RNA–Protein interactions for RNA: ENST00000474887.5

DNMT3A-211, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-211ENST00000474887 RBPJLQ9UBG7 517 aa16.9■□□□□ 0.3
DNMT3A-211ENST00000474887 ATAD5Q96QE3 1844 aa16.9■□□□□ 0.3
DNMT3A-211ENST00000474887 MYH1P12882 1939 aa16.9■□□□□ 0.3
DNMT3A-211ENST00000474887 MYCP01106 439 aaPredicted RBP16.89■□□□□ 0.29
DNMT3A-211ENST00000474887 HMGCRP04035 888 aa16.89■□□□□ 0.29
DNMT3A-211ENST00000474887 INHAP05111 366 aa16.89■□□□□ 0.29
DNMT3A-211ENST00000474887 AAMPQ13685 434 aa16.89■□□□□ 0.29
DNMT3A-211ENST00000474887 CATSPERGQ6ZRH7 1159 aa16.89■□□□□ 0.29
DNMT3A-211ENST00000474887 NUDT12Q9BQG2 462 aa16.89■□□□□ 0.29
DNMT3A-211ENST00000474887 HTATIP2Q9BUP3 242 aa16.89■□□□□ 0.29
DNMT3A-211ENST00000474887 SH2D4AQ9H788 454 aa16.89■□□□□ 0.29
DNMT3A-211ENST00000474887 ARMT1Q9H993 441 aa16.89■□□□□ 0.29
DNMT3A-211ENST00000474887 HOXC10Q9NYD6 342 aa16.89■□□□□ 0.29
DNMT3A-211ENST00000474887 MGAMO43451 1857 aa16.88■□□□□ 0.29
DNMT3A-211ENST00000474887 MBD4O95243 580 aa16.88■□□□□ 0.29
DNMT3A-211ENST00000474887 ERVK-9P63128 1117 aa16.88■□□□□ 0.29
DNMT3A-211ENST00000474887 ERVK-24P63145 666 aa16.88■□□□□ 0.29
DNMT3A-211ENST00000474887 C12orf60Q5U649 245 aa16.88■□□□□ 0.29
DNMT3A-211ENST00000474887 KBTBD3Q8NAB2 608 aa16.88■□□□□ 0.29
DNMT3A-211ENST00000474887 U2AF1L4Q8WU68 220 aaKnown RBP16.88■□□□□ 0.29
DNMT3A-211ENST00000474887 SDR42E1Q8WUS8 393 aa16.88■□□□□ 0.29
DNMT3A-211ENST00000474887 LPAR1Q92633 364 aa16.88■□□□□ 0.29
DNMT3A-211ENST00000474887 EDC3Q96F86 508 aaKnown RBP16.88■□□□□ 0.29
DNMT3A-211ENST00000474887 UNC93B1Q9H1C4 597 aa16.88■□□□□ 0.29
DNMT3A-211ENST00000474887 PAK6Q9NQU5 681 aaPredicted RBP16.88■□□□□ 0.29
DNMT3A-211ENST00000474887 ERC2O15083 957 aa16.87■□□□□ 0.29
DNMT3A-211ENST00000474887 ELNP15502 786 aa16.87■□□□□ 0.29
DNMT3A-211ENST00000474887 UBE2Q1Q7Z7E8 422 aa16.87■□□□□ 0.29
DNMT3A-211ENST00000474887 ANKLE1Q8NAG6 615 aa16.87■□□□□ 0.29
DNMT3A-211ENST00000474887 BCL11AQ9H165 835 aa16.87■□□□□ 0.29
DNMT3A-211ENST00000474887 TTC41PQ6P2S7 1318 aa16.87■□□□□ 0.29
DNMT3A-211ENST00000474887 ZSWIM8A7E2V4 1837 aa16.86■□□□□ 0.29
DNMT3A-211ENST00000474887 MPHOSPH10O00566 681 aaKnown RBP16.86■□□□□ 0.29
DNMT3A-211ENST00000474887 SMARCA5O60264 1052 aaPredicted RBP16.86■□□□□ 0.29
DNMT3A-211ENST00000474887 GNAT2P19087 354 aa16.86■□□□□ 0.29
DNMT3A-211ENST00000474887 VCAM1P19320 739 aa16.86■□□□□ 0.29
DNMT3A-211ENST00000474887 GUCY1A2P33402 732 aa16.86■□□□□ 0.29
DNMT3A-211ENST00000474887 COG2Q14746 738 aa16.86■□□□□ 0.29
DNMT3A-211ENST00000474887 SEPT2Q15019 361 aa16.86■□□□□ 0.29
DNMT3A-211ENST00000474887 SHROOM1Q2M3G4 852 aaPredicted RBP16.86■□□□□ 0.29
DNMT3A-211ENST00000474887 PLEKHH3Q7Z736 793 aa16.86■□□□□ 0.29
DNMT3A-211ENST00000474887 ACER1Q8TDN7 264 aa16.86■□□□□ 0.29
DNMT3A-211ENST00000474887 SHISA4Q96DD7 197 aa16.86■□□□□ 0.29
DNMT3A-211ENST00000474887 CRISPLD2Q9H0B8 497 aa16.86■□□□□ 0.29
DNMT3A-211ENST00000474887 ARHGEF10LQ9HCE6 1279 aa16.86■□□□□ 0.29
DNMT3A-211ENST00000474887 TXNRD2Q9NNW7 524 aa16.86■□□□□ 0.29
DNMT3A-211ENST00000474887 HMX1Q9NP08 348 aaPredicted RBP16.86■□□□□ 0.29
DNMT3A-211ENST00000474887 SLC4A4Q9Y6R1 1079 aa16.86■□□□□ 0.29
DNMT3A-211ENST00000474887 RPTORQ8N122 1335 aa16.86■□□□□ 0.29
DNMT3A-211ENST00000474887 MKI67P46013 3256 aaKnown RBP16.85■□□□□ 0.29
DNMT3A-211ENST00000474887 USP17L12C9JPN9 530 aa16.85■□□□□ 0.29
DNMT3A-211ENST00000474887 USP17L21D6R901 530 aa16.85■□□□□ 0.29
DNMT3A-211ENST00000474887 TFRCP02786 760 aaKnown RBP16.85■□□□□ 0.29
DNMT3A-211ENST00000474887 RGS2P41220 211 aa16.85■□□□□ 0.29
DNMT3A-211ENST00000474887 SBK1Q52WX2 424 aa16.85■□□□□ 0.29
DNMT3A-211ENST00000474887 TICAM2Q86XR7 235 aa16.85■□□□□ 0.29
DNMT3A-211ENST00000474887 MB21D1Q8N884 522 aa16.85■□□□□ 0.29
DNMT3A-211ENST00000474887 APPBP2Q92624 585 aa16.85■□□□□ 0.29
DNMT3A-211ENST00000474887 USP6NLQ92738 828 aa16.85■□□□□ 0.29
DNMT3A-211ENST00000474887 STRBPQ96SI9 672 aaKnown RBP16.85■□□□□ 0.29
DNMT3A-211ENST00000474887 KANSL2Q9H9L4 492 aa16.85■□□□□ 0.29
DNMT3A-211ENST00000474887 ZNF287Q9HBT7 754 aa16.85■□□□□ 0.29
DNMT3A-211ENST00000474887 ARPP21Q9UBL0 812 aaPredicted RBP16.85■□□□□ 0.29
DNMT3A-211ENST00000474887 ZBTB47Q9UFB7 747 aaPredicted RBP16.85■□□□□ 0.29
DNMT3A-211ENST00000474887 RNF113AO15541 343 aaKnown RBP16.84■□□□□ 0.29
DNMT3A-211ENST00000474887 PRKAB2O43741 272 aa16.84■□□□□ 0.29
DNMT3A-211ENST00000474887 FARP2O94887 1054 aaPredicted RBP16.84■□□□□ 0.29
DNMT3A-211ENST00000474887 CDK8P49336 464 aa16.84■□□□□ 0.29
DNMT3A-211ENST00000474887 Q3C1V9 767 aa16.84■□□□□ 0.29
DNMT3A-211ENST00000474887 MORN1Q5T089 497 aa16.84■□□□□ 0.29
DNMT3A-211ENST00000474887 C16orf86Q6ZW13 317 aa16.84■□□□□ 0.29
DNMT3A-211ENST00000474887 DEFB118Q96PH6 123 aa16.84■□□□□ 0.29
DNMT3A-211ENST00000474887 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.84■□□□□ 0.29
DNMT3A-211ENST00000474887 RPAP3Q9H6T3 665 aaPredicted RBP16.84■□□□□ 0.29
DNMT3A-211ENST00000474887 CWC22Q9HCG8 908 aaKnown RBP16.84■□□□□ 0.29
DNMT3A-211ENST00000474887 TMX2Q9Y320 296 aa16.84■□□□□ 0.29
DNMT3A-211ENST00000474887 NR2E3Q9Y5X4 410 aa16.84■□□□□ 0.29
DNMT3A-211ENST00000474887 SLC15A5A6NIM6 579 aa16.83■□□□□ 0.28
DNMT3A-211ENST00000474887 STRNO43815 780 aa16.83■□□□□ 0.28
DNMT3A-211ENST00000474887 RRP1P56182 461 aaKnown RBP16.83■□□□□ 0.28
DNMT3A-211ENST00000474887 ZYXQ15942 572 aaKnown RBP16.83■□□□□ 0.28
DNMT3A-211ENST00000474887 MAP3K21Q5TCX8 1036 aa16.83■□□□□ 0.28
DNMT3A-211ENST00000474887 GPR142Q7Z601 462 aa16.83■□□□□ 0.28
DNMT3A-211ENST00000474887 PAGR1Q9BTK6 254 aa16.83■□□□□ 0.28
DNMT3A-211ENST00000474887 PUS7LQ9H0K6 701 aaKnown RBP16.83■□□□□ 0.28
DNMT3A-211ENST00000474887 PCDHB15Q9Y5E8 787 aa16.83■□□□□ 0.28
DNMT3A-211ENST00000474887 HOXC6P09630 235 aa16.82■□□□□ 0.28
DNMT3A-211ENST00000474887 CYP2D6P10635 497 aa16.82■□□□□ 0.28
DNMT3A-211ENST00000474887 ZKSCAN1P17029 563 aaPredicted RBP16.82■□□□□ 0.28
DNMT3A-211ENST00000474887 CTR9Q6PD62 1173 aa16.82■□□□□ 0.28
DNMT3A-211ENST00000474887 SHCBP1Q8NEM2 672 aa16.82■□□□□ 0.28
DNMT3A-211ENST00000474887 DPF3Q92784 378 aa16.82■□□□□ 0.28
DNMT3A-211ENST00000474887 IVNS1ABPQ9Y6Y0 642 aa16.82■□□□□ 0.28
DNMT3A-211ENST00000474887 CEP290O15078 2479 aa16.82■□□□□ 0.28
DNMT3A-211ENST00000474887 DOCK3Q8IZD9 2030 aa16.82■□□□□ 0.28
DNMT3A-211ENST00000474887 A0A1W2PRG0 241 aa16.81■□□□□ 0.28
DNMT3A-211ENST00000474887 CYP2B6P20813 491 aa16.81■□□□□ 0.28
DNMT3A-211ENST00000474887 ICA1Q05084 483 aa16.81■□□□□ 0.28
DNMT3A-211ENST00000474887 MAP2K5Q13163 448 aa16.81■□□□□ 0.28
DNMT3A-211ENST00000474887 NECAB2Q7Z6G3 386 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms