RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 EAPPQ56P03 285 aaPredicted RBP11.25□□□□□ -0.61
DDX39B-217ENST00000474961 RRP12Q5JTH9 1297 aaKnown RBP11.25□□□□□ -0.61
DDX39B-217ENST00000474961 C16orf86Q6ZW13 317 aa11.25□□□□□ -0.61
DDX39B-217ENST00000474961 PNMA8AQ86V59 439 aaPredicted RBP11.25□□□□□ -0.61
DDX39B-217ENST00000474961 SLC44A5Q8NCS7 719 aa11.25□□□□□ -0.61
DDX39B-217ENST00000474961 NCOA7Q8NI08 942 aa11.25□□□□□ -0.61
DDX39B-217ENST00000474961 ZC3H15Q8WU90 426 aaKnown RBP11.25□□□□□ -0.61
DDX39B-217ENST00000474961 DCPSQ96C86 337 aaKnown RBP11.25□□□□□ -0.61
DDX39B-217ENST00000474961 DEFB129Q9H1M3 183 aa11.25□□□□□ -0.61
DDX39B-217ENST00000474961 EHD4Q9H223 541 aa11.25□□□□□ -0.61
DDX39B-217ENST00000474961 PGAP2Q9UHJ9 254 aa11.25□□□□□ -0.61
DDX39B-217ENST00000474961 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.25□□□□□ -0.61
DDX39B-217ENST00000474961 NEDD4P46934 1319 aa11.25□□□□□ -0.61
DDX39B-217ENST00000474961 ORC4O43929 436 aa11.24□□□□□ -0.61
DDX39B-217ENST00000474961 PRDM1O75626 825 aa11.24□□□□□ -0.61
DDX39B-217ENST00000474961 SLURP2P0DP57 97 aa11.24□□□□□ -0.61
DDX39B-217ENST00000474961 PCP11498 1178 aaKnown RBP11.24□□□□□ -0.61
DDX39B-217ENST00000474961 BLOC1S2Q6QNY1 142 aa11.24□□□□□ -0.61
DDX39B-217ENST00000474961 RALYLQ86SE5 291 aaKnown RBP11.24□□□□□ -0.61
DDX39B-217ENST00000474961 METTL16Q86W50 562 aaKnown RBP11.24□□□□□ -0.61
DDX39B-217ENST00000474961 FOXP4Q8IVH2 680 aaPredicted RBP11.24□□□□□ -0.61
DDX39B-217ENST00000474961 MB21D2Q8IYB1 491 aaPredicted RBP11.24□□□□□ -0.61
DDX39B-217ENST00000474961 CRACR2BQ8N4Y2 399 aaPredicted RBP11.24□□□□□ -0.61
DDX39B-217ENST00000474961 NKX2-3Q8TAU0 364 aa11.24□□□□□ -0.61
DDX39B-217ENST00000474961 ZNF526Q8TF50 670 aaPredicted RBP11.24□□□□□ -0.61
DDX39B-217ENST00000474961 TEPSINQ96N21 525 aa11.24□□□□□ -0.61
DDX39B-217ENST00000474961 CSRNP1Q96S65 589 aa11.24□□□□□ -0.61
DDX39B-217ENST00000474961 UPF3BQ9BZI7 483 aaKnown RBP11.24□□□□□ -0.61
DDX39B-217ENST00000474961 KRT23Q9C075 422 aa11.24□□□□□ -0.61
DDX39B-217ENST00000474961 CNNM2Q9H8M5 875 aa11.24□□□□□ -0.61
DDX39B-217ENST00000474961 MKNK2Q9HBH9 465 aa11.24□□□□□ -0.61
DDX39B-217ENST00000474961 NMRK2Q9NPI5 230 aa11.24□□□□□ -0.61
DDX39B-217ENST00000474961 TOMM22Q9NS69 142 aa11.24□□□□□ -0.61
DDX39B-217ENST00000474961 SERPINB13Q9UIV8 391 aa11.24□□□□□ -0.61
DDX39B-217ENST00000474961 RBM19Q9Y4C8 960 aaKnown RBP11.24□□□□□ -0.61
DDX39B-217ENST00000474961 CYP46A1Q9Y6A2 500 aa11.24□□□□□ -0.61
DDX39B-217ENST00000474961 FAM196BA6NMK8 535 aa11.23□□□□□ -0.61
DDX39B-217ENST00000474961 HMGB1P09429 215 aaKnown RBP11.23□□□□□ -0.61
DDX39B-217ENST00000474961 RPS6KB1P23443 525 aa11.23□□□□□ -0.61
DDX39B-217ENST00000474961 SHMT1P34896 483 aa11.23□□□□□ -0.61
DDX39B-217ENST00000474961 NEK4P51957 841 aa11.23□□□□□ -0.61
DDX39B-217ENST00000474961 RUFY3Q7L099 469 aa11.23□□□□□ -0.61
DDX39B-217ENST00000474961 CYB5R4Q7L1T6 521 aa11.23□□□□□ -0.61
DDX39B-217ENST00000474961 DHX32Q7L7V1 743 aaKnown RBP11.23□□□□□ -0.61
DDX39B-217ENST00000474961 SULF1Q8IWU6 871 aa11.23□□□□□ -0.61
DDX39B-217ENST00000474961 TRIM34Q9BYJ4 488 aa11.23□□□□□ -0.61
DDX39B-217ENST00000474961 ZNF287Q9HBT7 754 aa11.23□□□□□ -0.61
DDX39B-217ENST00000474961 SWAP70Q9UH65 585 aa11.23□□□□□ -0.61
DDX39B-217ENST00000474961 PPP2R3BQ9Y5P8 575 aa11.23□□□□□ -0.61
DDX39B-217ENST00000474961 TULP1O00294 542 aaPredicted RBP11.22□□□□□ -0.61
DDX39B-217ENST00000474961 RANBP6O60518 1105 aaKnown RBP11.22□□□□□ -0.61
DDX39B-217ENST00000474961 KDM4AO75164 1064 aa11.22□□□□□ -0.61
DDX39B-217ENST00000474961 RASA1P20936 1047 aa11.22□□□□□ -0.61
DDX39B-217ENST00000474961 MCM5P33992 734 aa11.22□□□□□ -0.61
DDX39B-217ENST00000474961 ANTXR2P58335 489 aa11.22□□□□□ -0.61
DDX39B-217ENST00000474961 EXOSC10Q01780 885 aaKnown RBP11.22□□□□□ -0.61
DDX39B-217ENST00000474961 NBPF12Q5TAG4 269 aaPredicted RBP11.22□□□□□ -0.61
DDX39B-217ENST00000474961 PRAMEF18Q5VWM3 479 aa11.22□□□□□ -0.61
DDX39B-217ENST00000474961 CHST3Q7LGC8 479 aa11.22□□□□□ -0.61
DDX39B-217ENST00000474961 KRT26Q7Z3Y9 468 aa11.22□□□□□ -0.61
DDX39B-217ENST00000474961 USP48Q86UV5 1035 aa11.22□□□□□ -0.61
DDX39B-217ENST00000474961 ZNF444Q8N0Y2 327 aaPredicted RBP11.22□□□□□ -0.61
DDX39B-217ENST00000474961 ESR2Q92731 530 aa11.22□□□□□ -0.61
DDX39B-217ENST00000474961 ATAD5Q96QE3 1844 aa11.22□□□□□ -0.61
DDX39B-217ENST00000474961 KCNK17Q96T54 332 aa11.22□□□□□ -0.61
DDX39B-217ENST00000474961 ADAM33Q9BZ11 813 aa11.22□□□□□ -0.61
DDX39B-217ENST00000474961 DNAJC18Q9H819 358 aa11.22□□□□□ -0.61
DDX39B-217ENST00000474961 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.22□□□□□ -0.61
DDX39B-217ENST00000474961 PDRG1Q9NUG6 133 aa11.22□□□□□ -0.61
DDX39B-217ENST00000474961 ZSWIM5Q9P217 1185 aa11.22□□□□□ -0.61
DDX39B-217ENST00000474961 HERC5Q9UII4 1024 aaKnown RBP11.22□□□□□ -0.61
DDX39B-217ENST00000474961 ADM5C9JUS6 153 aa11.21□□□□□ -0.61
DDX39B-217ENST00000474961 MAP3K7O43318 606 aa11.21□□□□□ -0.61
DDX39B-217ENST00000474961 PRC1O43663 620 aa11.21□□□□□ -0.61
DDX39B-217ENST00000474961 C1QTNF8P60827 252 aa11.21□□□□□ -0.61
DDX39B-217ENST00000474961 TFAP4Q01664 338 aa11.21□□□□□ -0.61
DDX39B-217ENST00000474961 MAP3K10Q02779 954 aa11.21□□□□□ -0.61
DDX39B-217ENST00000474961 FAM47AQ5JRC9 791 aa11.21□□□□□ -0.61
DDX39B-217ENST00000474961 DLK2Q6UY11 383 aa11.21□□□□□ -0.61
DDX39B-217ENST00000474961 MIGA2Q7L4E1 593 aa11.21□□□□□ -0.61
DDX39B-217ENST00000474961 TCEANC2Q96MN5 208 aa11.21□□□□□ -0.61
DDX39B-217ENST00000474961 TTC14Q96N46 770 aa11.21□□□□□ -0.61
DDX39B-217ENST00000474961 LRRC2Q9BYS8 371 aa11.21□□□□□ -0.61
DDX39B-217ENST00000474961 GREB1LQ9C091 1923 aaPredicted RBP11.21□□□□□ -0.62
DDX39B-217ENST00000474961 MYH4Q9Y623 1939 aa11.21□□□□□ -0.62
DDX39B-217ENST00000474961 WDR19Q8NEZ3 1342 aa11.2□□□□□ -0.62
DDX39B-217ENST00000474961 TSPY2A6NKD2 308 aa11.2□□□□□ -0.62
DDX39B-217ENST00000474961 AKR1B1P15121 316 aa11.2□□□□□ -0.62
DDX39B-217ENST00000474961 NT5C2P49902 561 aa11.2□□□□□ -0.62
DDX39B-217ENST00000474961 SUPT20HL1Q3ZLR7 823 aa11.2□□□□□ -0.62
DDX39B-217ENST00000474961 CERKLQ49MI3 558 aaPredicted RBP11.2□□□□□ -0.62
DDX39B-217ENST00000474961 MAP1SQ66K74 1059 aaPredicted RBP11.2□□□□□ -0.62
DDX39B-217ENST00000474961 TATDN1Q6P1N9 297 aa11.2□□□□□ -0.62
DDX39B-217ENST00000474961 Q6ZUG5 572 aa11.2□□□□□ -0.62
DDX39B-217ENST00000474961 CDC37L1Q7L3B6 337 aa11.2□□□□□ -0.62
DDX39B-217ENST00000474961 LDHDQ86WU2 507 aa11.2□□□□□ -0.62
DDX39B-217ENST00000474961 IL27Q8NEV9 243 aa11.2□□□□□ -0.62
DDX39B-217ENST00000474961 HOOK2Q96ED9 719 aa11.2□□□□□ -0.62
DDX39B-217ENST00000474961 GLIS2Q9BZE0 524 aaPredicted RBP11.2□□□□□ -0.62
DDX39B-217ENST00000474961 ALDH8A1Q9H2A2 487 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms