RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 TSPY3P0CV98 308 aa18.65■□□□□ 0.58
COL1A1-204ENST00000474644 TSPY8P0CW00 308 aa18.65■□□□□ 0.58
COL1A1-204ENST00000474644 MTMR2Q13614 643 aa18.65■□□□□ 0.58
COL1A1-204ENST00000474644 MOGSQ13724 837 aa18.65■□□□□ 0.58
COL1A1-204ENST00000474644 RRP12Q5JTH9 1297 aaKnown RBP18.65■□□□□ 0.58
COL1A1-204ENST00000474644 PRRT2Q7Z6L0 340 aaPredicted RBP18.65■□□□□ 0.58
COL1A1-204ENST00000474644 REM2Q8IYK8 340 aaPredicted RBP18.65■□□□□ 0.58
COL1A1-204ENST00000474644 TAF6LQ9Y6J9 622 aa18.65■□□□□ 0.58
COL1A1-204ENST00000474644 IGKV6D-41A0A0C4DH26 115 aa18.64■□□□□ 0.57
COL1A1-204ENST00000474644 RANBP6O60518 1105 aaKnown RBP18.64■□□□□ 0.57
COL1A1-204ENST00000474644 REC8O95072 547 aa18.64■□□□□ 0.57
COL1A1-204ENST00000474644 TM4SF4P48230 202 aa18.64■□□□□ 0.57
COL1A1-204ENST00000474644 TFAP4Q01664 338 aa18.64■□□□□ 0.57
COL1A1-204ENST00000474644 NEDD1Q8NHV4 660 aa18.64■□□□□ 0.57
COL1A1-204ENST00000474644 NKX2-3Q8TAU0 364 aa18.64■□□□□ 0.57
COL1A1-204ENST00000474644 ACER1Q8TDN7 264 aa18.64■□□□□ 0.57
COL1A1-204ENST00000474644 LOC285556D6RIA3 1793 aa18.63■□□□□ 0.57
COL1A1-204ENST00000474644 TSPY2A6NKD2 308 aa18.63■□□□□ 0.57
COL1A1-204ENST00000474644 USP17L10C9JJH3 530 aa18.63■□□□□ 0.57
COL1A1-204ENST00000474644 IGF2BP3O00425 579 aaKnown RBP eCLIP18.63■□□□□ 0.57
COL1A1-204ENST00000474644 SLC27A2O14975 620 aa18.63■□□□□ 0.57
COL1A1-204ENST00000474644 HMGCS2P54868 508 aa18.63■□□□□ 0.57
COL1A1-204ENST00000474644 BACE1P56817 501 aa18.63■□□□□ 0.57
COL1A1-204ENST00000474644 INHBEP58166 350 aa18.63■□□□□ 0.57
COL1A1-204ENST00000474644 MAP2K1Q02750 393 aaPredicted RBP18.63■□□□□ 0.57
COL1A1-204ENST00000474644 DGKZQ13574 1117 aa18.63■□□□□ 0.57
COL1A1-204ENST00000474644 NECTIN1Q15223 517 aa18.63■□□□□ 0.57
COL1A1-204ENST00000474644 SH3D19Q5HYK7 790 aa18.63■□□□□ 0.57
COL1A1-204ENST00000474644 CREB3L3Q68CJ9 461 aa18.63■□□□□ 0.57
COL1A1-204ENST00000474644 SIAH1Q8IUQ4 282 aa18.63■□□□□ 0.57
COL1A1-204ENST00000474644 TNS4Q8IZW8 715 aa18.63■□□□□ 0.57
COL1A1-204ENST00000474644 FEZ1Q99689 392 aa18.63■□□□□ 0.57
COL1A1-204ENST00000474644 PTPN18Q99952 460 aa18.63■□□□□ 0.57
COL1A1-204ENST00000474644 KANSL2Q9H9L4 492 aa18.63■□□□□ 0.57
COL1A1-204ENST00000474644 PTPRFP10586 1907 aa18.62■□□□□ 0.57
COL1A1-204ENST00000474644 A0A1W2PRG0 241 aa18.62■□□□□ 0.57
COL1A1-204ENST00000474644 STOX1Q6ZVD7 989 aa18.62■□□□□ 0.57
COL1A1-204ENST00000474644 IFNL1Q8IU54 200 aa18.62■□□□□ 0.57
COL1A1-204ENST00000474644 ESR2Q92731 530 aa18.62■□□□□ 0.57
COL1A1-204ENST00000474644 CEP95Q96GE4 821 aa18.62■□□□□ 0.57
COL1A1-204ENST00000474644 KIAA1683Q9H0B3 1180 aa18.62■□□□□ 0.57
COL1A1-204ENST00000474644 CNNM2Q9H8M5 875 aa18.62■□□□□ 0.57
COL1A1-204ENST00000474644 ARHGEF10LQ9HCE6 1279 aa18.62■□□□□ 0.57
COL1A1-204ENST00000474644 BTBD19C9JJ37 291 aa18.61■□□□□ 0.57
COL1A1-204ENST00000474644 E7EWF7 191 aa18.61■□□□□ 0.57
COL1A1-204ENST00000474644 KDM4AO75164 1064 aa18.61■□□□□ 0.57
COL1A1-204ENST00000474644 EEF2P13639 858 aaKnown RBP18.61■□□□□ 0.57
COL1A1-204ENST00000474644 NT5C2P49902 561 aa18.61■□□□□ 0.57
COL1A1-204ENST00000474644 ZYXQ15942 572 aaKnown RBP18.61■□□□□ 0.57
COL1A1-204ENST00000474644 GADL1Q6ZQY3 521 aa18.61■□□□□ 0.57
COL1A1-204ENST00000474644 FASTKD5Q7L8L6 764 aaKnown RBP18.61■□□□□ 0.57
COL1A1-204ENST00000474644 FAM43AQ8N2R8 423 aa18.61■□□□□ 0.57
COL1A1-204ENST00000474644 KRT23Q9C075 422 aa18.61■□□□□ 0.57
COL1A1-204ENST00000474644 WBP1LQ9NX94 342 aa18.61■□□□□ 0.57
COL1A1-204ENST00000474644 MTMR4Q9NYA4 1195 aa18.61■□□□□ 0.57
COL1A1-204ENST00000474644 B4E1Z4 1266 aa18.6■□□□□ 0.57
COL1A1-204ENST00000474644 C19orf81C9J6K1 198 aa18.6■□□□□ 0.57
COL1A1-204ENST00000474644 NMT2O60551 498 aa18.6■□□□□ 0.57
COL1A1-204ENST00000474644 CAPN15O75808 1086 aa18.6■□□□□ 0.57
COL1A1-204ENST00000474644 ATP2B2Q01814 1243 aa18.6■□□□□ 0.57
COL1A1-204ENST00000474644 GPAT2Q6NUI2 795 aa18.6■□□□□ 0.57
COL1A1-204ENST00000474644 ANKRD23Q86SG2 305 aa18.6■□□□□ 0.57
COL1A1-204ENST00000474644 PROCA1Q8NCQ7 364 aaPredicted RBP18.6■□□□□ 0.57
COL1A1-204ENST00000474644 SH2D4AQ9H788 454 aa18.6■□□□□ 0.57
COL1A1-204ENST00000474644 IL17RBQ9NRM6 502 aa18.6■□□□□ 0.57
COL1A1-204ENST00000474644 EMILIN3Q9NT22 766 aa18.6■□□□□ 0.57
COL1A1-204ENST00000474644 NYAP2Q9P242 653 aa18.6■□□□□ 0.57
COL1A1-204ENST00000474644 TMX2Q9Y320 296 aa18.6■□□□□ 0.57
COL1A1-204ENST00000474644 EPB41L2O43491 1005 aaKnown RBP18.59■□□□□ 0.57
COL1A1-204ENST00000474644 USP14P54578 494 aa18.59■□□□□ 0.57
COL1A1-204ENST00000474644 C8orf34Q49A92 452 aa18.59■□□□□ 0.57
COL1A1-204ENST00000474644 TREML2Q5T2D2 321 aa18.59■□□□□ 0.57
COL1A1-204ENST00000474644 RNF20Q5VTR2 975 aa18.59■□□□□ 0.57
COL1A1-204ENST00000474644 USP17L2Q6R6M4 530 aa18.59■□□□□ 0.57
COL1A1-204ENST00000474644 C12orf42Q96LP6 360 aa18.59■□□□□ 0.57
COL1A1-204ENST00000474644 TCP11L1Q9NUJ3 509 aa18.59■□□□□ 0.57
COL1A1-204ENST00000474644 RNF186Q9NXI6 227 aa18.59■□□□□ 0.57
COL1A1-204ENST00000474644 TMOD4Q9NZQ9 345 aa18.59■□□□□ 0.57
COL1A1-204ENST00000474644 AGTPBP1Q9UPW5 1226 aa18.59■□□□□ 0.57
COL1A1-204ENST00000474644 TTLL1O95922 423 aa18.58■□□□□ 0.56
COL1A1-204ENST00000474644 HSPA4P34932 840 aa18.58■□□□□ 0.56
COL1A1-204ENST00000474644 TRDNQ13061 729 aa18.58■□□□□ 0.56
COL1A1-204ENST00000474644 OTUD7BQ6GQQ9 843 aa18.58■□□□□ 0.56
COL1A1-204ENST00000474644 RALYLQ86SE5 291 aaKnown RBP18.58■□□□□ 0.56
COL1A1-204ENST00000474644 CLIP2Q9UDT6 1046 aa18.58■□□□□ 0.56
COL1A1-204ENST00000474644 STX8Q9UNK0 236 aa18.58■□□□□ 0.56
COL1A1-204ENST00000474644 PDHXO00330 501 aa18.57■□□□□ 0.56
COL1A1-204ENST00000474644 FOXN1O15353 648 aa18.57■□□□□ 0.56
COL1A1-204ENST00000474644 ALDH1A1P00352 501 aa18.57■□□□□ 0.56
COL1A1-204ENST00000474644 VCAM1P19320 739 aa18.57■□□□□ 0.56
COL1A1-204ENST00000474644 NOVP48745 357 aa18.57■□□□□ 0.56
COL1A1-204ENST00000474644 PPP4R3BQ5MIZ7 849 aa18.57■□□□□ 0.56
COL1A1-204ENST00000474644 RASEFQ8IZ41 740 aa18.57■□□□□ 0.56
COL1A1-204ENST00000474644 LRRC47Q8N1G4 583 aaKnown RBP18.57■□□□□ 0.56
COL1A1-204ENST00000474644 NCOA7Q8NI08 942 aa18.57■□□□□ 0.56
COL1A1-204ENST00000474644 ZKSCAN3Q9BRR0 538 aa18.57■□□□□ 0.56
COL1A1-204ENST00000474644 BEGAINQ9BUH8 593 aa18.57■□□□□ 0.56
COL1A1-204ENST00000474644 USP26Q9BXU7 913 aa18.57■□□□□ 0.56
COL1A1-204ENST00000474644 VCPKMTQ9H867 229 aa18.57■□□□□ 0.56
COL1A1-204ENST00000474644 ZCCHC17Q9NP64 241 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms