RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 SHMT1P34896 483 aa14.45□□□□□ -0.1
SMPD4-217ENST00000473720 Q3C1V9 767 aa14.45□□□□□ -0.1
SMPD4-217ENST00000473720 ACER1Q8TDN7 264 aa14.45□□□□□ -0.1
SMPD4-217ENST00000473720 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.45□□□□□ -0.1
SMPD4-217ENST00000473720 HTATIP2Q9BUP3 242 aa14.45□□□□□ -0.1
SMPD4-217ENST00000473720 MORF4L1Q9UBU8 362 aa14.45□□□□□ -0.1
SMPD4-217ENST00000473720 COLQQ9Y215 455 aaPredicted RBP14.45□□□□□ -0.1
SMPD4-217ENST00000473720 CEP290O15078 2479 aa14.44□□□□□ -0.1
SMPD4-217ENST00000473720 PLXNA1Q9UIW2 1896 aa14.44□□□□□ -0.1
SMPD4-217ENST00000473720 TCRBV5S4A2TA0A5A2 114 aa14.44□□□□□ -0.1
SMPD4-217ENST00000473720 PRKAB2O43741 272 aa14.44□□□□□ -0.1
SMPD4-217ENST00000473720 MBD4O95243 580 aa14.44□□□□□ -0.1
SMPD4-217ENST00000473720 HMGCRP04035 888 aa14.44□□□□□ -0.1
SMPD4-217ENST00000473720 CHGBP05060 677 aa14.44□□□□□ -0.1
SMPD4-217ENST00000473720 ERVK-9P63128 1117 aa14.44□□□□□ -0.1
SMPD4-217ENST00000473720 ERVK-24P63145 666 aa14.44□□□□□ -0.1
SMPD4-217ENST00000473720 PDE3AQ14432 1141 aa14.44□□□□□ -0.1
SMPD4-217ENST00000473720 SEPT2Q15019 361 aa14.44□□□□□ -0.1
SMPD4-217ENST00000473720 TMED8Q6PL24 325 aaPredicted RBP14.44□□□□□ -0.1
SMPD4-217ENST00000473720 SLC44A5Q8NCS7 719 aa14.44□□□□□ -0.1
SMPD4-217ENST00000473720 NUDT12Q9BQG2 462 aa14.44□□□□□ -0.1
SMPD4-217ENST00000473720 LRRCC1Q9C099 1032 aa14.44□□□□□ -0.1
SMPD4-217ENST00000473720 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.44□□□□□ -0.11e-6■■■■■ 32
SMPD4-217ENST00000473720 PORCNQ9H237 461 aa14.44□□□□□ -0.1
SMPD4-217ENST00000473720 DCP1AQ9NPI6 582 aaPredicted RBP14.44□□□□□ -0.1
SMPD4-217ENST00000473720 RBPJLQ9UBG7 517 aa14.44□□□□□ -0.1
SMPD4-217ENST00000473720 GJD2Q9UKL4 321 aa14.44□□□□□ -0.1
SMPD4-217ENST00000473720 USP17L15C9J2P7 530 aa14.43□□□□□ -0.1
SMPD4-217ENST00000473720 USP17L13C9JLJ4 530 aa14.43□□□□□ -0.1
SMPD4-217ENST00000473720 USP17L11C9JVI0 530 aa14.43□□□□□ -0.1
SMPD4-217ENST00000473720 USP17L18D6R9N7 530 aa14.43□□□□□ -0.1
SMPD4-217ENST00000473720 USP17L22D6RA61 530 aa14.43□□□□□ -0.1
SMPD4-217ENST00000473720 USP17L17D6RBQ6 530 aa14.43□□□□□ -0.1
SMPD4-217ENST00000473720 USP17L19D6RCP7 530 aa14.43□□□□□ -0.1
SMPD4-217ENST00000473720 USP17L20D6RJB6 530 aa14.43□□□□□ -0.1
SMPD4-217ENST00000473720 ATP5JP18859 108 aa14.43□□□□□ -0.1
SMPD4-217ENST00000473720 ADD2P35612 726 aa14.43□□□□□ -0.1
SMPD4-217ENST00000473720 USP17L24Q0WX57 530 aa14.43□□□□□ -0.1
SMPD4-217ENST00000473720 TRIB2Q92519 343 aa14.43□□□□□ -0.1
SMPD4-217ENST00000473720 DYNLL2Q96FJ2 89 aa14.43□□□□□ -0.1
SMPD4-217ENST00000473720 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.43□□□□□ -0.13e-6■■■□□ 15.6
SMPD4-217ENST00000473720 HMX1Q9NP08 348 aaPredicted RBP14.43□□□□□ -0.1
SMPD4-217ENST00000473720 VCAM1P19320 739 aa14.42□□□□□ -0.1
SMPD4-217ENST00000473720 MAPK4P31152 587 aa14.42□□□□□ -0.1
SMPD4-217ENST00000473720 GUCY1A2P33402 732 aa14.42□□□□□ -0.1
SMPD4-217ENST00000473720 USP14P54578 494 aa14.42□□□□□ -0.1
SMPD4-217ENST00000473720 SAMD1Q6SPF0 538 aaPredicted RBP14.42□□□□□ -0.1
SMPD4-217ENST00000473720 CHRDL2Q6WN34 429 aa14.42□□□□□ -0.1
SMPD4-217ENST00000473720 GPR142Q7Z601 462 aa14.42□□□□□ -0.1
SMPD4-217ENST00000473720 HAUS7Q99871 368 aa14.42□□□□□ -0.1
SMPD4-217ENST00000473720 RPAP3Q9H6T3 665 aaPredicted RBP14.42□□□□□ -0.1
SMPD4-217ENST00000473720 PAK6Q9NQU5 681 aaPredicted RBP14.42□□□□□ -0.1
SMPD4-217ENST00000473720 RPTORQ8N122 1335 aa14.41□□□□□ -0.1
SMPD4-217ENST00000473720 CYP2D7A0A087X1C5 515 aa14.41□□□□□ -0.1
SMPD4-217ENST00000473720 GABPAQ06546 454 aa14.41□□□□□ -0.1
SMPD4-217ENST00000473720 POTEEQ6S8J3 1075 aa14.41□□□□□ -0.1
SMPD4-217ENST00000473720 CATSPERGQ6ZRH7 1159 aa14.41□□□□□ -0.1
SMPD4-217ENST00000473720 PLEKHH3Q7Z736 793 aa14.41□□□□□ -0.1
SMPD4-217ENST00000473720 UBE2Q1Q7Z7E8 422 aa14.41□□□□□ -0.1
SMPD4-217ENST00000473720 CLEC10AQ8IUN9 316 aa14.41□□□□□ -0.1
SMPD4-217ENST00000473720 DIS3LQ8TF46 1054 aaKnown RBP14.41□□□□□ -0.1
SMPD4-217ENST00000473720 GTF3C2Q8WUA4 911 aaPredicted RBP14.41□□□□□ -0.1
SMPD4-217ENST00000473720 PAWRQ96IZ0 340 aaKnown RBP14.41□□□□□ -0.1
SMPD4-217ENST00000473720 C12orf42Q96LP6 360 aa14.41□□□□□ -0.1
SMPD4-217ENST00000473720 KIAA1683Q9H0B3 1180 aa14.41□□□□□ -0.1
SMPD4-217ENST00000473720 SMCHD1A6NHR9 2005 aa14.41□□□□□ -0.1
SMPD4-217ENST00000473720 A0A0G2JMZ2 1700 aa14.41□□□□□ -0.1
SMPD4-217ENST00000473720 SMIM22K7EJ46 135 aa14.4□□□□□ -0.1
SMPD4-217ENST00000473720 EVI5O60447 810 aa14.4□□□□□ -0.1
SMPD4-217ENST00000473720 CNMDO75829 334 aa14.4□□□□□ -0.1
SMPD4-217ENST00000473720 PRKAR2AP13861 404 aaKnown RBP14.4□□□□□ -0.1
SMPD4-217ENST00000473720 ZKSCAN1P17029 563 aaPredicted RBP14.4□□□□□ -0.1
SMPD4-217ENST00000473720 CCL14Q16627 93 aa14.4□□□□□ -0.1
SMPD4-217ENST00000473720 TSHZ3Q63HK5 1081 aa14.4□□□□□ -0.1
SMPD4-217ENST00000473720 AMOTL1Q8IY63 956 aa14.4□□□□□ -0.1
SMPD4-217ENST00000473720 STK11IPQ8N1F8 1099 aa14.4□□□□□ -0.1
SMPD4-217ENST00000473720 SOCS4Q8WXH5 440 aa14.4□□□□□ -0.1
SMPD4-217ENST00000473720 DDRGK1Q96HY6 314 aa14.4□□□□□ -0.1
SMPD4-217ENST00000473720 TANGO6Q9C0B7 1094 aa14.4□□□□□ -0.1
SMPD4-217ENST00000473720 RABGAP1Q9Y3P9 1069 aa14.4□□□□□ -0.1
SMPD4-217ENST00000473720 SLC4A4Q9Y6R1 1079 aa14.4□□□□□ -0.1
SMPD4-217ENST00000473720 A0A1W2PRG0 241 aa14.39□□□□□ -0.11
SMPD4-217ENST00000473720 AKR1B1P15121 316 aa14.39□□□□□ -0.11
SMPD4-217ENST00000473720 RGS2P41220 211 aa14.39□□□□□ -0.11
SMPD4-217ENST00000473720 CCNA1P78396 465 aa14.39□□□□□ -0.11
SMPD4-217ENST00000473720 ATP2B2Q01814 1243 aa14.39□□□□□ -0.11
SMPD4-217ENST00000473720 ATP8A2Q9NTI2 1148 aa14.39□□□□□ -0.11
SMPD4-217ENST00000473720 BTBD7Q9P203 1132 aa14.39□□□□□ -0.11
SMPD4-217ENST00000473720 SWAP70Q9UH65 585 aa14.39□□□□□ -0.11
SMPD4-217ENST00000473720 NR2E3Q9Y5X4 410 aa14.39□□□□□ -0.11
SMPD4-217ENST00000473720 SPDYE16A6NNV3 312 aaPredicted RBP14.38□□□□□ -0.11
SMPD4-217ENST00000473720 USP17L12C9JPN9 530 aa14.38□□□□□ -0.11
SMPD4-217ENST00000473720 USP17L21D6R901 530 aa14.38□□□□□ -0.11
SMPD4-217ENST00000473720 RAD21O60216 631 aa14.38□□□□□ -0.11
SMPD4-217ENST00000473720 ZSCAN25Q6NSZ9 544 aa14.38□□□□□ -0.11
SMPD4-217ENST00000473720 TMEM179Q6ZVK1 233 aa14.38□□□□□ -0.11
SMPD4-217ENST00000473720 NECAB2Q7Z6G3 386 aa14.38□□□□□ -0.11
SMPD4-217ENST00000473720 SPICE1Q8N0Z3 855 aa14.38□□□□□ -0.11
SMPD4-217ENST00000473720 CRISPLD2Q9H0B8 497 aa14.38□□□□□ -0.11
SMPD4-217ENST00000473720 PUS7LQ9H0K6 701 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms