RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 USP17L11C9JVI0 530 aa30.29■■■□□ 2.44
TMEM54-205ENST00000475208 USP17L18D6R9N7 530 aa30.29■■■□□ 2.44
TMEM54-205ENST00000475208 USP17L22D6RA61 530 aa30.29■■■□□ 2.44
TMEM54-205ENST00000475208 USP17L17D6RBQ6 530 aa30.29■■■□□ 2.44
TMEM54-205ENST00000475208 USP17L19D6RCP7 530 aa30.29■■■□□ 2.44
TMEM54-205ENST00000475208 USP17L20D6RJB6 530 aa30.29■■■□□ 2.44
TMEM54-205ENST00000475208 CACNB2Q08289 660 aaPredicted RBP30.29■■■□□ 2.44
TMEM54-205ENST00000475208 USP17L24Q0WX57 530 aa30.29■■■□□ 2.44
TMEM54-205ENST00000475208 CCL14Q16627 93 aa30.29■■■□□ 2.44
TMEM54-205ENST00000475208 ABCB5Q2M3G0 1257 aa30.29■■■□□ 2.44
TMEM54-205ENST00000475208 CERKLQ49MI3 558 aaPredicted RBP30.29■■■□□ 2.44
TMEM54-205ENST00000475208 APBA2Q99767 749 aa30.29■■■□□ 2.44
TMEM54-205ENST00000475208 CWC22Q9HCG8 908 aaKnown RBP30.29■■■□□ 2.44
TMEM54-205ENST00000475208 RABGAP1Q9Y3P9 1069 aa30.29■■■□□ 2.44
TMEM54-205ENST00000475208 SOX1O00570 391 aaPredicted RBP30.28■■■□□ 2.44
TMEM54-205ENST00000475208 USP14P54578 494 aa30.28■■■□□ 2.44
TMEM54-205ENST00000475208 RIOK1Q9BRS2 568 aaKnown RBP30.28■■■□□ 2.44
TMEM54-205ENST00000475208 KIAA1683Q9H0B3 1180 aa30.28■■■□□ 2.44
TMEM54-205ENST00000475208 CNMDO75829 334 aa30.27■■■□□ 2.44
TMEM54-205ENST00000475208 ACER1Q8TDN7 264 aa30.27■■■□□ 2.44
TMEM54-205ENST00000475208 PANK1Q8TE04 598 aa30.27■■■□□ 2.44
TMEM54-205ENST00000475208 GDF15Q99988 308 aa30.27■■■□□ 2.44
TMEM54-205ENST00000475208 IL1RAPL2Q9NP60 686 aa30.27■■■□□ 2.44
TMEM54-205ENST00000475208 PFASO15067 1338 aa30.26■■■□□ 2.44
TMEM54-205ENST00000475208 LAMA3Q16787 3333 aa30.26■■■□□ 2.44
TMEM54-205ENST00000475208 VCAM1P19320 739 aa30.26■■■□□ 2.43
TMEM54-205ENST00000475208 SHMT1P34896 483 aa30.26■■■□□ 2.43
TMEM54-205ENST00000475208 PLCD1P51178 756 aa30.26■■■□□ 2.43
TMEM54-205ENST00000475208 CCNA1P78396 465 aa30.26■■■□□ 2.43
TMEM54-205ENST00000475208 CATSPERGQ6ZRH7 1159 aa30.26■■■□□ 2.43
TMEM54-205ENST00000475208 CABP5Q9NP86 173 aa30.26■■■□□ 2.43
TMEM54-205ENST00000475208 NAV1Q8NEY1 1877 aa30.25■■■□□ 2.43
TMEM54-205ENST00000475208 MAGEB6P1A0A0J9YX57 407 aa30.25■■■□□ 2.43
TMEM54-205ENST00000475208 SYN1P17600 705 aa30.25■■■□□ 2.43
TMEM54-205ENST00000475208 CCND3P30281 292 aaPredicted RBP30.25■■■□□ 2.43
TMEM54-205ENST00000475208 MAP2K5Q13163 448 aa30.25■■■□□ 2.43
TMEM54-205ENST00000475208 LRCH3Q96II8 777 aa30.25■■■□□ 2.43
TMEM54-205ENST00000475208 BMP8BP34820 402 aa30.24■■■□□ 2.43
TMEM54-205ENST00000475208 TTF1Q15361 905 aaPredicted RBP30.24■■■□□ 2.43
TMEM54-205ENST00000475208 HSP90AB4PQ58FF6 505 aa30.24■■■□□ 2.43
TMEM54-205ENST00000475208 RHPN1Q8TCX5 695 aa30.24■■■□□ 2.43
TMEM54-205ENST00000475208 GLRX3O76003 335 aaKnown RBP30.23■■■□□ 2.43
TMEM54-205ENST00000475208 POLR3DP05423 398 aaPredicted RBP30.23■■■□□ 2.43
TMEM54-205ENST00000475208 WDR78Q5VTH9 848 aa30.23■■■□□ 2.43
TMEM54-205ENST00000475208 PDE6AP16499 860 aa30.22■■■□□ 2.43
TMEM54-205ENST00000475208 GUCY1A2P33402 732 aa30.22■■■□□ 2.43
TMEM54-205ENST00000475208 LHX8Q68G74 356 aa30.22■■■□□ 2.43
TMEM54-205ENST00000475208 EDC3Q96F86 508 aaKnown RBP30.22■■■□□ 2.43
TMEM54-205ENST00000475208 COL6A1P12109 1028 aa30.21■■■□□ 2.43
TMEM54-205ENST00000475208 GABPAQ06546 454 aa30.21■■■□□ 2.43
TMEM54-205ENST00000475208 SLC9C2Q5TAH2 1124 aa30.21■■■□□ 2.43
TMEM54-205ENST00000475208 LBX2Q6XYB7 198 aa30.21■■■□□ 2.43
TMEM54-205ENST00000475208 CRNKL1Q9BZJ0 848 aaKnown RBP30.21■■■□□ 2.43
TMEM54-205ENST00000475208 RPAP3Q9H6T3 665 aaPredicted RBP30.21■■■□□ 2.43
TMEM54-205ENST00000475208 BTBD7Q9P203 1132 aa30.21■■■□□ 2.43
TMEM54-205ENST00000475208 SPDYE16A6NNV3 312 aaPredicted RBP30.2■■■□□ 2.43
TMEM54-205ENST00000475208 MAGEA10P43363 369 aaPredicted RBP30.2■■■□□ 2.43
TMEM54-205ENST00000475208 SEPT2Q15019 361 aa30.2■■■□□ 2.43
TMEM54-205ENST00000475208 MCM9Q9NXL9 1143 aa30.2■■■□□ 2.43
TMEM54-205ENST00000475208 SLC15A5A6NIM6 579 aa30.19■■■□□ 2.42
TMEM54-205ENST00000475208 APBB1O00213 710 aa30.19■■■□□ 2.42
TMEM54-205ENST00000475208 PTPREP23469 700 aa30.19■■■□□ 2.42
TMEM54-205ENST00000475208 EVX2Q03828 476 aa30.19■■■□□ 2.42
TMEM54-205ENST00000475208 MIER1Q8N108 512 aa30.19■■■□□ 2.42
TMEM54-205ENST00000475208 CLASRPQ8N2M8 674 aaKnown RBP30.19■■■□□ 2.42
TMEM54-205ENST00000475208 DNAJC2Q99543 621 aaKnown RBP30.19■■■□□ 2.42
TMEM54-205ENST00000475208 FLRT1Q9NZU1 646 aa30.19■■■□□ 2.42
TMEM54-205ENST00000475208 ZNF532Q9HCE3 1301 aa30.19■■■□□ 2.42
TMEM54-205ENST00000475208 GOLIM4O00461 696 aa30.18■■■□□ 2.42
TMEM54-205ENST00000475208 MFSD14CQ5VZR4 134 aa30.18■■■□□ 2.42
TMEM54-205ENST00000475208 IVNS1ABPQ9Y6Y0 642 aa30.18■■■□□ 2.42
TMEM54-205ENST00000475208 MPHOSPH10O00566 681 aaKnown RBP30.17■■■□□ 2.42
TMEM54-205ENST00000475208 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.17■■■□□ 2.42
TMEM54-205ENST00000475208 SDR42E1Q8WUS8 393 aa30.17■■■□□ 2.42
TMEM54-205ENST00000475208 KIF1BPQ96EK5 621 aa30.17■■■□□ 2.42
TMEM54-205ENST00000475208 FRMPD3Q5JV73 1810 aa30.17■■■□□ 2.42
TMEM54-205ENST00000475208 GRB14Q14449 540 aa30.16■■■□□ 2.42
TMEM54-205ENST00000475208 LCORLQ8N3X6 602 aa30.16■■■□□ 2.42
TMEM54-205ENST00000475208 ZBED9Q6R2W3 1325 aa30.16■■■□□ 2.42
TMEM54-205ENST00000475208 A0A1W2PRG0 241 aa30.15■■■□□ 2.42
TMEM54-205ENST00000475208 TCRBV5S4A2TA0A5A2 114 aa30.15■■■□□ 2.42
TMEM54-205ENST00000475208 IFIT2P09913 472 aaKnown RBP30.15■■■□□ 2.42
TMEM54-205ENST00000475208 LRRC26Q2I0M4 334 aa30.15■■■□□ 2.42
TMEM54-205ENST00000475208 DCP1AQ9NPI6 582 aaPredicted RBP30.15■■■□□ 2.42
TMEM54-205ENST00000475208 HOXC6P09630 235 aa30.14■■■□□ 2.42
TMEM54-205ENST00000475208 CYP2D6P10635 497 aa30.14■■■□□ 2.42
TMEM54-205ENST00000475208 ATP2B2Q01814 1243 aa30.14■■■□□ 2.42
TMEM54-205ENST00000475208 NPLOC4Q8TAT6 608 aa30.14■■■□□ 2.42
TMEM54-205ENST00000475208 BCL11AQ9H165 835 aa30.14■■■□□ 2.42
TMEM54-205ENST00000475208 RPAP2Q8IXW5 612 aaPredicted RBP30.13■■■□□ 2.41
TMEM54-205ENST00000475208 TDHQ8IZJ6 230 aa30.13■■■□□ 2.41
TMEM54-205ENST00000475208 SLC44A5Q8NCS7 719 aa30.13■■■□□ 2.41
TMEM54-205ENST00000475208 TANGO6Q9C0B7 1094 aa30.13■■■□□ 2.41
TMEM54-205ENST00000475208 UBE2OQ9C0C9 1292 aaKnown RBP30.13■■■□□ 2.41
TMEM54-205ENST00000475208 DDX20Q9UHI6 824 aaKnown RBP30.13■■■□□ 2.41
TMEM54-205ENST00000475208 HMMRO75330 724 aa30.12■■■□□ 2.41
TMEM54-205ENST00000475208 MS4A1P11836 297 aa30.12■■■□□ 2.41
TMEM54-205ENST00000475208 CNGA1P29973 690 aa30.11■■■□□ 2.41
TMEM54-205ENST00000475208 CYP2C19P33261 490 aa30.11■■■□□ 2.41
TMEM54-205ENST00000475208 COG2Q14746 738 aa30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms