RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 C19orf81C9J6K1 198 aa20.14■□□□□ 0.81
SCAF11-206ENST00000474828 CDC45O75419 566 aa20.14■□□□□ 0.81
SCAF11-206ENST00000474828 NOVP48745 357 aa20.14■□□□□ 0.81
SCAF11-206ENST00000474828 FASTKD5Q7L8L6 764 aaKnown RBP20.14■□□□□ 0.81
SCAF11-206ENST00000474828 PROCA1Q8NCQ7 364 aaPredicted RBP20.14■□□□□ 0.81
SCAF11-206ENST00000474828 C12orf42Q96LP6 360 aa20.14■□□□□ 0.81
SCAF11-206ENST00000474828 KIAA1683Q9H0B3 1180 aa20.14■□□□□ 0.81
SCAF11-206ENST00000474828 CTNNA3Q9UI47 895 aa20.14■□□□□ 0.81
SCAF11-206ENST00000474828 BTBD19C9JJ37 291 aa20.13■□□□□ 0.81
SCAF11-206ENST00000474828 PTH1RQ03431 593 aa20.13■□□□□ 0.81
SCAF11-206ENST00000474828 SEPT2Q15019 361 aa20.13■□□□□ 0.81
SCAF11-206ENST00000474828 FAM43AQ8N2R8 423 aa20.13■□□□□ 0.81
SCAF11-206ENST00000474828 NEDD1Q8NHV4 660 aa20.13■□□□□ 0.81
SCAF11-206ENST00000474828 STAG1Q8WVM7 1258 aa20.13■□□□□ 0.81
SCAF11-206ENST00000474828 MKNK2Q9HBH9 465 aa20.13■□□□□ 0.81
SCAF11-206ENST00000474828 MYH8P13535 1937 aa20.12■□□□□ 0.81
SCAF11-206ENST00000474828 TRIM75PA6NK02 468 aa20.12■□□□□ 0.81
SCAF11-206ENST00000474828 USP17L10C9JJH3 530 aa20.12■□□□□ 0.81
SCAF11-206ENST00000474828 LBX1P52954 281 aa20.12■□□□□ 0.81
SCAF11-206ENST00000474828 CTDSPL2Q05D32 466 aa20.12■□□□□ 0.81
SCAF11-206ENST00000474828 OTUD7BQ6GQQ9 843 aa20.12■□□□□ 0.81
SCAF11-206ENST00000474828 LSG1Q9H089 658 aaKnown RBP20.12■□□□□ 0.81
SCAF11-206ENST00000474828 KANSL2Q9H9L4 492 aa20.12■□□□□ 0.81
SCAF11-206ENST00000474828 SYNPO2Q9UMS6 1093 aa20.12■□□□□ 0.81
SCAF11-206ENST00000474828 A0A1W2PRG0 241 aa20.11■□□□□ 0.81
SCAF11-206ENST00000474828 AKNAD1Q5T1N1 836 aa20.11■□□□□ 0.81
SCAF11-206ENST00000474828 TBC1D10CQ8IV04 446 aa20.11■□□□□ 0.81
SCAF11-206ENST00000474828 TMX2Q9Y320 296 aa20.11■□□□□ 0.81
SCAF11-206ENST00000474828 U3KPZ7 1027 aaPredicted RBP20.11■□□□□ 0.81
SCAF11-206ENST00000474828 ZNF213O14771 459 aa20.1■□□□□ 0.81
SCAF11-206ENST00000474828 HOXA7P31268 230 aaPredicted RBP20.1■□□□□ 0.81
SCAF11-206ENST00000474828 RAB3GAP1Q15042 981 aa20.1■□□□□ 0.81
SCAF11-206ENST00000474828 ZNF444Q8N0Y2 327 aaPredicted RBP20.1■□□□□ 0.81
SCAF11-206ENST00000474828 ACER1Q8TDN7 264 aa20.1■□□□□ 0.81
SCAF11-206ENST00000474828 MKL1Q969V6 931 aa20.1■□□□□ 0.81
SCAF11-206ENST00000474828 BEGAINQ9BUH8 593 aa20.1■□□□□ 0.81
SCAF11-206ENST00000474828 EMILIN3Q9NT22 766 aa20.1■□□□□ 0.81
SCAF11-206ENST00000474828 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.1■□□□□ 0.81
SCAF11-206ENST00000474828 NYAP2Q9P242 653 aa20.1■□□□□ 0.81
SCAF11-206ENST00000474828 AGTPBP1Q9UPW5 1226 aa20.1■□□□□ 0.81
SCAF11-206ENST00000474828 ADGRA2Q96PE1 1338 aa20.09■□□□□ 0.81
SCAF11-206ENST00000474828 PRDM1O75626 825 aa20.09■□□□□ 0.81
SCAF11-206ENST00000474828 TRPA1O75762 1119 aa20.09■□□□□ 0.81
SCAF11-206ENST00000474828 HSPA8P11142 646 aaKnown RBP20.09■□□□□ 0.81
SCAF11-206ENST00000474828 USP14P54578 494 aa20.09■□□□□ 0.81
SCAF11-206ENST00000474828 MTMR2Q13614 643 aa20.09■□□□□ 0.81
SCAF11-206ENST00000474828 IMMTQ16891 758 aaKnown RBP20.09■□□□□ 0.81
SCAF11-206ENST00000474828 RNF41Q9H4P4 317 aaPredicted RBP20.09■□□□□ 0.81
SCAF11-206ENST00000474828 INCENPQ9NQS7 918 aa20.09■□□□□ 0.81
SCAF11-206ENST00000474828 TCP11L1Q9NUJ3 509 aa20.09■□□□□ 0.81
SCAF11-206ENST00000474828 MTMR4Q9NYA4 1195 aa20.09■□□□□ 0.81
SCAF11-206ENST00000474828 MPHOSPH10O00566 681 aaKnown RBP20.08■□□□□ 0.81
SCAF11-206ENST00000474828 CYP21A2P08686 494 aa20.08■□□□□ 0.81
SCAF11-206ENST00000474828 HMGCS2P54868 508 aa20.08■□□□□ 0.81
SCAF11-206ENST00000474828 ICA1Q05084 483 aa20.08■□□□□ 0.81
SCAF11-206ENST00000474828 USP17L2Q6R6M4 530 aa20.08■□□□□ 0.81
SCAF11-206ENST00000474828 PDHXO00330 501 aa20.07■□□□□ 0.8
SCAF11-206ENST00000474828 EPB41L2O43491 1005 aaKnown RBP20.07■□□□□ 0.8
SCAF11-206ENST00000474828 EEF2P13639 858 aaKnown RBP20.07■□□□□ 0.8
SCAF11-206ENST00000474828 HAND2P61296 217 aa20.07■□□□□ 0.8
SCAF11-206ENST00000474828 TFAP4Q01664 338 aa20.07■□□□□ 0.8
SCAF11-206ENST00000474828 NECTIN1Q15223 517 aa20.07■□□□□ 0.8
SCAF11-206ENST00000474828 TREML2Q5T2D2 321 aa20.07■□□□□ 0.8
SCAF11-206ENST00000474828 CASC1Q6TDU7 716 aa20.07■□□□□ 0.8
SCAF11-206ENST00000474828 MFSD6Q6ZSS7 791 aa20.07■□□□□ 0.8
SCAF11-206ENST00000474828 R3HDMLQ9H3Y0 253 aa20.07■□□□□ 0.8
SCAF11-206ENST00000474828 IL17RBQ9NRM6 502 aa20.07■□□□□ 0.8
SCAF11-206ENST00000474828 CRHR2Q13324 411 aa20.06■□□□□ 0.8
SCAF11-206ENST00000474828 NKX2-3Q8TAU0 364 aa20.06■□□□□ 0.8
SCAF11-206ENST00000474828 LPAR1Q92633 364 aa20.06■□□□□ 0.8
SCAF11-206ENST00000474828 CEP95Q96GE4 821 aa20.06■□□□□ 0.8
SCAF11-206ENST00000474828 SH2D4AQ9H788 454 aa20.06■□□□□ 0.8
SCAF11-206ENST00000474828 RBM8AQ9Y5S9 174 aaKnown RBP20.06■□□□□ 0.8
SCAF11-206ENST00000474828 NEDD4P46934 1319 aa20.05■□□□□ 0.8
SCAF11-206ENST00000474828 TLR2O60603 784 aa20.05■□□□□ 0.8
SCAF11-206ENST00000474828 TSPY3P0CV98 308 aa20.05■□□□□ 0.8
SCAF11-206ENST00000474828 TSPY8P0CW00 308 aa20.05■□□□□ 0.8
SCAF11-206ENST00000474828 DGKZQ13574 1117 aa20.05■□□□□ 0.8
SCAF11-206ENST00000474828 FAM47AQ5JRC9 791 aa20.05■□□□□ 0.8
SCAF11-206ENST00000474828 PPP4R3BQ5MIZ7 849 aa20.05■□□□□ 0.8
SCAF11-206ENST00000474828 KIAA1211Q6ZU35 1233 aa20.05■□□□□ 0.8
SCAF11-206ENST00000474828 CLEC10AQ8IUN9 316 aa20.05■□□□□ 0.8
SCAF11-206ENST00000474828 STK11IPQ8N1F8 1099 aa20.05■□□□□ 0.8
SCAF11-206ENST00000474828 VCPKMTQ9H867 229 aa20.05■□□□□ 0.8
SCAF11-206ENST00000474828 ARHGEF10LQ9HCE6 1279 aa20.05■□□□□ 0.8
SCAF11-206ENST00000474828 PABPC4Q13310 644 aaKnown RBP eCLIP20.04■□□□□ 0.8
SCAF11-206ENST00000474828 KIAA1755Q5JYT7 1200 aa20.04■□□□□ 0.8
SCAF11-206ENST00000474828 C17orf99Q6UX52 265 aa20.04■□□□□ 0.8
SCAF11-206ENST00000474828 GADL1Q6ZQY3 521 aa20.04■□□□□ 0.8
SCAF11-206ENST00000474828 CNNM2Q9H8M5 875 aa20.04■□□□□ 0.8
SCAF11-206ENST00000474828 ZFYVE28Q9HCC9 887 aa20.04■□□□□ 0.8
SCAF11-206ENST00000474828 TMOD4Q9NZQ9 345 aa20.04■□□□□ 0.8
SCAF11-206ENST00000474828 GPR25O00155 361 aa20.03■□□□□ 0.8
SCAF11-206ENST00000474828 TBC1D8O95759 1140 aa20.03■□□□□ 0.8
SCAF11-206ENST00000474828 TTLL1O95922 423 aa20.03■□□□□ 0.8
SCAF11-206ENST00000474828 VCAM1P19320 739 aa20.03■□□□□ 0.8
SCAF11-206ENST00000474828 TAF1CQ15572 869 aaPredicted RBP20.03■□□□□ 0.8
SCAF11-206ENST00000474828 TSGA10IPQ3SY00 556 aa20.03■□□□□ 0.8
SCAF11-206ENST00000474828 ANKS1AQ92625 1134 aa20.03■□□□□ 0.8
SCAF11-206ENST00000474828 ESR2Q92731 530 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms