RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 ZCCHC4Q9H5U6 513 aa4.51□□□□□ -1.69
UBXN4-206ENST00000470687 COPRSQ9NQ92 184 aa4.51□□□□□ -1.69
UBXN4-206ENST00000470687 SLAMF8Q9P0V8 285 aa4.51□□□□□ -1.69
UBXN4-206ENST00000470687 CCDC9Q9Y3X0 531 aaKnown RBP4.51□□□□□ -1.69
UBXN4-206ENST00000470687 CNTNAP4Q9C0A0 1308 aa4.5□□□□□ -1.69
UBXN4-206ENST00000470687 DCDC2CA8MYV0 355 aa4.5□□□□□ -1.69
UBXN4-206ENST00000470687 CELA3AP09093 270 aa4.5□□□□□ -1.69
UBXN4-206ENST00000470687 USP17L7P0C7H9 530 aa4.5□□□□□ -1.69
UBXN4-206ENST00000470687 BMP7P18075 431 aa4.5□□□□□ -1.69
UBXN4-206ENST00000470687 NME2P22392 152 aa4.5□□□□□ -1.69
UBXN4-206ENST00000470687 VAMP1P23763 118 aa4.5□□□□□ -1.69
UBXN4-206ENST00000470687 CDK8P49336 464 aa4.5□□□□□ -1.69
UBXN4-206ENST00000470687 KRTAP10-2P60368 255 aa4.5□□□□□ -1.69
UBXN4-206ENST00000470687 ERVFC1P60507 584 aa4.5□□□□□ -1.69
UBXN4-206ENST00000470687 FGD1P98174 961 aa4.5□□□□□ -1.69
UBXN4-206ENST00000470687 ALG1LQ6GMV1 187 aa4.5□□□□□ -1.69
UBXN4-206ENST00000470687 THAP5Q7Z6K1 395 aa4.5□□□□□ -1.69
UBXN4-206ENST00000470687 KCNC2Q96PR1 638 aa4.5□□□□□ -1.69
UBXN4-206ENST00000470687 EMILIN2Q9BXX0 1053 aa4.5□□□□□ -1.69
UBXN4-206ENST00000470687 PICK1Q9NRD5 415 aa4.5□□□□□ -1.69
UBXN4-206ENST00000470687 CAPN6Q9Y6Q1 641 aa4.5□□□□□ -1.69
UBXN4-206ENST00000470687 DNAJC25-GNG10A0A024R161 153 aa4.49□□□□□ -1.69
UBXN4-206ENST00000470687 F6X3S4 739 aa4.49□□□□□ -1.69
UBXN4-206ENST00000470687 LRIG2O94898 1065 aa4.49□□□□□ -1.69
UBXN4-206ENST00000470687 SYN1P17600 705 aa4.49□□□□□ -1.69
UBXN4-206ENST00000470687 RACK1P63244 317 aaKnown RBP4.49□□□□□ -1.69
UBXN4-206ENST00000470687 FANCCQ00597 558 aa4.49□□□□□ -1.69
UBXN4-206ENST00000470687 RALGPS1Q5JS13 557 aa4.49□□□□□ -1.69
UBXN4-206ENST00000470687 SFRP5Q5T4F7 317 aa4.49□□□□□ -1.69
UBXN4-206ENST00000470687 CDC37L1Q7L3B6 337 aa4.49□□□□□ -1.69
UBXN4-206ENST00000470687 C12orf40Q86WS4 652 aa4.49□□□□□ -1.69
UBXN4-206ENST00000470687 KCT2Q8NC54 265 aa4.49□□□□□ -1.69
UBXN4-206ENST00000470687 GRIN3AQ8TCU5 1115 aa4.49□□□□□ -1.69
UBXN4-206ENST00000470687 MYLIPQ8WY64 445 aa4.49□□□□□ -1.69
UBXN4-206ENST00000470687 NECAB3Q96P71 396 aaPredicted RBP4.49□□□□□ -1.69
UBXN4-206ENST00000470687 CBX8Q9HC52 389 aa4.49□□□□□ -1.69
UBXN4-206ENST00000470687 TMEM59LQ9UK28 342 aa4.49□□□□□ -1.69
UBXN4-206ENST00000470687 TPX2Q9ULW0 747 aaKnown RBP4.49□□□□□ -1.69
UBXN4-206ENST00000470687 HPXP02790 462 aa4.48□□□□□ -1.69
UBXN4-206ENST00000470687 XRCC5P13010 732 aaKnown RBP4.48□□□□□ -1.69
UBXN4-206ENST00000470687 HDLBPQ00341 1268 aaKnown RBP4.48□□□□□ -1.69
UBXN4-206ENST00000470687 NFIXQ14938 502 aa4.48□□□□□ -1.69
UBXN4-206ENST00000470687 BAHD1Q8TBE0 780 aaPredicted RBP4.48□□□□□ -1.69
UBXN4-206ENST00000470687 TRIM37O94972 964 aa4.47□□□□□ -1.69
UBXN4-206ENST00000470687 HK2P52789 917 aa4.47□□□□□ -1.69
UBXN4-206ENST00000470687 DLG4P78352 724 aa4.47□□□□□ -1.69
UBXN4-206ENST00000470687 C9orf131Q5VYM1 1079 aa4.47□□□□□ -1.69
UBXN4-206ENST00000470687 ERMP1Q7Z2K6 904 aa4.47□□□□□ -1.69
UBXN4-206ENST00000470687 UBE2FQ969M7 185 aa4.47□□□□□ -1.69
UBXN4-206ENST00000470687 MIPEPQ99797 713 aa4.47□□□□□ -1.69
UBXN4-206ENST00000470687 MCOLN1Q9GZU1 580 aa4.47□□□□□ -1.69
UBXN4-206ENST00000470687 RNF32Q9H0A6 362 aa4.47□□□□□ -1.69
UBXN4-206ENST00000470687 RTEL1Q9NZ71 1219 aa4.47□□□□□ -1.69
UBXN4-206ENST00000470687 SMARCA2P51531 1590 aa4.46□□□□□ -1.7
UBXN4-206ENST00000470687 CUX2O14529 1486 aa4.46□□□□□ -1.7
UBXN4-206ENST00000470687 TRIM13O60858 407 aa4.46□□□□□ -1.7
UBXN4-206ENST00000470687 ESR1P03372 595 aa4.46□□□□□ -1.7
UBXN4-206ENST00000470687 TRHRP34981 398 aaPredicted RBP4.46□□□□□ -1.7
UBXN4-206ENST00000470687 MARCH10Q8NA82 808 aaPredicted RBP4.46□□□□□ -1.7
UBXN4-206ENST00000470687 ZNF507Q8TCN5 953 aa4.46□□□□□ -1.7
UBXN4-206ENST00000470687 GAL3ST3Q96A11 431 aa4.46□□□□□ -1.7
UBXN4-206ENST00000470687 FBRSQ9HAH7 460 aa4.46□□□□□ -1.7
UBXN4-206ENST00000470687 SP110Q9HB58 689 aa4.46□□□□□ -1.7
UBXN4-206ENST00000470687 ZSWIM5Q9P217 1185 aa4.46□□□□□ -1.7
UBXN4-206ENST00000470687 TLR6Q9Y2C9 796 aa4.46□□□□□ -1.7
UBXN4-206ENST00000470687 PCDHB5Q9Y5E4 795 aa4.46□□□□□ -1.7
UBXN4-206ENST00000470687 MYOCOSA0A1B0GUC4 107 aa4.45□□□□□ -1.7
UBXN4-206ENST00000470687 SEMA7AO75326 666 aa4.45□□□□□ -1.7
UBXN4-206ENST00000470687 TFE3P19532 575 aaPredicted RBP4.45□□□□□ -1.7
UBXN4-206ENST00000470687 RBM25P49756 843 aaKnown RBP4.45□□□□□ -1.7
UBXN4-206ENST00000470687 NFKB2Q00653 900 aa4.45□□□□□ -1.7
UBXN4-206ENST00000470687 SLBPQ14493 270 aaKnown RBP eCLIP4.45□□□□□ -1.7
UBXN4-206ENST00000470687 SKOR2Q2VWA4 1001 aaPredicted RBP4.45□□□□□ -1.7
UBXN4-206ENST00000470687 TCERG1LQ5VWI1 586 aa4.45□□□□□ -1.7
UBXN4-206ENST00000470687 TPTE2Q6XPS3 522 aa4.45□□□□□ -1.7
UBXN4-206ENST00000470687 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.45□□□□□ -1.7
UBXN4-206ENST00000470687 TMPRSS7Q7RTY8 843 aa4.45□□□□□ -1.7
UBXN4-206ENST00000470687 GGNQ86UU5 652 aa4.45□□□□□ -1.7
UBXN4-206ENST00000470687 IRF2BP1Q8IU81 584 aa4.45□□□□□ -1.7
UBXN4-206ENST00000470687 CXorf38Q8TB03 319 aa4.45□□□□□ -1.7
UBXN4-206ENST00000470687 RHOVQ96L33 236 aa4.45□□□□□ -1.7
UBXN4-206ENST00000470687 KRTAP9-8Q9BYQ0 159 aa4.45□□□□□ -1.7
UBXN4-206ENST00000470687 ADAMTS10Q9H324 1103 aa4.45□□□□□ -1.7
UBXN4-206ENST00000470687 PPP4R2Q9NY27 417 aa4.45□□□□□ -1.7
UBXN4-206ENST00000470687 FAM8A1Q9UBU6 413 aa4.45□□□□□ -1.7
UBXN4-206ENST00000470687 AKAP2Q9Y2D5 859 aa4.45□□□□□ -1.7
UBXN4-206ENST00000470687 ATAD2BQ9ULI0 1458 aa4.44□□□□□ -1.7
UBXN4-206ENST00000470687 SORBS3O60504 671 aa4.44□□□□□ -1.7
UBXN4-206ENST00000470687 PEX10O60683 326 aa4.44□□□□□ -1.7
UBXN4-206ENST00000470687 CBX7O95931 251 aa4.44□□□□□ -1.7
UBXN4-206ENST00000470687 CAP2P40123 477 aa4.44□□□□□ -1.7
UBXN4-206ENST00000470687 TNK2Q07912 1038 aa4.44□□□□□ -1.7
UBXN4-206ENST00000470687 PSMD2Q13200 908 aa4.44□□□□□ -1.7
UBXN4-206ENST00000470687 NKG7Q16617 165 aa4.44□□□□□ -1.7
UBXN4-206ENST00000470687 ZNF394Q53GI3 561 aa4.44□□□□□ -1.7
UBXN4-206ENST00000470687 ZNF746Q6NUN9 644 aaPredicted RBP4.44□□□□□ -1.7
UBXN4-206ENST00000470687 PRRT2Q7Z6L0 340 aaPredicted RBP4.44□□□□□ -1.7
UBXN4-206ENST00000470687 ZNF605Q86T29 641 aa4.44□□□□□ -1.7
UBXN4-206ENST00000470687 MFSD2AQ8NA29 543 aa4.44□□□□□ -1.7
UBXN4-206ENST00000470687 RIN3Q8TB24 985 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms