RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 PHACTR4Q8IZ21 702 aa10.64□□□□□ -0.71
SMC5-203ENST00000475540 BCL7CQ8WUZ0 217 aaPredicted RBP10.64□□□□□ -0.71
SMC5-203ENST00000475540 HRASLS5Q96KN8 279 aa10.64□□□□□ -0.71
SMC5-203ENST00000475540 CCDC74BQ96LY2 380 aa10.64□□□□□ -0.71
SMC5-203ENST00000475540 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.64□□□□□ -0.71
SMC5-203ENST00000475540 SLC22A31A6NKX4 558 aa10.63□□□□□ -0.71
SMC5-203ENST00000475540 TNNI2P48788 182 aa10.63□□□□□ -0.71
SMC5-203ENST00000475540 AOC3Q16853 763 aa10.63□□□□□ -0.71
SMC5-203ENST00000475540 C22orf34Q6ZV56 151 aa10.63□□□□□ -0.71
SMC5-203ENST00000475540 TP53INP2Q8IXH6 220 aa10.63□□□□□ -0.71
SMC5-203ENST00000475540 FLCNQ8NFG4 579 aa10.63□□□□□ -0.71
SMC5-203ENST00000475540 TNKS2Q9H2K2 1166 aa10.63□□□□□ -0.71
SMC5-203ENST00000475540 GMIPQ9P107 970 aa10.63□□□□□ -0.71
SMC5-203ENST00000475540 ZNF865P0CJ78 1059 aaPredicted RBP10.62□□□□□ -0.71
SMC5-203ENST00000475540 GBP1P32455 592 aa10.62□□□□□ -0.71
SMC5-203ENST00000475540 KIR3DL1P43629 444 aa10.62□□□□□ -0.71
SMC5-203ENST00000475540 BNIP3Q12983 259 aa10.62□□□□□ -0.71
SMC5-203ENST00000475540 NKPD1Q17RQ9 610 aa10.62□□□□□ -0.71
SMC5-203ENST00000475540 LRRFIP1Q32MZ4 808 aaKnown RBP10.62□□□□□ -0.71
SMC5-203ENST00000475540 MFSD4AQ8N468 514 aa10.62□□□□□ -0.71
SMC5-203ENST00000475540 DNAJB8Q8NHS0 232 aa10.62□□□□□ -0.71
SMC5-203ENST00000475540 PRR33A8MZF0 331 aa10.61□□□□□ -0.71
SMC5-203ENST00000475540 DNAJA2O60884 412 aa10.61□□□□□ -0.71
SMC5-203ENST00000475540 CHMP4BP1P59074 171 aa10.61□□□□□ -0.71
SMC5-203ENST00000475540 ARSHQ5FYA8 562 aa10.61□□□□□ -0.71
SMC5-203ENST00000475540 SPACA3Q8IXA5 215 aa10.61□□□□□ -0.71
SMC5-203ENST00000475540 PPP1R13LQ8WUF5 828 aa10.61□□□□□ -0.71
SMC5-203ENST00000475540 RAG1P15918 1043 aa10.6□□□□□ -0.71
SMC5-203ENST00000475540 CLCN7P51798 805 aa10.6□□□□□ -0.71
SMC5-203ENST00000475540 PAK2Q13177 524 aa10.6□□□□□ -0.71
SMC5-203ENST00000475540 BAHD1Q8TBE0 780 aaPredicted RBP10.6□□□□□ -0.71
SMC5-203ENST00000475540 ASB11Q8WXH4 323 aa10.6□□□□□ -0.71
SMC5-203ENST00000475540 KIF2CQ99661 725 aa10.6□□□□□ -0.71
SMC5-203ENST00000475540 CDKAL1Q5VV42 579 aa10.59□□□□□ -0.71
SMC5-203ENST00000475540 AGBL5Q8NDL9 886 aa10.59□□□□□ -0.71
SMC5-203ENST00000475540 SPATA32Q96LK8 384 aa10.59□□□□□ -0.71
SMC5-203ENST00000475540 TGIF2Q9GZN2 237 aa10.59□□□□□ -0.71
SMC5-203ENST00000475540 RGS13O14921 159 aa10.58□□□□□ -0.72
SMC5-203ENST00000475540 CDCP2Q5VXM1 449 aa10.58□□□□□ -0.72
SMC5-203ENST00000475540 SPRED2Q7Z698 418 aa10.58□□□□□ -0.72
SMC5-203ENST00000475540 FERD3LQ96RJ6 166 aa10.58□□□□□ -0.72
SMC5-203ENST00000475540 PAK6Q9NQU5 681 aaPredicted RBP10.58□□□□□ -0.72
SMC5-203ENST00000475540 OAS3Q9Y6K5 1087 aaKnown RBP10.58□□□□□ -0.72
SMC5-203ENST00000475540 CAPN6Q9Y6Q1 641 aa10.58□□□□□ -0.72
SMC5-203ENST00000475540 IMPDH2P12268 514 aa10.57□□□□□ -0.72
SMC5-203ENST00000475540 COL9A2Q14055 689 aaPredicted RBP10.57□□□□□ -0.72
SMC5-203ENST00000475540 OVOS1Q6IE37 1185 aa10.57□□□□□ -0.72
SMC5-203ENST00000475540 ATG4CQ96DT6 458 aa10.57□□□□□ -0.72
SMC5-203ENST00000475540 HSPA12BQ96MM6 686 aa10.57□□□□□ -0.72
SMC5-203ENST00000475540 CNNM2Q9H8M5 875 aa10.57□□□□□ -0.72
SMC5-203ENST00000475540 KCNH3Q9ULD8 1083 aa10.57□□□□□ -0.72
SMC5-203ENST00000475540 CD8BP10966 210 aa10.56□□□□□ -0.72
SMC5-203ENST00000475540 TCF3P15923 654 aa10.56□□□□□ -0.72
SMC5-203ENST00000475540 ZNF574Q6ZN55 896 aaPredicted RBP10.56□□□□□ -0.72
SMC5-203ENST00000475540 NFXL1Q6ZNB6 911 aa10.56□□□□□ -0.72
SMC5-203ENST00000475540 PIWIL2Q8TC59 973 aaKnown RBP10.56□□□□□ -0.72
SMC5-203ENST00000475540 TMEM40Q8WWA1 233 aa10.56□□□□□ -0.72
SMC5-203ENST00000475540 GPRASP2Q96D09 838 aa10.56□□□□□ -0.72
SMC5-203ENST00000475540 E9PSI1 815 aa10.55□□□□□ -0.72
SMC5-203ENST00000475540 TNK2Q07912 1038 aa10.55□□□□□ -0.72
SMC5-203ENST00000475540 FBXW10Q5XX13 1052 aa10.55□□□□□ -0.72
SMC5-203ENST00000475540 NLRC3Q7RTR2 1065 aa10.55□□□□□ -0.72
SMC5-203ENST00000475540 RNF141Q8WVD5 230 aa10.55□□□□□ -0.72
SMC5-203ENST00000475540 KREMEN1Q96MU8 473 aa10.55□□□□□ -0.72
SMC5-203ENST00000475540 ANTXR1Q9H6X2 564 aa10.55□□□□□ -0.72
SMC5-203ENST00000475540 CCSER2Q9H7U1 834 aa10.55□□□□□ -0.72
SMC5-203ENST00000475540 ZNRF3Q9ULT6 936 aa10.55□□□□□ -0.72
SMC5-203ENST00000475540 ERCC5P28715 1186 aaPredicted RBP10.54□□□□□ -0.72
SMC5-203ENST00000475540 CD96P40200 585 aa10.54□□□□□ -0.72
SMC5-203ENST00000475540 ANGEL2Q5VTE6 544 aaKnown RBP10.54□□□□□ -0.72
SMC5-203ENST00000475540 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.54□□□□□ -0.72
SMC5-203ENST00000475540 ACBD3Q9H3P7 528 aa10.54□□□□□ -0.72
SMC5-203ENST00000475540 ST14Q9Y5Y6 855 aa10.54□□□□□ -0.72
SMC5-203ENST00000475540 PITPNM2Q9BZ72 1349 aa10.54□□□□□ -0.72
SMC5-203ENST00000475540 MEIS3P2A8K0S8 358 aa10.53□□□□□ -0.72
SMC5-203ENST00000475540 H3BS24 57 aa10.53□□□□□ -0.72
SMC5-203ENST00000475540 NME1P15531 152 aaKnown RBP10.53□□□□□ -0.72
SMC5-203ENST00000475540 CCNFP41002 786 aa10.53□□□□□ -0.72
SMC5-203ENST00000475540 RAD51AP2Q09MP3 1159 aa10.53□□□□□ -0.72
SMC5-203ENST00000475540 PLCL1Q15111 1095 aa10.53□□□□□ -0.72
SMC5-203ENST00000475540 ABI1Q8IZP0 508 aa10.53□□□□□ -0.72
SMC5-203ENST00000475540 RASGRP4Q8TDF6 673 aa10.53□□□□□ -0.72
SMC5-203ENST00000475540 Q96M66 194 aa10.53□□□□□ -0.72
SMC5-203ENST00000475540 SEMA3GQ9NS98 782 aa10.53□□□□□ -0.72
SMC5-203ENST00000475540 GINM1Q9NU53 330 aa10.53□□□□□ -0.72
SMC5-203ENST00000475540 EFR3BQ9Y2G0 817 aa10.53□□□□□ -0.72
SMC5-203ENST00000475540 INPP5FQ9Y2H2 1132 aa10.53□□□□□ -0.72
SMC5-203ENST00000475540 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.52□□□□□ -0.73
SMC5-203ENST00000475540 IRAK1P51617 712 aa10.52□□□□□ -0.73
SMC5-203ENST00000475540 IKZF1Q13422 519 aa10.52□□□□□ -0.73
SMC5-203ENST00000475540 THAP5Q7Z6K1 395 aa10.52□□□□□ -0.73
SMC5-203ENST00000475540 UBE2FQ969M7 185 aa10.52□□□□□ -0.73
SMC5-203ENST00000475540 ASPNQ9BXN1 380 aa10.52□□□□□ -0.73
SMC5-203ENST00000475540 ZSWIM5Q9P217 1185 aa10.52□□□□□ -0.73
SMC5-203ENST00000475540 PPT2Q9UMR5 302 aa10.52□□□□□ -0.73
SMC5-203ENST00000475540 UBOX5O94941 541 aa10.51□□□□□ -0.73
SMC5-203ENST00000475540 FUT4P22083 530 aa10.51□□□□□ -0.73
SMC5-203ENST00000475540 GJA8P48165 433 aa10.51□□□□□ -0.73
SMC5-203ENST00000475540 INTS3Q68E01 1043 aaKnown RBP10.51□□□□□ -0.73
SMC5-203ENST00000475540 WFDC3Q8IUB2 231 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms