RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 CCL5P13501 91 aa21.69■■□□□ 1.06
SNX4-204ENST00000473417 PDE4AP27815 886 aa21.69■■□□□ 1.06
SNX4-204ENST00000473417 UBXN2AP68543 259 aa21.69■■□□□ 1.06
SNX4-204ENST00000473417 CERKLQ49MI3 558 aaPredicted RBP21.69■■□□□ 1.06
SNX4-204ENST00000473417 PXYLP1Q8TE99 480 aa21.69■■□□□ 1.06
SNX4-204ENST00000473417 C12orf42Q96LP6 360 aa21.69■■□□□ 1.06
SNX4-204ENST00000473417 ARMT1Q9H993 441 aa21.69■■□□□ 1.06
SNX4-204ENST00000473417 DCP1AQ9NPI6 582 aaPredicted RBP21.69■■□□□ 1.06
SNX4-204ENST00000473417 EMILIN3Q9NT22 766 aa21.69■■□□□ 1.06
SNX4-204ENST00000473417 MCM9Q9NXL9 1143 aa21.69■■□□□ 1.06
SNX4-204ENST00000473417 RLFQ13129 1914 aa21.68■■□□□ 1.06
SNX4-204ENST00000473417 RNF113AO15541 343 aaKnown RBP21.68■■□□□ 1.06
SNX4-204ENST00000473417 MBD4O95243 580 aa21.68■■□□□ 1.06
SNX4-204ENST00000473417 POLR3DP05423 398 aaPredicted RBP21.68■■□□□ 1.06
SNX4-204ENST00000473417 ELNP15502 786 aa21.68■■□□□ 1.06
SNX4-204ENST00000473417 HERVK_113P62684 666 aa21.68■■□□□ 1.06
SNX4-204ENST00000473417 EVX2Q03828 476 aa21.68■■□□□ 1.06
SNX4-204ENST00000473417 ABCB5Q2M3G0 1257 aa21.68■■□□□ 1.06
SNX4-204ENST00000473417 USP17L2Q6R6M4 530 aa21.68■■□□□ 1.06
SNX4-204ENST00000473417 PUS7LQ9H0K6 701 aaKnown RBP21.68■■□□□ 1.06
SNX4-204ENST00000473417 OSBPL3Q9H4L5 887 aa21.68■■□□□ 1.06
SNX4-204ENST00000473417 BIN2Q9UBW5 565 aaPredicted RBP21.68■■□□□ 1.06
SNX4-204ENST00000473417 A0A0G2JMZ2 1700 aa21.68■■□□□ 1.06
SNX4-204ENST00000473417 GJB1P08034 283 aa21.67■■□□□ 1.06
SNX4-204ENST00000473417 ZFYP08048 801 aaPredicted RBP21.67■■□□□ 1.06
SNX4-204ENST00000473417 EVI5LQ96CN4 794 aa21.67■■□□□ 1.06
SNX4-204ENST00000473417 P2RX7Q99572 595 aaKnown RBP21.67■■□□□ 1.06
SNX4-204ENST00000473417 TRIM6-TRIM34B2RNG4 842 aa21.66■■□□□ 1.06
SNX4-204ENST00000473417 GJA8P48165 433 aa21.66■■□□□ 1.06
SNX4-204ENST00000473417 RAB3GAP1Q15042 981 aa21.66■■□□□ 1.06
SNX4-204ENST00000473417 LRRFIP1Q32MZ4 808 aaKnown RBP21.66■■□□□ 1.06
SNX4-204ENST00000473417 NKX2-3Q8TAU0 364 aa21.66■■□□□ 1.06
SNX4-204ENST00000473417 APPBP2Q92624 585 aa21.66■■□□□ 1.06
SNX4-204ENST00000473417 OSBP2Q969R2 916 aa21.66■■□□□ 1.06
SNX4-204ENST00000473417 FEZ1Q99689 392 aa21.66■■□□□ 1.06
SNX4-204ENST00000473417 KIAA1683Q9H0B3 1180 aa21.66■■□□□ 1.06
SNX4-204ENST00000473417 RNF208Q9H0X6 261 aa21.66■■□□□ 1.06
SNX4-204ENST00000473417 TXNRD2Q9NNW7 524 aa21.66■■□□□ 1.06
SNX4-204ENST00000473417 GREB1LQ9C091 1923 aaPredicted RBP21.66■■□□□ 1.06
SNX4-204ENST00000473417 CEP290O15078 2479 aa21.65■■□□□ 1.06
SNX4-204ENST00000473417 PRKAB2O43741 272 aa21.65■■□□□ 1.06
SNX4-204ENST00000473417 INHAP05111 366 aa21.65■■□□□ 1.06
SNX4-204ENST00000473417 GUCY1A2P33402 732 aa21.65■■□□□ 1.06
SNX4-204ENST00000473417 RILPL2Q969X0 211 aa21.65■■□□□ 1.06
SNX4-204ENST00000473417 CCDC136Q96JN2 1154 aa21.65■■□□□ 1.06
SNX4-204ENST00000473417 UNC93B1Q9H1C4 597 aa21.65■■□□□ 1.06
SNX4-204ENST00000473417 CABP5Q9NP86 173 aa21.65■■□□□ 1.06
SNX4-204ENST00000473417 ATP8A2Q9NTI2 1148 aa21.65■■□□□ 1.06
SNX4-204ENST00000473417 TAOK2Q9UL54 1235 aa21.65■■□□□ 1.06
SNX4-204ENST00000473417 CYP2D6P10635 497 aa21.64■■□□□ 1.05
SNX4-204ENST00000473417 USP14P54578 494 aa21.64■■□□□ 1.05
SNX4-204ENST00000473417 ZYXQ15942 572 aaKnown RBP21.64■■□□□ 1.05
SNX4-204ENST00000473417 CENPQQ7L2Z9 268 aaPredicted RBP21.64■■□□□ 1.05
SNX4-204ENST00000473417 ACER1Q8TDN7 264 aa21.64■■□□□ 1.05
SNX4-204ENST00000473417 GTF3C2Q8WUA4 911 aaPredicted RBP21.64■■□□□ 1.05
SNX4-204ENST00000473417 GJD2Q9UKL4 321 aa21.64■■□□□ 1.05
SNX4-204ENST00000473417 FRMPD3Q5JV73 1810 aa21.64■■□□□ 1.05
SNX4-204ENST00000473417 PEX10O60683 326 aa21.63■■□□□ 1.05
SNX4-204ENST00000473417 POTEEQ6S8J3 1075 aa21.63■■□□□ 1.05
SNX4-204ENST00000473417 GPRC5AQ8NFJ5 357 aa21.63■■□□□ 1.05
SNX4-204ENST00000473417 RBPJLQ9UBG7 517 aa21.63■■□□□ 1.05
SNX4-204ENST00000473417 SLC4A4Q9Y6R1 1079 aa21.63■■□□□ 1.05
SNX4-204ENST00000473417 ALPK3Q96L96 1907 aa21.63■■□□□ 1.05
SNX4-204ENST00000473417 M0R2C6 588 aa21.62■■□□□ 1.05
SNX4-204ENST00000473417 VCAM1P19320 739 aa21.62■■□□□ 1.05
SNX4-204ENST00000473417 ERVK-9P63128 1117 aa21.62■■□□□ 1.05
SNX4-204ENST00000473417 ERVK-24P63145 666 aa21.62■■□□□ 1.05
SNX4-204ENST00000473417 SEPT2Q15019 361 aa21.62■■□□□ 1.05
SNX4-204ENST00000473417 UBE2Q1Q7Z7E8 422 aa21.62■■□□□ 1.05
SNX4-204ENST00000473417 SLC44A5Q8NCS7 719 aa21.62■■□□□ 1.05
SNX4-204ENST00000473417 U2AF1L4Q8WU68 220 aaKnown RBP21.62■■□□□ 1.05
SNX4-204ENST00000473417 STRBPQ96SI9 672 aaKnown RBP21.62■■□□□ 1.05
SNX4-204ENST00000473417 SEC62Q99442 399 aaKnown RBP21.62■■□□□ 1.05
SNX4-204ENST00000473417 PCDH10Q9P2E7 1040 aa21.62■■□□□ 1.05
SNX4-204ENST00000473417 SWAP70Q9UH65 585 aa21.62■■□□□ 1.05
SNX4-204ENST00000473417 COL11A1P12107 1806 aaPredicted RBP21.62■■□□□ 1.05
SNX4-204ENST00000473417 USP17L15C9J2P7 530 aa21.61■■□□□ 1.05
SNX4-204ENST00000473417 USP17L13C9JLJ4 530 aa21.61■■□□□ 1.05
SNX4-204ENST00000473417 USP17L11C9JVI0 530 aa21.61■■□□□ 1.05
SNX4-204ENST00000473417 USP17L18D6R9N7 530 aa21.61■■□□□ 1.05
SNX4-204ENST00000473417 USP17L22D6RA61 530 aa21.61■■□□□ 1.05
SNX4-204ENST00000473417 USP17L17D6RBQ6 530 aa21.61■■□□□ 1.05
SNX4-204ENST00000473417 USP17L19D6RCP7 530 aa21.61■■□□□ 1.05
SNX4-204ENST00000473417 USP17L20D6RJB6 530 aa21.61■■□□□ 1.05
SNX4-204ENST00000473417 USP17L24Q0WX57 530 aa21.61■■□□□ 1.05
SNX4-204ENST00000473417 ZMYM1Q5SVZ6 1142 aa21.61■■□□□ 1.05
SNX4-204ENST00000473417 PAK6Q9NQU5 681 aaPredicted RBP21.61■■□□□ 1.05
SNX4-204ENST00000473417 ZNF236Q9UL36 1845 aa21.61■■□□□ 1.05
SNX4-204ENST00000473417 HMGCRP04035 888 aa21.6■■□□□ 1.05
SNX4-204ENST00000473417 CATSPERGQ6ZRH7 1159 aa21.6■■□□□ 1.05
SNX4-204ENST00000473417 DYNLL2Q96FJ2 89 aa21.6■■□□□ 1.05
SNX4-204ENST00000473417 PAGR1Q9BTK6 254 aa21.6■■□□□ 1.05
SNX4-204ENST00000473417 A0A1W2PRG0 241 aa21.59■■□□□ 1.05
SNX4-204ENST00000473417 MPHOSPH10O00566 681 aaKnown RBP21.59■■□□□ 1.05
SNX4-204ENST00000473417 GPAA1O43292 621 aa21.59■■□□□ 1.05
SNX4-204ENST00000473417 SGPL1O95470 568 aa21.59■■□□□ 1.05
SNX4-204ENST00000473417 MAPK4P31152 587 aa21.59■■□□□ 1.05
SNX4-204ENST00000473417 Q3C1V9 767 aa21.59■■□□□ 1.05
SNX4-204ENST00000473417 C12orf60Q5U649 245 aa21.59■■□□□ 1.05
SNX4-204ENST00000473417 LBX2Q6XYB7 198 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms