RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 RNF208Q9H0X6 261 aa18.54■□□□□ 0.56
COL1A1-203ENST00000471344 RBPJLQ9UBG7 517 aa18.54■□□□□ 0.56
COL1A1-203ENST00000471344 MPHOSPH10O00566 681 aaKnown RBP18.53■□□□□ 0.56
COL1A1-203ENST00000471344 IRF5Q13568 498 aa18.53■□□□□ 0.56
COL1A1-203ENST00000471344 UBE3CQ15386 1083 aa18.53■□□□□ 0.56
COL1A1-203ENST00000471344 Q3C1V9 767 aa18.53■□□□□ 0.56
COL1A1-203ENST00000471344 C12orf42Q96LP6 360 aa18.53■□□□□ 0.56
COL1A1-203ENST00000471344 CRBNQ96SW2 442 aa18.53■□□□□ 0.56
COL1A1-203ENST00000471344 PAGR1Q9BTK6 254 aa18.53■□□□□ 0.56
COL1A1-203ENST00000471344 GJD2Q9UKL4 321 aa18.53■□□□□ 0.56
COL1A1-203ENST00000471344 A0A1W2PRG0 241 aa18.52■□□□□ 0.56
COL1A1-203ENST00000471344 VCAM1P19320 739 aa18.52■□□□□ 0.56
COL1A1-203ENST00000471344 UBXN2AP68543 259 aa18.52■□□□□ 0.56
COL1A1-203ENST00000471344 TRIM32Q13049 653 aa18.52■□□□□ 0.56
COL1A1-203ENST00000471344 KIAA1683Q9H0B3 1180 aa18.52■□□□□ 0.56
COL1A1-203ENST00000471344 PORCNQ9H237 461 aa18.52■□□□□ 0.56
COL1A1-203ENST00000471344 CABP5Q9NP86 173 aa18.52■□□□□ 0.56
COL1A1-203ENST00000471344 CNMDO75829 334 aa18.51■□□□□ 0.55
COL1A1-203ENST00000471344 GJB1P08034 283 aa18.51■□□□□ 0.55
COL1A1-203ENST00000471344 AKR1B1P15121 316 aa18.51■□□□□ 0.55
COL1A1-203ENST00000471344 GJA8P48165 433 aa18.51■□□□□ 0.55
COL1A1-203ENST00000471344 KIAA1755Q5JYT7 1200 aa18.51■□□□□ 0.55
COL1A1-203ENST00000471344 PXYLP1Q8TE99 480 aa18.51■□□□□ 0.55
COL1A1-203ENST00000471344 SLC4A4Q9Y6R1 1079 aa18.51■□□□□ 0.55
COL1A1-203ENST00000471344 USP17L12C9JPN9 530 aa18.5■□□□□ 0.55
COL1A1-203ENST00000471344 USP17L21D6R901 530 aa18.5■□□□□ 0.55
COL1A1-203ENST00000471344 ERVK-9P63128 1117 aa18.5■□□□□ 0.55
COL1A1-203ENST00000471344 ERVK-24P63145 666 aa18.5■□□□□ 0.55
COL1A1-203ENST00000471344 C12orf60Q5U649 245 aa18.5■□□□□ 0.55
COL1A1-203ENST00000471344 GPRC5AQ8NFJ5 357 aa18.5■□□□□ 0.55
COL1A1-203ENST00000471344 U2AF1L4Q8WU68 220 aaKnown RBP18.5■□□□□ 0.55
COL1A1-203ENST00000471344 RPAP3Q9H6T3 665 aaPredicted RBP18.5■□□□□ 0.55
COL1A1-203ENST00000471344 ATP8A2Q9NTI2 1148 aa18.5■□□□□ 0.55
COL1A1-203ENST00000471344 USP17L15C9J2P7 530 aa18.49■□□□□ 0.55
COL1A1-203ENST00000471344 USP17L13C9JLJ4 530 aa18.49■□□□□ 0.55
COL1A1-203ENST00000471344 USP17L11C9JVI0 530 aa18.49■□□□□ 0.55
COL1A1-203ENST00000471344 USP17L18D6R9N7 530 aa18.49■□□□□ 0.55
COL1A1-203ENST00000471344 USP17L22D6RA61 530 aa18.49■□□□□ 0.55
COL1A1-203ENST00000471344 USP17L17D6RBQ6 530 aa18.49■□□□□ 0.55
COL1A1-203ENST00000471344 USP17L19D6RCP7 530 aa18.49■□□□□ 0.55
COL1A1-203ENST00000471344 USP17L20D6RJB6 530 aa18.49■□□□□ 0.55
COL1A1-203ENST00000471344 USP14P54578 494 aa18.49■□□□□ 0.55
COL1A1-203ENST00000471344 USP17L24Q0WX57 530 aa18.49■□□□□ 0.55
COL1A1-203ENST00000471344 CTR9Q6PD62 1173 aa18.49■□□□□ 0.55
COL1A1-203ENST00000471344 CATSPERGQ6ZRH7 1159 aa18.49■□□□□ 0.55
COL1A1-203ENST00000471344 UBE2Q1Q7Z7E8 422 aa18.49■□□□□ 0.55
COL1A1-203ENST00000471344 SIAH1Q8IUQ4 282 aa18.49■□□□□ 0.55
COL1A1-203ENST00000471344 KBTBD3Q8NAB2 608 aa18.49■□□□□ 0.55
COL1A1-203ENST00000471344 OSBP2Q969R2 916 aa18.49■□□□□ 0.55
COL1A1-203ENST00000471344 RLFQ13129 1914 aa18.49■□□□□ 0.55
COL1A1-203ENST00000471344 CYP2B6P20813 491 aa18.48■□□□□ 0.55
COL1A1-203ENST00000471344 CDK8P49336 464 aa18.48■□□□□ 0.55
COL1A1-203ENST00000471344 ZSCAN25Q6NSZ9 544 aa18.48■□□□□ 0.55
COL1A1-203ENST00000471344 PI4K2BQ8TCG2 481 aa18.48■□□□□ 0.55
COL1A1-203ENST00000471344 TRIB2Q92519 343 aa18.48■□□□□ 0.55
COL1A1-203ENST00000471344 GPATCH3Q96I76 525 aa18.48■□□□□ 0.55
COL1A1-203ENST00000471344 DEFB118Q96PH6 123 aa18.48■□□□□ 0.55
COL1A1-203ENST00000471344 STRBPQ96SI9 672 aaKnown RBP18.48■□□□□ 0.55
COL1A1-203ENST00000471344 BTBD7Q9P203 1132 aa18.48■□□□□ 0.55
COL1A1-203ENST00000471344 SWAP70Q9UH65 585 aa18.48■□□□□ 0.55
COL1A1-203ENST00000471344 A0A0G2JMZ2 1700 aa18.47■□□□□ 0.55
COL1A1-203ENST00000471344 SPDYE16A6NNV3 312 aaPredicted RBP18.47■□□□□ 0.55
COL1A1-203ENST00000471344 M0R2C6 588 aa18.47■□□□□ 0.55
COL1A1-203ENST00000471344 SLC34A2O95436 690 aa18.47■□□□□ 0.55
COL1A1-203ENST00000471344 TMEM179Q6ZVK1 233 aa18.47■□□□□ 0.55
COL1A1-203ENST00000471344 C16orf86Q6ZW13 317 aa18.47■□□□□ 0.55
COL1A1-203ENST00000471344 STK11IPQ8N1F8 1099 aa18.47■□□□□ 0.55
COL1A1-203ENST00000471344 EPB41L4AQ9HCS5 686 aaPredicted RBP18.47■□□□□ 0.55
COL1A1-203ENST00000471344 PAK6Q9NQU5 681 aaPredicted RBP18.47■□□□□ 0.55
COL1A1-203ENST00000471344 SGPL1O95470 568 aa18.46■□□□□ 0.55
COL1A1-203ENST00000471344 HMGCRP04035 888 aa18.46■□□□□ 0.55
COL1A1-203ENST00000471344 GPR142Q7Z601 462 aa18.46■□□□□ 0.55
COL1A1-203ENST00000471344 GREB1LQ9C091 1923 aaPredicted RBP18.45■□□□□ 0.54
COL1A1-203ENST00000471344 PARP14Q460N5 1801 aa18.45■□□□□ 0.54
COL1A1-203ENST00000471344 GSG1L2A8MUP6 293 aa18.45■□□□□ 0.54
COL1A1-203ENST00000471344 RNF113AO15541 343 aaKnown RBP18.45■□□□□ 0.54
COL1A1-203ENST00000471344 MAPK4P31152 587 aa18.45■□□□□ 0.54
COL1A1-203ENST00000471344 ICA1Q05084 483 aa18.45■□□□□ 0.54
COL1A1-203ENST00000471344 CCL14Q16627 93 aa18.45■□□□□ 0.54
COL1A1-203ENST00000471344 SPICE1Q8N0Z3 855 aa18.45■□□□□ 0.54
COL1A1-203ENST00000471344 NKX2-3Q8TAU0 364 aa18.45■□□□□ 0.54
COL1A1-203ENST00000471344 APPBP2Q92624 585 aa18.45■□□□□ 0.54
COL1A1-203ENST00000471344 USP6NLQ92738 828 aa18.45■□□□□ 0.54
COL1A1-203ENST00000471344 SEC62Q99442 399 aaKnown RBP18.45■□□□□ 0.54
COL1A1-203ENST00000471344 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.45■□□□□ 0.54
COL1A1-203ENST00000471344 RABGAP1Q9Y3P9 1069 aa18.45■□□□□ 0.54
COL1A1-203ENST00000471344 CEP290O15078 2479 aa18.45■□□□□ 0.54
COL1A1-203ENST00000471344 SALL3Q9BXA9 1300 aa18.45■□□□□ 0.54
COL1A1-203ENST00000471344 GPAA1O43292 621 aa18.44■□□□□ 0.54
COL1A1-203ENST00000471344 FARP2O94887 1054 aaPredicted RBP18.44■□□□□ 0.54
COL1A1-203ENST00000471344 MORN1Q5T089 497 aa18.44■□□□□ 0.54
COL1A1-203ENST00000471344 PLEKHH3Q7Z736 793 aa18.44■□□□□ 0.54
COL1A1-203ENST00000471344 GTF3C2Q8WUA4 911 aaPredicted RBP18.44■□□□□ 0.54
COL1A1-203ENST00000471344 NUDT12Q9BQG2 462 aa18.44■□□□□ 0.54
COL1A1-203ENST00000471344 TANGO6Q9C0B7 1094 aa18.44■□□□□ 0.54
COL1A1-203ENST00000471344 RANBP2P49792 3224 aaKnown RBP18.44■□□□□ 0.54
COL1A1-203ENST00000471344 TTC41PQ6P2S7 1318 aa18.44■□□□□ 0.54
COL1A1-203ENST00000471344 LBX2Q6XYB7 198 aa18.43■□□□□ 0.54
COL1A1-203ENST00000471344 AMOTL1Q8IY63 956 aa18.43■□□□□ 0.54
COL1A1-203ENST00000471344 DIS3LQ8TF46 1054 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms