RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 NR5A1Q13285 461 aa12.16□□□□□ -0.46
APLF-204ENST00000471727 PNOCQ13519 176 aa12.16□□□□□ -0.46
APLF-204ENST00000471727 SYCP1Q15431 976 aa12.16□□□□□ -0.46
APLF-204ENST00000471727 C12orf60Q5U649 245 aa12.16□□□□□ -0.46
APLF-204ENST00000471727 FILIP1Q7Z7B0 1213 aa12.16□□□□□ -0.46
APLF-204ENST00000471727 SLF2Q8IX21 1173 aa12.16□□□□□ -0.46
APLF-204ENST00000471727 CNBD1Q8NA66 436 aa12.16□□□□□ -0.46
APLF-204ENST00000471727 SMARCE1Q969G3 411 aa12.16□□□□□ -0.46
APLF-204ENST00000471727 XPO4Q9C0E2 1151 aaKnown RBP12.16□□□□□ -0.46
APLF-204ENST00000471727 IFNKQ9P0W0 207 aa12.16□□□□□ -0.46
APLF-204ENST00000471727 PCDHB6Q9Y5E3 794 aa12.16□□□□□ -0.46
APLF-204ENST00000471727 MAST2Q6P0Q8 1798 aa12.16□□□□□ -0.46
APLF-204ENST00000471727 CYP2D7A0A087X1C5 515 aa12.15□□□□□ -0.46
APLF-204ENST00000471727 WTIPA6NIX2 430 aaPredicted RBP12.15□□□□□ -0.46
APLF-204ENST00000471727 UBE2Q2LH0YL09 131 aa12.15□□□□□ -0.46
APLF-204ENST00000471727 SCG2P13521 617 aa12.15□□□□□ -0.46
APLF-204ENST00000471727 TNNT1P13805 278 aa12.15□□□□□ -0.46
APLF-204ENST00000471727 PLCG2P16885 1265 aa12.15□□□□□ -0.46
APLF-204ENST00000471727 KLRK1P26718 216 aa12.15□□□□□ -0.46
APLF-204ENST00000471727 USP5P45974 858 aa12.15□□□□□ -0.46
APLF-204ENST00000471727 GALNT17Q6IS24 598 aa12.15□□□□□ -0.46
APLF-204ENST00000471727 TMC4Q7Z404 712 aa12.15□□□□□ -0.46
APLF-204ENST00000471727 CCDC112Q8NEF3 446 aa12.15□□□□□ -0.46
APLF-204ENST00000471727 ENOX1Q8TC92 643 aaKnown RBP12.15□□□□□ -0.46
APLF-204ENST00000471727 GJD4Q96KN9 370 aaPredicted RBP12.15□□□□□ -0.46
APLF-204ENST00000471727 LZTS2Q9BRK4 669 aa12.15□□□□□ -0.46
APLF-204ENST00000471727 KAT14Q9H8E8 782 aa12.15□□□□□ -0.46
APLF-204ENST00000471727 MCM9Q9NXL9 1143 aa12.15□□□□□ -0.46
APLF-204ENST00000471727 VPS54Q9P1Q0 977 aa12.15□□□□□ -0.46
APLF-204ENST00000471727 MKRN1Q9UHC7 482 aaKnown RBP12.15□□□□□ -0.46
APLF-204ENST00000471727 BTAF1O14981 1849 aa12.15□□□□□ -0.46
APLF-204ENST00000471727 ROBO3Q96MS0 1386 aa12.15□□□□□ -0.46
APLF-204ENST00000471727 CNTNAP5Q8WYK1 1306 aa12.15□□□□□ -0.46
APLF-204ENST00000471727 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.15□□□□□ -0.47
APLF-204ENST00000471727 POLR2DO15514 142 aaKnown RBP12.15□□□□□ -0.47
APLF-204ENST00000471727 PRDM1O75626 825 aa12.15□□□□□ -0.47
APLF-204ENST00000471727 BBOX1O75936 387 aa12.15□□□□□ -0.47
APLF-204ENST00000471727 PLEKHA8P1O95397 391 aa12.15□□□□□ -0.47
APLF-204ENST00000471727 SFPQP23246 707 aaKnown RBP eCLIP12.15□□□□□ -0.47
APLF-204ENST00000471727 ERCC5P28715 1186 aaPredicted RBP12.15□□□□□ -0.47
APLF-204ENST00000471727 UBASH3AP57075 661 aa12.15□□□□□ -0.47
APLF-204ENST00000471727 ST5P78524 1137 aa12.15□□□□□ -0.47
APLF-204ENST00000471727 CCZ1BP86790 482 aa12.15□□□□□ -0.47
APLF-204ENST00000471727 CCZ1P86791 482 aaPredicted RBP12.15□□□□□ -0.47
APLF-204ENST00000471727 NFIXQ14938 502 aa12.15□□□□□ -0.47
APLF-204ENST00000471727 PFKFB3Q16875 520 aaPredicted RBP12.15□□□□□ -0.47
APLF-204ENST00000471727 TMC6Q7Z403 805 aa12.15□□□□□ -0.47
APLF-204ENST00000471727 CMTR1Q8N1G2 835 aaKnown RBP12.15□□□□□ -0.47
APLF-204ENST00000471727 SPATA20Q8TB22 786 aa12.15□□□□□ -0.47
APLF-204ENST00000471727 OXER1Q8TDS5 423 aa12.15□□□□□ -0.47
APLF-204ENST00000471727 TNFRSF25Q93038 417 aa12.15□□□□□ -0.47
APLF-204ENST00000471727 FBXW7Q969H0 707 aa12.15□□□□□ -0.47
APLF-204ENST00000471727 RBM17Q96I25 401 aaKnown RBP12.15□□□□□ -0.47
APLF-204ENST00000471727 ECM29Q5VYK3 1845 aa12.14□□□□□ -0.47
APLF-204ENST00000471727 DLEC1Q9Y238 1755 aa12.14□□□□□ -0.47
APLF-204ENST00000471727 A0A087WWV3 80 aa12.14□□□□□ -0.47
APLF-204ENST00000471727 PSDA5PKW4 1024 aaPredicted RBP12.14□□□□□ -0.47
APLF-204ENST00000471727 SERPINC1P01008 464 aa12.14□□□□□ -0.47
APLF-204ENST00000471727 SLFN14P0C7P3 912 aa12.14□□□□□ -0.47
APLF-204ENST00000471727 NLRP5P59047 1200 aa12.14□□□□□ -0.47
APLF-204ENST00000471727 MORC3Q14149 939 aa12.14□□□□□ -0.47
APLF-204ENST00000471727 SLC27A3Q5K4L6 730 aa12.14□□□□□ -0.47
APLF-204ENST00000471727 TTC38Q5R3I4 469 aa12.14□□□□□ -0.47
APLF-204ENST00000471727 ARL6IP4Q66PJ3 421 aaKnown RBP12.14□□□□□ -0.47
APLF-204ENST00000471727 FAM196AQ6ZSG2 479 aa12.14□□□□□ -0.47
APLF-204ENST00000471727 PTF1AQ7RTS3 328 aa12.14□□□□□ -0.47
APLF-204ENST00000471727 FOXP4Q8IVH2 680 aaPredicted RBP12.14□□□□□ -0.47
APLF-204ENST00000471727 ZNF444Q8N0Y2 327 aaPredicted RBP12.14□□□□□ -0.47
APLF-204ENST00000471727 SRBD1Q8N5C6 995 aaKnown RBP12.14□□□□□ -0.47
APLF-204ENST00000471727 RPGRQ92834 1020 aaKnown RBP12.14□□□□□ -0.47
APLF-204ENST00000471727 CSRNP2Q9H175 543 aa12.14□□□□□ -0.47
APLF-204ENST00000471727 SERTAD1Q9UHV2 236 aa12.14□□□□□ -0.47
APLF-204ENST00000471727 MAN1B1Q9UKM7 699 aa12.14□□□□□ -0.47
APLF-204ENST00000471727 TAOK2Q9UL54 1235 aa12.14□□□□□ -0.47
APLF-204ENST00000471727 ACTN4O43707 911 aaKnown RBP12.13□□□□□ -0.47
APLF-204ENST00000471727 LMOD1P29536 600 aaPredicted RBP12.13□□□□□ -0.47
APLF-204ENST00000471727 ATP2C1P98194 919 aaPredicted RBP12.13□□□□□ -0.47
APLF-204ENST00000471727 PTPN14Q15678 1187 aa12.13□□□□□ -0.47
APLF-204ENST00000471727 CRY2Q49AN0 593 aa12.13□□□□□ -0.47
APLF-204ENST00000471727 TBC1D22AQ8WUA7 517 aa12.13□□□□□ -0.47
APLF-204ENST00000471727 FAM163AQ96GL9 167 aaPredicted RBP12.13□□□□□ -0.47
APLF-204ENST00000471727 GSDMAQ96QA5 445 aa12.13□□□□□ -0.47
APLF-204ENST00000471727 MKNK2Q9HBH9 465 aa12.13□□□□□ -0.47
APLF-204ENST00000471727 LY75O60449 1722 aa12.13□□□□□ -0.47
APLF-204ENST00000471727 KIAA1551Q9HCM1 1747 aa12.13□□□□□ -0.47
APLF-204ENST00000471727 CTIFO43310 598 aaKnown RBP12.12□□□□□ -0.47
APLF-204ENST00000471727 IL1R1P14778 569 aa12.12□□□□□ -0.47
APLF-204ENST00000471727 TFAP4Q01664 338 aa12.12□□□□□ -0.47
APLF-204ENST00000471727 SEMA3FQ13275 785 aa12.12□□□□□ -0.47
APLF-204ENST00000471727 GRM4Q14833 912 aa12.12□□□□□ -0.47
APLF-204ENST00000471727 GLIPR1L2Q4G1C9 344 aa12.12□□□□□ -0.47
APLF-204ENST00000471727 FAM47AQ5JRC9 791 aa12.12□□□□□ -0.47
APLF-204ENST00000471727 CEP135Q66GS9 1140 aa12.12□□□□□ -0.47
APLF-204ENST00000471727 RCSD1Q6JBY9 416 aa12.12□□□□□ -0.47
APLF-204ENST00000471727 SH3RF1Q7Z6J0 888 aa12.12□□□□□ -0.47
APLF-204ENST00000471727 TXNRD3Q86VQ6 643 aa12.12□□□□□ -0.47
APLF-204ENST00000471727 CCAR2Q8N163 923 aaKnown RBP12.12□□□□□ -0.47
APLF-204ENST00000471727 CCDC148Q8NFR7 591 aa12.12□□□□□ -0.47
APLF-204ENST00000471727 PODXL2Q9NZ53 605 aa12.12□□□□□ -0.47
APLF-204ENST00000471727 GGA1Q9UJY5 639 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms