2Q9BZE0 524 aaPredicted RBP21.06■□□□□ 0.96
ATG4B-217ENST00000475693 RRAGCQ9HB90 399 aa21.06■□□□□ 0.96
ATG4B-217ENST00000475693 A0A1W2PRG0 241 aa21.06■□□□□ 0.96
ATG4B-217ENST00000475693 TTLL1O95922 423 aa21.06■□□□□ 0.96
ATG4B-217ENST00000475693 ECE1P42892 770 aa21.06■□□□□ 0.96
ATG4B-217ENST00000475693 USP48Q86UV5 1035 aa21.06■□□□□ 0.96
ATG4B-217ENST00000475693 SRBD1Q8N5C6 995 aaKnown RBP21.06■□□□□ 0.96
ATG4B-217ENST00000475693 ACER1Q8TDN7 264 aa21.06■□□□□ 0.96
ATG4B-217ENST00000475693 ORC3Q9UBD5 711 aaPredicted RBP21.06■□□□□ 0.96
ATG4B-217ENST00000475693 FRMPD2Q68DX3 1309 aaPredicted RBP21.06■□□□□ 0.96
ATG4B-217ENST00000475693 PLIN4Q96Q06 1357 aa21.06■□□□□ 0.96
ATG4B-217ENST00000475693 VPS37CA5D8V6 355 aaPredicted RBP21.05■□□□□ 0.96
ATG4B-217ENST00000475693 TOP1P11387 765 aaKnown RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms