RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 USP17L13C9JLJ4 530 aa37.82■■■■□ 3.64
HMG20B-209ENST00000470356 USP17L11C9JVI0 530 aa37.82■■■■□ 3.64
HMG20B-209ENST00000470356 USP17L18D6R9N7 530 aa37.82■■■■□ 3.64
HMG20B-209ENST00000470356 USP17L22D6RA61 530 aa37.82■■■■□ 3.64
HMG20B-209ENST00000470356 USP17L17D6RBQ6 530 aa37.82■■■■□ 3.64
HMG20B-209ENST00000470356 USP17L19D6RCP7 530 aa37.82■■■■□ 3.64
HMG20B-209ENST00000470356 USP17L20D6RJB6 530 aa37.82■■■■□ 3.64
HMG20B-209ENST00000470356 GUCY1A2P33402 732 aa37.82■■■■□ 3.64
HMG20B-209ENST00000470356 EVX2Q03828 476 aa37.82■■■■□ 3.64
HMG20B-209ENST00000470356 USP17L24Q0WX57 530 aa37.82■■■■□ 3.64
HMG20B-209ENST00000470356 SLFNL1Q499Z3 407 aa37.82■■■■□ 3.64
HMG20B-209ENST00000470356 MBD4O95243 580 aa37.81■■■■□ 3.64
HMG20B-209ENST00000470356 ERVK-9P63128 1117 aa37.81■■■■□ 3.64
HMG20B-209ENST00000470356 ERVK-24P63145 666 aa37.81■■■■□ 3.64
HMG20B-209ENST00000470356 UBE3CQ15386 1083 aa37.81■■■■□ 3.64
HMG20B-209ENST00000470356 POTEEQ6S8J3 1075 aa37.81■■■■□ 3.64
HMG20B-209ENST00000470356 ATP8A2Q9NTI2 1148 aa37.81■■■■□ 3.64
HMG20B-209ENST00000470356 HMGCRP04035 888 aa37.8■■■■□ 3.64
HMG20B-209ENST00000470356 MAPK4P31152 587 aa37.8■■■■□ 3.64
HMG20B-209ENST00000470356 Q3C1V9 767 aa37.8■■■■□ 3.64
HMG20B-209ENST00000470356 DEFB118Q96PH6 123 aa37.8■■■■□ 3.64
HMG20B-209ENST00000470356 DCTPP1Q9H773 170 aa37.8■■■■□ 3.64
HMG20B-209ENST00000470356 BAZ2AQ9UIF9 1905 aaKnown RBP37.8■■■■□ 3.64
HMG20B-209ENST00000470356 PRKAB2O43741 272 aa37.79■■■■□ 3.64
HMG20B-209ENST00000470356 CYP2D6P10635 497 aa37.79■■■■□ 3.64
HMG20B-209ENST00000470356 SEPT2Q15019 361 aa37.79■■■■□ 3.64
HMG20B-209ENST00000470356 VCAM1P19320 739 aa37.78■■■■□ 3.64
HMG20B-209ENST00000470356 CATSPERGQ6ZRH7 1159 aa37.78■■■■□ 3.64
HMG20B-209ENST00000470356 PAGR1Q9BTK6 254 aa37.78■■■■□ 3.64
HMG20B-209ENST00000470356 ECHDC1Q9NTX5 307 aa37.78■■■■□ 3.64
HMG20B-209ENST00000470356 SWAP70Q9UH65 585 aa37.78■■■■□ 3.64
HMG20B-209ENST00000470356 MYH8P13535 1937 aa37.77■■■■□ 3.64
HMG20B-209ENST00000470356 FARP2O94887 1054 aaPredicted RBP37.77■■■■□ 3.64
HMG20B-209ENST00000470356 TFRCP02786 760 aaKnown RBP37.77■■■■□ 3.64
HMG20B-209ENST00000470356 ZSCAN25Q6NSZ9 544 aa37.77■■■■□ 3.64
HMG20B-209ENST00000470356 SOCS4Q8WXH5 440 aa37.77■■■■□ 3.64
HMG20B-209ENST00000470356 NUDT12Q9BQG2 462 aa37.77■■■■□ 3.64
HMG20B-209ENST00000470356 RABGAP1Q9Y3P9 1069 aa37.77■■■■□ 3.64
HMG20B-209ENST00000470356 XRCC5P13010 732 aaKnown RBP37.76■■■■□ 3.64
HMG20B-209ENST00000470356 HABP4Q5JVS0 413 aaKnown RBP37.76■■■■□ 3.64
HMG20B-209ENST00000470356 CCAR1Q8IX12 1150 aaKnown RBP37.76■■■■□ 3.64
HMG20B-209ENST00000470356 DPF3Q92784 378 aa37.76■■■■□ 3.64
HMG20B-209ENST00000470356 HTATIP2Q9BUP3 242 aa37.76■■■■□ 3.64
HMG20B-209ENST00000470356 CRISPLD2Q9H0B8 497 aa37.76■■■■□ 3.64
HMG20B-209ENST00000470356 PORCNQ9H237 461 aa37.76■■■■□ 3.64
HMG20B-209ENST00000470356 H0YGN5 161 aa37.75■■■■□ 3.63
HMG20B-209ENST00000470356 MPHOSPH10O00566 681 aaKnown RBP37.75■■■■□ 3.63
HMG20B-209ENST00000470356 SLC44A5Q8NCS7 719 aa37.75■■■■□ 3.63
HMG20B-209ENST00000470356 XRN2Q9H0D6 950 aaKnown RBP eCLIP37.75■■■■□ 3.63
HMG20B-209ENST00000470356 CHGBP05060 677 aa37.74■■■■□ 3.63
HMG20B-209ENST00000470356 CYP2B6P20813 491 aa37.74■■■■□ 3.63
HMG20B-209ENST00000470356 RPTORQ8N122 1335 aa37.73■■■■□ 3.63
HMG20B-209ENST00000470356 LBX2Q6XYB7 198 aa37.73■■■■□ 3.63
HMG20B-209ENST00000470356 TMEM179Q6ZVK1 233 aa37.73■■■■□ 3.63
HMG20B-209ENST00000470356 TRIB2Q92519 343 aa37.73■■■■□ 3.63
HMG20B-209ENST00000470356 DYNLL2Q96FJ2 89 aa37.73■■■■□ 3.63
HMG20B-209ENST00000470356 A0A1W2PRG0 241 aa37.72■■■■□ 3.63
HMG20B-209ENST00000470356 CNMDO75829 334 aa37.72■■■■□ 3.63
HMG20B-209ENST00000470356 C12orf60Q5U649 245 aa37.72■■■■□ 3.63
HMG20B-209ENST00000470356 GPR142Q7Z601 462 aa37.72■■■■□ 3.63
HMG20B-209ENST00000470356 USP6NLQ92738 828 aa37.72■■■■□ 3.63
HMG20B-209ENST00000470356 RPAP3Q9H6T3 665 aaPredicted RBP37.72■■■■□ 3.63
HMG20B-209ENST00000470356 HMX1Q9NP08 348 aaPredicted RBP37.72■■■■□ 3.63
HMG20B-209ENST00000470356 TRIOBPQ9H2D6 2365 aa37.72■■■■□ 3.63
HMG20B-209ENST00000470356 CCNA1P78396 465 aa37.71■■■■□ 3.63
HMG20B-209ENST00000470356 TRIM32Q13049 653 aa37.71■■■■□ 3.63
HMG20B-209ENST00000470356 PLEKHH3Q7Z736 793 aa37.71■■■■□ 3.63
HMG20B-209ENST00000470356 DDRGK1Q96HY6 314 aa37.71■■■■□ 3.63
HMG20B-209ENST00000470356 USP17L12C9JPN9 530 aa37.7■■■■□ 3.63
HMG20B-209ENST00000470356 USP17L21D6R901 530 aa37.7■■■■□ 3.63
HMG20B-209ENST00000470356 MORN1Q5T089 497 aa37.7■■■■□ 3.63
HMG20B-209ENST00000470356 AMOTL1Q8IY63 956 aa37.7■■■■□ 3.63
HMG20B-209ENST00000470356 TRMT44Q8IYL2 757 aaKnown RBP37.7■■■■□ 3.63
HMG20B-209ENST00000470356 GPATCH3Q96I76 525 aa37.7■■■■□ 3.63
HMG20B-209ENST00000470356 PUS7LQ9H0K6 701 aaKnown RBP37.7■■■■□ 3.63
HMG20B-209ENST00000470356 SLC4A4Q9Y6R1 1079 aa37.7■■■■□ 3.63
HMG20B-209ENST00000470356 MAP3K21Q5TCX8 1036 aa37.68■■■■□ 3.62
HMG20B-209ENST00000470356 CCDC17Q96LX7 622 aa37.68■■■■□ 3.62
HMG20B-209ENST00000470356 CYP2D7A0A087X1C5 515 aa37.67■■■■□ 3.62
HMG20B-209ENST00000470356 SPDYE16A6NNV3 312 aaPredicted RBP37.67■■■■□ 3.62
HMG20B-209ENST00000470356 RGS2P41220 211 aa37.67■■■■□ 3.62
HMG20B-209ENST00000470356 COLQQ9Y215 455 aaPredicted RBP37.67■■■■□ 3.62
HMG20B-209ENST00000470356 GLRX3O76003 335 aaKnown RBP37.66■■■■□ 3.62
HMG20B-209ENST00000470356 AKR1B1P15121 316 aa37.66■■■■□ 3.62
HMG20B-209ENST00000470356 CDK8P49336 464 aa37.66■■■■□ 3.62
HMG20B-209ENST00000470356 KBTBD3Q8NAB2 608 aa37.66■■■■□ 3.62
HMG20B-209ENST00000470356 CWC22Q9HCG8 908 aaKnown RBP37.66■■■■□ 3.62
HMG20B-209ENST00000470356 BTBD7Q9P203 1132 aa37.66■■■■□ 3.62
HMG20B-209ENST00000470356 SMIM22K7EJ46 135 aa37.65■■■■□ 3.62
HMG20B-209ENST00000470356 COG2Q14746 738 aa37.65■■■■□ 3.62
HMG20B-209ENST00000470356 C16orf86Q6ZW13 317 aa37.65■■■■□ 3.62
HMG20B-209ENST00000470356 SIAH1Q8IUQ4 282 aa37.65■■■■□ 3.62
HMG20B-209ENST00000470356 ANKLE1Q8NAG6 615 aa37.65■■■■□ 3.62
HMG20B-209ENST00000470356 HOXC10Q9NYD6 342 aa37.65■■■■□ 3.62
HMG20B-209ENST00000470356 PRKAR2AP13861 404 aaKnown RBP37.64■■■■□ 3.62
HMG20B-209ENST00000470356 ZKSCAN1P17029 563 aaPredicted RBP37.64■■■■□ 3.62
HMG20B-209ENST00000470356 CTR9Q6PD62 1173 aa37.64■■■■□ 3.62
HMG20B-209ENST00000470356 STRBPQ96SI9 672 aaKnown RBP37.64■■■■□ 3.62
HMG20B-209ENST00000470356 PCDHB15Q9Y5E8 787 aa37.64■■■■□ 3.62
HMG20B-209ENST00000470356 PAWRQ96IZ0 340 aaKnown RBP37.63■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms