RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 BMP8BP34820 402 aa15.12■□□□□ 0.01
CCDC57-208ENST00000475635 CACNB2Q08289 660 aaPredicted RBP15.12■□□□□ 0.01
CCDC57-208ENST00000475635 MAP3K12Q12852 859 aa15.12■□□□□ 0.01
CCDC57-208ENST00000475635 RAB3GAP1Q15042 981 aa15.12■□□□□ 0.01
CCDC57-208ENST00000475635 CCL14Q16627 93 aa15.12■□□□□ 0.01
CCDC57-208ENST00000475635 MORN1Q5T089 497 aa15.12■□□□□ 0.01
CCDC57-208ENST00000475635 CEP85Q6P2H3 762 aa15.12■□□□□ 0.01
CCDC57-208ENST00000475635 C12orf42Q96LP6 360 aa15.12■□□□□ 0.01
CCDC57-208ENST00000475635 APBA2Q99767 749 aa15.12■□□□□ 0.01
CCDC57-208ENST00000475635 EHD4Q9H223 541 aa15.12■□□□□ 0.01
CCDC57-208ENST00000475635 EXOC6BQ9Y2D4 811 aa15.12■□□□□ 0.01
CCDC57-208ENST00000475635 COL11A1P12107 1806 aaPredicted RBP15.11■□□□□ 0.01
CCDC57-208ENST00000475635 USP17L15C9J2P7 530 aa15.11■□□□□ 0.01
CCDC57-208ENST00000475635 USP17L13C9JLJ4 530 aa15.11■□□□□ 0.01
CCDC57-208ENST00000475635 USP17L11C9JVI0 530 aa15.11■□□□□ 0.01
CCDC57-208ENST00000475635 USP17L18D6R9N7 530 aa15.11■□□□□ 0.01
CCDC57-208ENST00000475635 USP17L22D6RA61 530 aa15.11■□□□□ 0.01
CCDC57-208ENST00000475635 USP17L17D6RBQ6 530 aa15.11■□□□□ 0.01
CCDC57-208ENST00000475635 USP17L19D6RCP7 530 aa15.11■□□□□ 0.01
CCDC57-208ENST00000475635 USP17L20D6RJB6 530 aa15.11■□□□□ 0.01
CCDC57-208ENST00000475635 SYN1P17600 705 aa15.11■□□□□ 0.01
CCDC57-208ENST00000475635 CCND3P30281 292 aaPredicted RBP15.11■□□□□ 0.01
CCDC57-208ENST00000475635 USP14P54578 494 aa15.11■□□□□ 0.01
CCDC57-208ENST00000475635 USP17L24Q0WX57 530 aa15.11■□□□□ 0.01
CCDC57-208ENST00000475635 ABCB5Q2M3G0 1257 aa15.11■□□□□ 0.01
CCDC57-208ENST00000475635 CERKLQ49MI3 558 aaPredicted RBP15.11■□□□□ 0.01
CCDC57-208ENST00000475635 TTC6Q86TZ1 520 aa15.11■□□□□ 0.01
CCDC57-208ENST00000475635 AACSQ86V21 672 aa15.11■□□□□ 0.01
CCDC57-208ENST00000475635 CWC22Q9HCG8 908 aaKnown RBP15.11■□□□□ 0.01
CCDC57-208ENST00000475635 RABGAP1Q9Y3P9 1069 aa15.11■□□□□ 0.01
CCDC57-208ENST00000475635 PFASO15067 1338 aa15.11■□□□□ 0.01
CCDC57-208ENST00000475635 SMCHD1A6NHR9 2005 aa15.1■□□□□ 0.01
CCDC57-208ENST00000475635 CNMDO75829 334 aa15.1■□□□□ 0.01
CCDC57-208ENST00000475635 VCAM1P19320 739 aa15.1■□□□□ 0.01
CCDC57-208ENST00000475635 PLCD1P51178 756 aa15.1■□□□□ 0.01
CCDC57-208ENST00000475635 CCNA1P78396 465 aa15.1■□□□□ 0.01
CCDC57-208ENST00000475635 HNRNPUQ00839 825 aaKnown RBP eCLIP15.1■□□□□ 0.01
CCDC57-208ENST00000475635 LHX8Q68G74 356 aa15.1■□□□□ 0.01
CCDC57-208ENST00000475635 TMED8Q6PL24 325 aaPredicted RBP15.1■□□□□ 0.01
CCDC57-208ENST00000475635 CATSPERGQ6ZRH7 1159 aa15.1■□□□□ 0.01
CCDC57-208ENST00000475635 ERC1Q8IUD2 1116 aa15.1■□□□□ 0.01
CCDC57-208ENST00000475635 ACER1Q8TDN7 264 aa15.1■□□□□ 0.01
CCDC57-208ENST00000475635 KIAA1683Q9H0B3 1180 aa15.1■□□□□ 0.01
CCDC57-208ENST00000475635 A0A0G2JMZ2 1700 aa15.09■□□□□ 0.01
CCDC57-208ENST00000475635 GLRX3O76003 335 aaKnown RBP15.09■□□□□ 0.01
CCDC57-208ENST00000475635 SHMT1P34896 483 aa15.09■□□□□ 0.01
CCDC57-208ENST00000475635 MAGEA10P43363 369 aaPredicted RBP15.09■□□□□ 0.01
CCDC57-208ENST00000475635 MAP2K5Q13163 448 aa15.09■□□□□ 0.01
CCDC57-208ENST00000475635 WDR78Q5VTH9 848 aa15.09■□□□□ 0.01
CCDC57-208ENST00000475635 RIOK1Q9BRS2 568 aaKnown RBP15.09■□□□□ 0.01
CCDC57-208ENST00000475635 CABP5Q9NP86 173 aa15.09■□□□□ 0.01
CCDC57-208ENST00000475635 LAMA2P24043 3122 aaKnown RBP15.08■□□□□ 0.01
CCDC57-208ENST00000475635 ZNF236Q9UL36 1845 aa15.08■□□□□ 0.01
CCDC57-208ENST00000475635 PLXNA1Q9UIW2 1896 aa15.08■□□□□ 0.01
CCDC57-208ENST00000475635 A0A0C4DFX4 3053 aa15.08■□□□□ 0
CCDC57-208ENST00000475635 MAGEB6P1A0A0J9YX57 407 aa15.08■□□□□ 0
CCDC57-208ENST00000475635 COL6A1P12109 1028 aa15.08■□□□□ 0
CCDC57-208ENST00000475635 EDC3Q96F86 508 aaKnown RBP15.08■□□□□ 0
CCDC57-208ENST00000475635 IL1RAPL2Q9NP60 686 aa15.08■□□□□ 0
CCDC57-208ENST00000475635 SPDYE16A6NNV3 312 aaPredicted RBP15.07■□□□□ 0
CCDC57-208ENST00000475635 POLR3DP05423 398 aaPredicted RBP15.07■□□□□ 0
CCDC57-208ENST00000475635 PTPREP23469 700 aa15.07■□□□□ 0
CCDC57-208ENST00000475635 GUCY1A2P33402 732 aa15.07■□□□□ 0
CCDC57-208ENST00000475635 TTF1Q15361 905 aaPredicted RBP15.07■□□□□ 0
CCDC57-208ENST00000475635 LBX2Q6XYB7 198 aa15.07■□□□□ 0
CCDC57-208ENST00000475635 RPAP3Q9H6T3 665 aaPredicted RBP15.07■□□□□ 0
CCDC57-208ENST00000475635 FLRT1Q9NZU1 646 aa15.07■□□□□ 0
CCDC57-208ENST00000475635 BTBD7Q9P203 1132 aa15.07■□□□□ 0
CCDC57-208ENST00000475635 SLC15A5A6NIM6 579 aa15.06■□□□□ 0
CCDC57-208ENST00000475635 PDE6AP16499 860 aa15.06■□□□□ 0
CCDC57-208ENST00000475635 GABPAQ06546 454 aa15.06■□□□□ 0
CCDC57-208ENST00000475635 SEPT2Q15019 361 aa15.06■□□□□ 0
CCDC57-208ENST00000475635 LRRC26Q2I0M4 334 aa15.06■□□□□ 0
CCDC57-208ENST00000475635 HSP90AB4PQ58FF6 505 aa15.06■□□□□ 0
CCDC57-208ENST00000475635 SLC9C2Q5TAH2 1124 aa15.06■□□□□ 0
CCDC57-208ENST00000475635 MFSD14CQ5VZR4 134 aa15.06■□□□□ 0
CCDC57-208ENST00000475635 TDHQ8IZJ6 230 aa15.06■□□□□ 0
CCDC57-208ENST00000475635 SLC17A8Q8NDX2 589 aa15.06■□□□□ 0
CCDC57-208ENST00000475635 RHPN1Q8TCX5 695 aa15.06■□□□□ 0
CCDC57-208ENST00000475635 PANK1Q8TE04 598 aa15.06■□□□□ 0
CCDC57-208ENST00000475635 CRNKL1Q9BZJ0 848 aaKnown RBP15.06■□□□□ 0
CCDC57-208ENST00000475635 UBE2OQ9C0C9 1292 aaKnown RBP15.06■□□□□ 0
CCDC57-208ENST00000475635 MCM9Q9NXL9 1143 aa15.06■□□□□ 0
CCDC57-208ENST00000475635 IVNS1ABPQ9Y6Y0 642 aa15.06■□□□□ 0
CCDC57-208ENST00000475635 LTBP2Q14767 1821 aa15.06■□□□□ 0
CCDC57-208ENST00000475635 CUL9Q8IWT3 2517 aa15.05■□□□□ 0
CCDC57-208ENST00000475635 MPHOSPH10O00566 681 aaKnown RBP15.05■□□□□ -0
CCDC57-208ENST00000475635 ATP2B2Q01814 1243 aa15.05■□□□□ -0
CCDC57-208ENST00000475635 EVX2Q03828 476 aa15.05■□□□□ -0
CCDC57-208ENST00000475635 GRB14Q14449 540 aa15.05■□□□□ -0
CCDC57-208ENST00000475635 LRIT3Q3SXY7 679 aa15.05■□□□□ -0
CCDC57-208ENST00000475635 GPR153Q6NV75 609 aa15.05■□□□□ -0
CCDC57-208ENST00000475635 NPLOC4Q8TAT6 608 aa15.05■□□□□ -0
CCDC57-208ENST00000475635 ZNF532Q9HCE3 1301 aa15.04■□□□□ -0
CCDC57-208ENST00000475635 A0A1W2PRG0 241 aa15.04■□□□□ -0
CCDC57-208ENST00000475635 APBB1O00213 710 aa15.04■□□□□ -0
CCDC57-208ENST00000475635 GOLIM4O00461 696 aa15.04■□□□□ -0
CCDC57-208ENST00000475635 HOXC6P09630 235 aa15.04■□□□□ -0
CCDC57-208ENST00000475635 CLASRPQ8N2M8 674 aaKnown RBP15.04■□□□□ -0
CCDC57-208ENST00000475635 DEFB123Q8N688 67 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms