RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 PLEKHG2Q9H7P9 1386 aa9.42□□□□□ -0.9
VPS50-211ENST00000474412 IL13P35225 146 aa9.42□□□□□ -0.9
VPS50-211ENST00000474412 FMR1NBQ8N0W7 255 aaPredicted RBP9.42□□□□□ -0.9
VPS50-211ENST00000474412 DTWD1Q8N5C7 304 aa9.42□□□□□ -0.9
VPS50-211ENST00000474412 PIGBQ92521 554 aa9.42□□□□□ -0.9
VPS50-211ENST00000474412 RASSF4Q9H2L5 321 aa9.42□□□□□ -0.9
VPS50-211ENST00000474412 PPP1R1BQ9UD71 204 aaPredicted RBP9.42□□□□□ -0.9
VPS50-211ENST00000474412 NPC1L1Q9UHC9 1359 aa9.41□□□□□ -0.9
VPS50-211ENST00000474412 TNFRSF21O75509 655 aa9.41□□□□□ -0.9
VPS50-211ENST00000474412 PROCP04070 461 aa9.41□□□□□ -0.9
VPS50-211ENST00000474412 MTHFSP49914 203 aa9.41□□□□□ -0.9
VPS50-211ENST00000474412 ARHGAP4P98171 946 aa9.41□□□□□ -0.9
VPS50-211ENST00000474412 LACRTQ9GZZ8 138 aa9.41□□□□□ -0.9
VPS50-211ENST00000474412 MTFR1LQ9H019 292 aa9.41□□□□□ -0.9
VPS50-211ENST00000474412 FOXD3Q9UJU5 478 aaPredicted RBP9.41□□□□□ -0.9
VPS50-211ENST00000474412 SPG7Q9UQ90 795 aa9.41□□□□□ -0.9
VPS50-211ENST00000474412 DLEC1Q9Y238 1755 aa9.41□□□□□ -0.9
VPS50-211ENST00000474412 FAM177BA6PVY3 158 aa9.4□□□□□ -0.9
VPS50-211ENST00000474412 HMOX1P09601 288 aa9.4□□□□□ -0.9
VPS50-211ENST00000474412 ITPK1Q13572 414 aa9.4□□□□□ -0.9
VPS50-211ENST00000474412 SULT6B1Q6IMI4 303 aa9.4□□□□□ -0.9
VPS50-211ENST00000474412 ZNF530Q6P9A1 599 aaPredicted RBP9.4□□□□□ -0.9
VPS50-211ENST00000474412 IFNL2Q8IZJ0 200 aa9.4□□□□□ -0.9
VPS50-211ENST00000474412 CACTIN-AS1Q8N1I8 211 aa9.4□□□□□ -0.9
VPS50-211ENST00000474412 CEP120Q8N960 986 aa9.4□□□□□ -0.9
VPS50-211ENST00000474412 LINC00116Q8NCU8 138 aa9.4□□□□□ -0.9
VPS50-211ENST00000474412 CHRDQ9H2X0 955 aa9.4□□□□□ -0.9
VPS50-211ENST00000474412 ASAP1Q9ULH1 1129 aa9.4□□□□□ -0.9
VPS50-211ENST00000474412 ANKRD31Q8N7Z5 1873 aa9.39□□□□□ -0.91
VPS50-211ENST00000474412 EREGO14944 169 aa9.39□□□□□ -0.91
VPS50-211ENST00000474412 ECM1Q16610 540 aa9.39□□□□□ -0.91
VPS50-211ENST00000474412 COL23A1Q86Y22 540 aaPredicted RBP9.39□□□□□ -0.91
VPS50-211ENST00000474412 PBX4Q9BYU1 374 aa9.39□□□□□ -0.91
VPS50-211ENST00000474412 TMOD3Q9NYL9 352 aa9.39□□□□□ -0.91
VPS50-211ENST00000474412 SALL4Q9UJQ4 1053 aa9.39□□□□□ -0.91
VPS50-211ENST00000474412 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.39□□□□□ -0.91
VPS50-211ENST00000474412 ARFGEF1Q9Y6D6 1849 aa9.39□□□□□ -0.91
VPS50-211ENST00000474412 COL11A2P13942 1736 aaPredicted RBP9.39□□□□□ -0.91
VPS50-211ENST00000474412 SOWAHDA6NJG2 315 aa9.38□□□□□ -0.91
VPS50-211ENST00000474412 C9orf172C9J069 976 aa9.38□□□□□ -0.91
VPS50-211ENST00000474412 ACPPP15309 386 aa9.38□□□□□ -0.91
VPS50-211ENST00000474412 GATA4P43694 442 aa9.38□□□□□ -0.91
VPS50-211ENST00000474412 FBXO11Q86XK2 927 aa9.38□□□□□ -0.91
VPS50-211ENST00000474412 TFCP2L1Q9NZI6 479 aa9.38□□□□□ -0.91
VPS50-211ENST00000474412 BIN2Q9UBW5 565 aaPredicted RBP9.38□□□□□ -0.91
VPS50-211ENST00000474412 GNEQ9Y223 722 aaKnown RBP9.38□□□□□ -0.91
VPS50-211ENST00000474412 NRXN2Q9P2S2 1712 aa9.38□□□□□ -0.91
VPS50-211ENST00000474412 CCDC88AQ3V6T2 1871 aa9.37□□□□□ -0.91
VPS50-211ENST00000474412 SELPP16109 830 aa9.37□□□□□ -0.91
VPS50-211ENST00000474412 CDC27P30260 824 aa9.37□□□□□ -0.91
VPS50-211ENST00000474412 SHISA2Q6UWI4 295 aa9.37□□□□□ -0.91
VPS50-211ENST00000474412 MUC3BQ9H195 1237 aa9.37□□□□□ -0.91
VPS50-211ENST00000474412 ATG3Q9NT62 314 aa9.37□□□□□ -0.91
VPS50-211ENST00000474412 MAP3K5Q99683 1374 aa9.37□□□□□ -0.91
VPS50-211ENST00000474412 EDN3P14138 238 aa9.36□□□□□ -0.91
VPS50-211ENST00000474412 PTPRAP18433 802 aa9.36□□□□□ -0.91
VPS50-211ENST00000474412 NLGN2Q8NFZ4 835 aa9.36□□□□□ -0.91
VPS50-211ENST00000474412 PPME1Q9Y570 386 aa9.36□□□□□ -0.91
VPS50-211ENST00000474412 DIAPH1O60610 1272 aaKnown RBP9.35□□□□□ -0.91
VPS50-211ENST00000474412 CDC25BP30305 580 aa9.35□□□□□ -0.91
VPS50-211ENST00000474412 NRG1Q02297 640 aaPredicted RBP9.35□□□□□ -0.91
VPS50-211ENST00000474412 PLEKHO1Q53GL0 409 aaPredicted RBP9.35□□□□□ -0.91
VPS50-211ENST00000474412 MAP4K3Q8IVH8 894 aa9.35□□□□□ -0.91
VPS50-211ENST00000474412 LENG1Q96BZ8 264 aaPredicted RBP9.35□□□□□ -0.91
VPS50-211ENST00000474412 POP1Q99575 1024 aaKnown RBP9.35□□□□□ -0.91
VPS50-211ENST00000474412 SYT17Q9BSW7 474 aa9.35□□□□□ -0.91
VPS50-211ENST00000474412 ZFYVE28Q9HCC9 887 aa9.35□□□□□ -0.91
VPS50-211ENST00000474412 SRA1Q9HD15 236 aaKnown RBP9.35□□□□□ -0.91
VPS50-211ENST00000474412 DZANK1Q9NVP4 752 aa9.35□□□□□ -0.91
VPS50-211ENST00000474412 LINC01387J3KSC0 135 aa9.34□□□□□ -0.91
VPS50-211ENST00000474412 DEAF1O75398 565 aaPredicted RBP9.34□□□□□ -0.91
VPS50-211ENST00000474412 TRPA1O75762 1119 aa9.34□□□□□ -0.91
VPS50-211ENST00000474412 NEFLP07196 543 aa9.34□□□□□ -0.91
VPS50-211ENST00000474412 KCNA1Q09470 495 aa9.34□□□□□ -0.91
VPS50-211ENST00000474412 MTHFSDQ2M296 383 aaKnown RBP9.34□□□□□ -0.91
VPS50-211ENST00000474412 FAM117BQ6P1L5 589 aa9.34□□□□□ -0.91
VPS50-211ENST00000474412 TXNDC11Q6PKC3 985 aa9.34□□□□□ -0.91
VPS50-211ENST00000474412 SMARCC1Q92922 1105 aaPredicted RBP9.34□□□□□ -0.91
VPS50-211ENST00000474412 CITED4Q96RK1 184 aa9.34□□□□□ -0.91
VPS50-211ENST00000474412 OSMRQ99650 979 aa9.34□□□□□ -0.91
VPS50-211ENST00000474412 ARFGEF2Q9Y6D5 1785 aa9.34□□□□□ -0.91
VPS50-211ENST00000474412 PDE2AO00408 941 aaPredicted RBP9.33□□□□□ -0.92
VPS50-211ENST00000474412 U2SURPO15042 1029 aaKnown RBP9.33□□□□□ -0.92
VPS50-211ENST00000474412 PPP2R1AP30153 589 aa9.33□□□□□ -0.92
VPS50-211ENST00000474412 CABP4P57796 275 aa9.33□□□□□ -0.92
VPS50-211ENST00000474412 MBTPS1Q14703 1052 aa9.33□□□□□ -0.92
VPS50-211ENST00000474412 AMOTQ4VCS5 1084 aa9.33□□□□□ -0.92
VPS50-211ENST00000474412 C1orf141Q5JVX7 400 aa9.33□□□□□ -0.92
VPS50-211ENST00000474412 FAM129BQ96TA1 746 aa9.33□□□□□ -0.92
VPS50-211ENST00000474412 ZKSCAN3Q9BRR0 538 aa9.33□□□□□ -0.92
VPS50-211ENST00000474412 TRAIPQ9BWF2 469 aa9.33□□□□□ -0.92
VPS50-211ENST00000474412 LGR6Q9HBX8 967 aa9.33□□□□□ -0.92
VPS50-211ENST00000474412 IVNS1ABPQ9Y6Y0 642 aa9.33□□□□□ -0.92
VPS50-211ENST00000474412 SBF1O95248 1867 aa9.33□□□□□ -0.92
VPS50-211ENST00000474412 TIAM2Q8IVF5 1701 aa9.33□□□□□ -0.92
VPS50-211ENST00000474412 NUP98P52948 1817 aa9.33□□□□□ -0.92
VPS50-211ENST00000474412 ANKRD36CQ5JPF3 1778 aa9.32□□□□□ -0.92
VPS50-211ENST00000474412 ERVV-2B6SEH9 535 aa9.32□□□□□ -0.92
VPS50-211ENST00000474412 POLR3DP05423 398 aaPredicted RBP9.32□□□□□ -0.92
VPS50-211ENST00000474412 HSP90AB1P08238 724 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms