RNA–Protein interactions for RNA: ENST00000471477.1

COL15A1-203, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 2

Gene COL15A1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-203ENST00000471477 OTUD7BQ6GQQ9 843 aa29.89■■■□□ 2.38
COL15A1-203ENST00000471477 GADL1Q6ZQY3 521 aa29.89■■■□□ 2.38
COL15A1-203ENST00000471477 KIAA1211Q6ZU35 1233 aa29.89■■■□□ 2.38
COL15A1-203ENST00000471477 USP17L10C9JJH3 530 aa29.88■■■□□ 2.37
COL15A1-203ENST00000471477 IMMTQ16891 758 aaKnown RBP29.88■■■□□ 2.37
COL15A1-203ENST00000471477 FASTKD5Q7L8L6 764 aaKnown RBP29.88■■■□□ 2.37
COL15A1-203ENST00000471477 ACER1Q8TDN7 264 aa29.88■■■□□ 2.37
COL15A1-203ENST00000471477 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.88■■■□□ 2.37
COL15A1-203ENST00000471477 SAGE1Q9NXZ1 904 aa29.88■■■□□ 2.37
COL15A1-203ENST00000471477 TSKSQ9UJT2 592 aa29.88■■■□□ 2.37
COL15A1-203ENST00000471477 MYH4Q9Y623 1939 aa29.88■■■□□ 2.37
COL15A1-203ENST00000471477 ALDH1A1P00352 501 aa29.88■■■□□ 2.37
COL15A1-203ENST00000471477 FGRP09769 529 aa29.88■■■□□ 2.37
COL15A1-203ENST00000471477 ICA1Q05084 483 aa29.88■■■□□ 2.37
COL15A1-203ENST00000471477 FAM47AQ5JRC9 791 aa29.88■■■□□ 2.37
COL15A1-203ENST00000471477 AKNAD1Q5T1N1 836 aa29.88■■■□□ 2.37
COL15A1-203ENST00000471477 STAG1Q8WVM7 1258 aa29.88■■■□□ 2.37
COL15A1-203ENST00000471477 FEZ1Q99689 392 aa29.88■■■□□ 2.37
COL15A1-203ENST00000471477 LSG1Q9H089 658 aaKnown RBP29.88■■■□□ 2.37
COL15A1-203ENST00000471477 U3KPZ7 1027 aaPredicted RBP29.88■■■□□ 2.37
COL15A1-203ENST00000471477 ORC4O43929 436 aa29.87■■■□□ 2.37
COL15A1-203ENST00000471477 SH3D19Q5HYK7 790 aa29.87■■■□□ 2.37
COL15A1-203ENST00000471477 MAP4K1Q92918 833 aa29.87■■■□□ 2.37
COL15A1-203ENST00000471477 ANO2Q9NQ90 1003 aa29.87■■■□□ 2.37
COL15A1-203ENST00000471477 TOMM22Q9NS69 142 aa29.87■■■□□ 2.37
COL15A1-203ENST00000471477 PLIN4Q96Q06 1357 aa29.86■■■□□ 2.37
COL15A1-203ENST00000471477 C19orf81C9J6K1 198 aa29.86■■■□□ 2.37
COL15A1-203ENST00000471477 TSPY3P0CV98 308 aa29.86■■■□□ 2.37
COL15A1-203ENST00000471477 TSPY8P0CW00 308 aa29.86■■■□□ 2.37
COL15A1-203ENST00000471477 ZYXQ15942 572 aaKnown RBP29.86■■■□□ 2.37
COL15A1-203ENST00000471477 RRP12Q5JTH9 1297 aaKnown RBP29.86■■■□□ 2.37
COL15A1-203ENST00000471477 GPAT2Q6NUI2 795 aa29.86■■■□□ 2.37
COL15A1-203ENST00000471477 MFSD6Q6ZSS7 791 aa29.86■■■□□ 2.37
COL15A1-203ENST00000471477 ANKRD23Q86SG2 305 aa29.86■■■□□ 2.37
COL15A1-203ENST00000471477 KANSL2Q9H9L4 492 aa29.86■■■□□ 2.37
COL15A1-203ENST00000471477 RANBP6O60518 1105 aaKnown RBP29.85■■■□□ 2.37
COL15A1-203ENST00000471477 TFAP4Q01664 338 aa29.85■■■□□ 2.37
COL15A1-203ENST00000471477 PROCA1Q8NCQ7 364 aaPredicted RBP29.85■■■□□ 2.37
COL15A1-203ENST00000471477 RNF41Q9H4P4 317 aaPredicted RBP29.85■■■□□ 2.37
COL15A1-203ENST00000471477 GTF3C3Q9Y5Q9 886 aa29.85■■■□□ 2.37
COL15A1-203ENST00000471477 RBM8AQ9Y5S9 174 aaKnown RBP29.85■■■□□ 2.37
COL15A1-203ENST00000471477 A0A1W2PRG0 241 aa29.84■■■□□ 2.37
COL15A1-203ENST00000471477 TSPY2A6NKD2 308 aa29.84■■■□□ 2.37
COL15A1-203ENST00000471477 HSPA8P11142 646 aaKnown RBP29.84■■■□□ 2.37
COL15A1-203ENST00000471477 PCP11498 1178 aaKnown RBP29.84■■■□□ 2.37
COL15A1-203ENST00000471477 SIAH1Q8IUQ4 282 aa29.84■■■□□ 2.37
COL15A1-203ENST00000471477 NEDD1Q8NHV4 660 aa29.84■■■□□ 2.37
COL15A1-203ENST00000471477 KIAA1683Q9H0B3 1180 aa29.84■■■□□ 2.37
COL15A1-203ENST00000471477 ARHGEF10LQ9HCE6 1279 aa29.84■■■□□ 2.37
COL15A1-203ENST00000471477 ZCCHC17Q9NP64 241 aaKnown RBP29.84■■■□□ 2.37
COL15A1-203ENST00000471477 TMOD4Q9NZQ9 345 aa29.84■■■□□ 2.37
COL15A1-203ENST00000471477 NEDD4P46934 1319 aa29.83■■■□□ 2.37
COL15A1-203ENST00000471477 IGKV6D-41A0A0C4DH26 115 aa29.83■■■□□ 2.37
COL15A1-203ENST00000471477 PDHXO00330 501 aa29.83■■■□□ 2.37
COL15A1-203ENST00000471477 TBC1D8O95759 1140 aa29.83■■■□□ 2.37
COL15A1-203ENST00000471477 EEF2P13639 858 aaKnown RBP29.83■■■□□ 2.37
COL15A1-203ENST00000471477 ATP2B2Q01814 1243 aa29.83■■■□□ 2.37
COL15A1-203ENST00000471477 TREML2Q5T2D2 321 aa29.83■■■□□ 2.37
COL15A1-203ENST00000471477 USP17L2Q6R6M4 530 aa29.83■■■□□ 2.37
COL15A1-203ENST00000471477 EMILIN3Q9NT22 766 aa29.83■■■□□ 2.37
COL15A1-203ENST00000471477 AGTPBP1Q9UPW5 1226 aa29.83■■■□□ 2.37
COL15A1-203ENST00000471477 TAF1CQ15572 869 aaPredicted RBP29.82■■■□□ 2.36
COL15A1-203ENST00000471477 CYP21A2P08686 494 aa29.81■■■□□ 2.36
COL15A1-203ENST00000471477 USP14P54578 494 aa29.81■■■□□ 2.36
COL15A1-203ENST00000471477 CRHR2Q13324 411 aa29.81■■■□□ 2.36
COL15A1-203ENST00000471477 CEP95Q96GE4 821 aa29.81■■■□□ 2.36
COL15A1-203ENST00000471477 CFHR5Q9BXR6 569 aa29.81■■■□□ 2.36
COL15A1-203ENST00000471477 PRDM10Q9NQV6 1147 aa29.81■■■□□ 2.36
COL15A1-203ENST00000471477 R3HDMLQ9H3Y0 253 aa29.8■■■□□ 2.36
COL15A1-203ENST00000471477 LBX1P52954 281 aa29.79■■■□□ 2.36
COL15A1-203ENST00000471477 NKX2-3Q8TAU0 364 aa29.79■■■□□ 2.36
COL15A1-203ENST00000471477 C12orf42Q96LP6 360 aa29.79■■■□□ 2.36
COL15A1-203ENST00000471477 SH2D4AQ9H788 454 aa29.79■■■□□ 2.36
COL15A1-203ENST00000471477 MTMR4Q9NYA4 1195 aa29.79■■■□□ 2.36
COL15A1-203ENST00000471477 TMX2Q9Y320 296 aa29.79■■■□□ 2.36
COL15A1-203ENST00000471477 ZFYVE28Q9HCC9 887 aa29.79■■■□□ 2.36
COL15A1-203ENST00000471477 NYAP2Q9P242 653 aa29.79■■■□□ 2.36
COL15A1-203ENST00000471477 SLC45A1Q9Y2W3 748 aa29.79■■■□□ 2.36
COL15A1-203ENST00000471477 TAF6LQ9Y6J9 622 aa29.78■■■□□ 2.36
COL15A1-203ENST00000471477 CASP8AP2Q9UKL3 1982 aa29.77■■■□□ 2.36
COL15A1-203ENST00000471477 NMT2O60551 498 aa29.77■■■□□ 2.36
COL15A1-203ENST00000471477 ESR2Q92731 530 aa29.77■■■□□ 2.36
COL15A1-203ENST00000471477 IL17RBQ9NRM6 502 aa29.77■■■□□ 2.36
COL15A1-203ENST00000471477 CLIP2Q9UDT6 1046 aa29.77■■■□□ 2.36
COL15A1-203ENST00000471477 B4E1Z4 1266 aa29.76■■■□□ 2.35
COL15A1-203ENST00000471477 TTLL1O95922 423 aa29.76■■■□□ 2.35
COL15A1-203ENST00000471477 CYP2C8P10632 490 aa29.76■■■□□ 2.35
COL15A1-203ENST00000471477 VCAM1P19320 739 aa29.76■■■□□ 2.35
COL15A1-203ENST00000471477 PABPC4Q13310 644 aaKnown RBP eCLIP29.76■■■□□ 2.35
COL15A1-203ENST00000471477 KIAA1755Q5JYT7 1200 aa29.76■■■□□ 2.35
COL15A1-203ENST00000471477 PARK7Q99497 189 aaKnown RBP29.76■■■□□ 2.35
COL15A1-203ENST00000471477 VCPKMTQ9H867 229 aa29.76■■■□□ 2.35
COL15A1-203ENST00000471477 KDM4AO75164 1064 aa29.75■■■□□ 2.35
COL15A1-203ENST00000471477 KRT23Q9C075 422 aa29.75■■■□□ 2.35
COL15A1-203ENST00000471477 CNNM2Q9H8M5 875 aa29.75■■■□□ 2.35
COL15A1-203ENST00000471477 NECTIN1Q15223 517 aa29.74■■■□□ 2.35
COL15A1-203ENST00000471477 PNMA3Q9UL41 463 aa29.74■■■□□ 2.35
COL15A1-203ENST00000471477 E7EWF7 191 aa29.73■■■□□ 2.35
COL15A1-203ENST00000471477 SLC27A2O14975 620 aa29.73■■■□□ 2.35
COL15A1-203ENST00000471477 HOXA7P31268 230 aaPredicted RBP29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms