RNA–Protein interactions for RNA: ENST00000474873.5

HPS1-210, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 2

Gene HPS1, Length 698 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-210ENST00000474873 KANSL2Q9H9L4 492 aa9.54□□□□□ -0.88
HPS1-210ENST00000474873 CTNNA3Q9UI47 895 aa9.54□□□□□ -0.88
HPS1-210ENST00000474873 SLC45A1Q9Y2W3 748 aa9.54□□□□□ -0.88
HPS1-210ENST00000474873 PDHXO00330 501 aa9.53□□□□□ -0.88
HPS1-210ENST00000474873 PRDM1O75626 825 aa9.53□□□□□ -0.88
HPS1-210ENST00000474873 TBC1D8O95759 1140 aa9.53□□□□□ -0.88
HPS1-210ENST00000474873 HSPA8P11142 646 aaKnown RBP9.53□□□□□ -0.88
HPS1-210ENST00000474873 PCP11498 1178 aaKnown RBP9.53□□□□□ -0.88
HPS1-210ENST00000474873 LBX1P52954 281 aa9.53□□□□□ -0.88
HPS1-210ENST00000474873 USP14P54578 494 aa9.53□□□□□ -0.88
HPS1-210ENST00000474873 HMGCS2P54868 508 aa9.53□□□□□ -0.88
HPS1-210ENST00000474873 CTDSPL2Q05D32 466 aa9.53□□□□□ -0.88
HPS1-210ENST00000474873 MTMR2Q13614 643 aa9.53□□□□□ -0.88
HPS1-210ENST00000474873 USP17L2Q6R6M4 530 aa9.53□□□□□ -0.88
HPS1-210ENST00000474873 CASC1Q6TDU7 716 aa9.53□□□□□ -0.88
HPS1-210ENST00000474873 GADL1Q6ZQY3 521 aa9.53□□□□□ -0.88
HPS1-210ENST00000474873 STK11IPQ8N1F8 1099 aa9.53□□□□□ -0.88
HPS1-210ENST00000474873 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.53□□□□□ -0.88
HPS1-210ENST00000474873 KIAA1683Q9H0B3 1180 aa9.53□□□□□ -0.88
HPS1-210ENST00000474873 IL25Q9H293 177 aa9.53□□□□□ -0.88
HPS1-210ENST00000474873 TMOD4Q9NZQ9 345 aa9.53□□□□□ -0.88
HPS1-210ENST00000474873 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.53□□□□□ -0.88
HPS1-210ENST00000474873 PHIPQ8WWQ0 1821 aa9.53□□□□□ -0.88
HPS1-210ENST00000474873 ATAD5Q96QE3 1844 aa9.53□□□□□ -0.88
HPS1-210ENST00000474873 ZNF213O14771 459 aa9.52□□□□□ -0.89
HPS1-210ENST00000474873 ORC4O43929 436 aa9.52□□□□□ -0.89
HPS1-210ENST00000474873 CDC45O75419 566 aa9.52□□□□□ -0.89
HPS1-210ENST00000474873 NT5C2P49902 561 aa9.52□□□□□ -0.89
HPS1-210ENST00000474873 ICA1Q05084 483 aa9.52□□□□□ -0.89
HPS1-210ENST00000474873 PABPC4Q13310 644 aaKnown RBP eCLIP9.52□□□□□ -0.894e-7■■■□□ 17.1
HPS1-210ENST00000474873 CRHR2Q13324 411 aa9.52□□□□□ -0.89
HPS1-210ENST00000474873 TAF1CQ15572 869 aaPredicted RBP9.52□□□□□ -0.89
HPS1-210ENST00000474873 IMMTQ16891 758 aaKnown RBP9.52□□□□□ -0.89
HPS1-210ENST00000474873 MFSD6Q6ZSS7 791 aa9.52□□□□□ -0.89
HPS1-210ENST00000474873 KIAA1211Q6ZU35 1233 aa9.52□□□□□ -0.89
HPS1-210ENST00000474873 SIAH1Q8IUQ4 282 aa9.52□□□□□ -0.89
HPS1-210ENST00000474873 NEDD1Q8NHV4 660 aa9.52□□□□□ -0.89
HPS1-210ENST00000474873 ACER1Q8TDN7 264 aa9.52□□□□□ -0.89
HPS1-210ENST00000474873 C12orf42Q96LP6 360 aa9.52□□□□□ -0.89
HPS1-210ENST00000474873 FEZ1Q99689 392 aa9.52□□□□□ -0.89
HPS1-210ENST00000474873 ESYT1Q9BSJ8 1104 aa9.52□□□□□ -0.89
HPS1-210ENST00000474873 RNF41Q9H4P4 317 aaPredicted RBP9.52□□□□□ -0.89
HPS1-210ENST00000474873 SH2D4AQ9H788 454 aa9.52□□□□□ -0.89
HPS1-210ENST00000474873 ZFYVE28Q9HCC9 887 aa9.52□□□□□ -0.89
HPS1-210ENST00000474873 EMILIN3Q9NT22 766 aa9.52□□□□□ -0.89
HPS1-210ENST00000474873 TSKSQ9UJT2 592 aa9.52□□□□□ -0.89
HPS1-210ENST00000474873 AGTPBP1Q9UPW5 1226 aa9.52□□□□□ -0.89
HPS1-210ENST00000474873 IGKV6D-41A0A0C4DH26 115 aa9.51□□□□□ -0.89
HPS1-210ENST00000474873 A0A1W2PRG0 241 aa9.51□□□□□ -0.89
HPS1-210ENST00000474873 GPR25O00155 361 aa9.51□□□□□ -0.89
HPS1-210ENST00000474873 TLR2O60603 784 aa9.51□□□□□ -0.89
HPS1-210ENST00000474873 TSPY3P0CV98 308 aa9.51□□□□□ -0.89
HPS1-210ENST00000474873 TSPY8P0CW00 308 aa9.51□□□□□ -0.89
HPS1-210ENST00000474873 EEF2P13639 858 aaKnown RBP9.51□□□□□ -0.89
HPS1-210ENST00000474873 HOXA7P31268 230 aaPredicted RBP9.51□□□□□ -0.89
HPS1-210ENST00000474873 HAND2P61296 217 aa9.51□□□□□ -0.89
HPS1-210ENST00000474873 TFAP4Q01664 338 aa9.51□□□□□ -0.89
HPS1-210ENST00000474873 PTH1RQ03431 593 aa9.51□□□□□ -0.89
HPS1-210ENST00000474873 PPP4R3BQ5MIZ7 849 aa9.51□□□□□ -0.89
HPS1-210ENST00000474873 AKNAD1Q5T1N1 836 aa9.51□□□□□ -0.89
HPS1-210ENST00000474873 TREML2Q5T2D2 321 aa9.51□□□□□ -0.89
HPS1-210ENST00000474873 STAG1Q8WVM7 1258 aa9.51□□□□□ -0.89
HPS1-210ENST00000474873 MAP4K1Q92918 833 aa9.51□□□□□ -0.89
HPS1-210ENST00000474873 PARK7Q99497 189 aaKnown RBP9.51□□□□□ -0.89
HPS1-210ENST00000474873 NBPF3Q9H094 633 aa9.51□□□□□ -0.89
HPS1-210ENST00000474873 R3HDMLQ9H3Y0 253 aa9.51□□□□□ -0.89
HPS1-210ENST00000474873 ARHGEF10LQ9HCE6 1279 aa9.51□□□□□ -0.89
HPS1-210ENST00000474873 INCENPQ9NQS7 918 aa9.51□□□□□ -0.89
HPS1-210ENST00000474873 NYAP2Q9P242 653 aa9.51□□□□□ -0.89
HPS1-210ENST00000474873 PNMA3Q9UL41 463 aa9.51□□□□□ -0.89
HPS1-210ENST00000474873 TMX2Q9Y320 296 aa9.51□□□□□ -0.89
HPS1-210ENST00000474873 U3KPZ7 1027 aaPredicted RBP9.51□□□□□ -0.89
HPS1-210ENST00000474873 MYH8P13535 1937 aa9.5□□□□□ -0.89
HPS1-210ENST00000474873 TSPY2A6NKD2 308 aa9.5□□□□□ -0.89
HPS1-210ENST00000474873 RANBP6O60518 1105 aaKnown RBP9.5□□□□□ -0.89
HPS1-210ENST00000474873 OSBPP22059 807 aa9.5□□□□□ -0.89
HPS1-210ENST00000474873 FAM47AQ5JRC9 791 aa9.5□□□□□ -0.89
HPS1-210ENST00000474873 PRPF38BQ5VTL8 546 aaKnown RBP9.5□□□□□ -0.89
HPS1-210ENST00000474873 LPAR1Q92633 364 aa9.5□□□□□ -0.89
HPS1-210ENST00000474873 MKL1Q969V6 931 aa9.5□□□□□ -0.89
HPS1-210ENST00000474873 MTMR4Q9NYA4 1195 aa9.5□□□□□ -0.89
HPS1-210ENST00000474873 SYNPO2Q9UMS6 1093 aa9.5□□□□□ -0.89
HPS1-210ENST00000474873 TACC3Q9Y6A5 838 aa9.5□□□□□ -0.89
HPS1-210ENST00000474873 PTPRFP10586 1907 aa9.5□□□□□ -0.89
HPS1-210ENST00000474873 PLIN4Q96Q06 1357 aa9.5□□□□□ -0.89
HPS1-210ENST00000474873 USP17L15C9J2P7 530 aa9.49□□□□□ -0.89
HPS1-210ENST00000474873 USP17L13C9JLJ4 530 aa9.49□□□□□ -0.89
HPS1-210ENST00000474873 USP17L11C9JVI0 530 aa9.49□□□□□ -0.89
HPS1-210ENST00000474873 USP17L18D6R9N7 530 aa9.49□□□□□ -0.89
HPS1-210ENST00000474873 USP17L22D6RA61 530 aa9.49□□□□□ -0.89
HPS1-210ENST00000474873 USP17L17D6RBQ6 530 aa9.49□□□□□ -0.89
HPS1-210ENST00000474873 USP17L19D6RCP7 530 aa9.49□□□□□ -0.89
HPS1-210ENST00000474873 USP17L20D6RJB6 530 aa9.49□□□□□ -0.89
HPS1-210ENST00000474873 DLL1O00548 723 aa9.49□□□□□ -0.89
HPS1-210ENST00000474873 FKTNO75072 461 aa9.49□□□□□ -0.89
HPS1-210ENST00000474873 TTLL1O95922 423 aa9.49□□□□□ -0.89
HPS1-210ENST00000474873 CYP2C8P10632 490 aa9.49□□□□□ -0.89
HPS1-210ENST00000474873 VCAM1P19320 739 aa9.49□□□□□ -0.89
HPS1-210ENST00000474873 ATP2B2Q01814 1243 aa9.49□□□□□ -0.89
HPS1-210ENST00000474873 USP17L24Q0WX57 530 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms