RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 SH2B1Q9NRF2 756 aaPredicted RBP12.2□□□□□ -0.46
THBS3-206ENST00000469769 NYAP2Q9P242 653 aa12.2□□□□□ -0.46
THBS3-206ENST00000469769 BRPF3Q9ULD4 1205 aa12.2□□□□□ -0.46
THBS3-206ENST00000469769 ATAD5Q96QE3 1844 aa12.19□□□□□ -0.46
THBS3-206ENST00000469769 ERICH2A1L162 156 aa12.19□□□□□ -0.46
THBS3-206ENST00000469769 UNCXA6NJT0 531 aa12.19□□□□□ -0.46
THBS3-206ENST00000469769 NMT2O60551 498 aa12.19□□□□□ -0.46
THBS3-206ENST00000469769 PFKFB2O60825 505 aa12.19□□□□□ -0.46
THBS3-206ENST00000469769 USP2O75604 605 aaPredicted RBP12.19□□□□□ -0.46
THBS3-206ENST00000469769 ASNSP08243 561 aa12.19□□□□□ -0.46
THBS3-206ENST00000469769 PDIA3P30101 505 aaKnown RBP12.19□□□□□ -0.46
THBS3-206ENST00000469769 TROAPQ12815 778 aa12.19□□□□□ -0.46
THBS3-206ENST00000469769 BECN1Q14457 450 aa12.19□□□□□ -0.46
THBS3-206ENST00000469769 WTAPQ15007 396 aa12.19□□□□□ -0.46
THBS3-206ENST00000469769 ABCB5Q2M3G0 1257 aa12.19□□□□□ -0.46
THBS3-206ENST00000469769 NOL9Q5SY16 702 aaKnown RBP12.19□□□□□ -0.46
THBS3-206ENST00000469769 PRAMEF18Q5VWM3 479 aa12.19□□□□□ -0.46
THBS3-206ENST00000469769 APOA5Q6Q788 366 aa12.19□□□□□ -0.46
THBS3-206ENST00000469769 USP48Q86UV5 1035 aa12.19□□□□□ -0.46
THBS3-206ENST00000469769 HSCBQ8IWL3 235 aa12.19□□□□□ -0.46
THBS3-206ENST00000469769 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.19□□□□□ -0.46
THBS3-206ENST00000469769 CDCA5Q96FF9 252 aa12.19□□□□□ -0.46
THBS3-206ENST00000469769 ZKSCAN3Q9BRR0 538 aa12.19□□□□□ -0.46
THBS3-206ENST00000469769 GLIS2Q9BZE0 524 aaPredicted RBP12.19□□□□□ -0.46
THBS3-206ENST00000469769 ZBTB21Q9ULJ3 1066 aa12.19□□□□□ -0.46
THBS3-206ENST00000469769 HPS5Q9UPZ3 1129 aa12.19□□□□□ -0.46
THBS3-206ENST00000469769 MYH4Q9Y623 1939 aa12.19□□□□□ -0.46
THBS3-206ENST00000469769 DOCK1Q14185 1865 aa12.19□□□□□ -0.46
THBS3-206ENST00000469769 LARGE1O95461 756 aa12.18□□□□□ -0.46
THBS3-206ENST00000469769 TTLL1O95922 423 aa12.18□□□□□ -0.46
THBS3-206ENST00000469769 ITGBL1O95965 494 aaPredicted RBP12.18□□□□□ -0.46
THBS3-206ENST00000469769 GH2P01242 217 aa12.18□□□□□ -0.46
THBS3-206ENST00000469769 TOP1P11387 765 aaKnown RBP12.18□□□□□ -0.46
THBS3-206ENST00000469769 APOBRQ0VD83 1088 aa12.18□□□□□ -0.46
THBS3-206ENST00000469769 ST3GAL1Q11201 340 aa12.18□□□□□ -0.46
THBS3-206ENST00000469769 PPP2R5BQ15173 497 aa12.18□□□□□ -0.46
THBS3-206ENST00000469769 SHROOM1Q2M3G4 852 aaPredicted RBP12.18□□□□□ -0.46
THBS3-206ENST00000469769 IFIT1BQ5T764 474 aaKnown RBP12.18□□□□□ -0.46
THBS3-206ENST00000469769 INTS4Q96HW7 963 aaKnown RBP12.18□□□□□ -0.46
THBS3-206ENST00000469769 IPO9Q96P70 1041 aaKnown RBP12.18□□□□□ -0.46
THBS3-206ENST00000469769 TMEM47Q9BQJ4 181 aa12.18□□□□□ -0.46
THBS3-206ENST00000469769 CABP5Q9NP86 173 aa12.18□□□□□ -0.46
THBS3-206ENST00000469769 PHIPQ8WWQ0 1821 aa12.18□□□□□ -0.46
THBS3-206ENST00000469769 KIF3CO14782 793 aa12.17□□□□□ -0.46
THBS3-206ENST00000469769 DDAH1O94760 285 aa12.17□□□□□ -0.46
THBS3-206ENST00000469769 SNHG28P0DPA3 235 aa12.17□□□□□ -0.46
THBS3-206ENST00000469769 FGD1P98174 961 aa12.17□□□□□ -0.46
THBS3-206ENST00000469769 SEPT2Q15019 361 aa12.17□□□□□ -0.46
THBS3-206ENST00000469769 MAP1SQ66K74 1059 aaPredicted RBP12.17□□□□□ -0.46
THBS3-206ENST00000469769 DLK2Q6UY11 383 aa12.17□□□□□ -0.46
THBS3-206ENST00000469769 ZNF654Q8IZM8 581 aa12.17□□□□□ -0.46
THBS3-206ENST00000469769 GTF3C6Q969F1 213 aa12.17□□□□□ -0.46
THBS3-206ENST00000469769 FAM217BQ9NTX9 383 aaPredicted RBP12.17□□□□□ -0.46
THBS3-206ENST00000469769 TRPM7Q96QT4 1865 aa12.17□□□□□ -0.46
THBS3-206ENST00000469769 OTOFQ9HC10 1997 aa12.16□□□□□ -0.46
THBS3-206ENST00000469769 KLF18A0A0U1RQI7 1052 aa12.16□□□□□ -0.46
THBS3-206ENST00000469769 CCDC69A6NI79 296 aa12.16□□□□□ -0.46
THBS3-206ENST00000469769 PPP1R12BO60237 982 aaPredicted RBP12.16□□□□□ -0.46
THBS3-206ENST00000469769 GDF11O95390 407 aa12.16□□□□□ -0.46
THBS3-206ENST00000469769 CALM1P0DP23 149 aa12.16□□□□□ -0.46
THBS3-206ENST00000469769 CALM2P0DP24 149 aa12.16□□□□□ -0.46
THBS3-206ENST00000469769 CALM3P0DP25 149 aa12.16□□□□□ -0.46
THBS3-206ENST00000469769 EEF2P13639 858 aaKnown RBP12.16□□□□□ -0.46
THBS3-206ENST00000469769 INPP5BP32019 993 aa12.16□□□□□ -0.46
THBS3-206ENST00000469769 FKBP1BP68106 108 aa12.16□□□□□ -0.46
THBS3-206ENST00000469769 MAP3K9P80192 1104 aa12.16□□□□□ -0.46
THBS3-206ENST00000469769 SCRN1Q12765 414 aa12.16□□□□□ -0.46
THBS3-206ENST00000469769 LDLRAD1Q5T700 205 aa12.16□□□□□ -0.46
THBS3-206ENST00000469769 CHADLQ6NUI6 762 aa12.16□□□□□ -0.46
THBS3-206ENST00000469769 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.16□□□□□ -0.46
THBS3-206ENST00000469769 SCYL3Q8IZE3 742 aa12.16□□□□□ -0.46
THBS3-206ENST00000469769 CHMP4CQ96CF2 233 aa12.16□□□□□ -0.46
THBS3-206ENST00000469769 LARP6Q9BRS8 491 aaKnown RBP12.16□□□□□ -0.46
THBS3-206ENST00000469769 WDR18Q9BV38 432 aa12.16□□□□□ -0.46
THBS3-206ENST00000469769 CLEC11AQ9Y240 323 aa12.16□□□□□ -0.46
THBS3-206ENST00000469769 TMX2Q9Y320 296 aa12.16□□□□□ -0.46
THBS3-206ENST00000469769 SLC12A7Q9Y666 1083 aa12.16□□□□□ -0.46
THBS3-206ENST00000469769 A0A1W2PRG0 241 aa12.15□□□□□ -0.46
THBS3-206ENST00000469769 ZBTB43O43298 467 aa12.15□□□□□ -0.46
THBS3-206ENST00000469769 NF2P35240 595 aa12.15□□□□□ -0.46
THBS3-206ENST00000469769 ICA1Q05084 483 aa12.15□□□□□ -0.46
THBS3-206ENST00000469769 NTRK3Q16288 839 aa12.15□□□□□ -0.46
THBS3-206ENST00000469769 CATIPQ7Z7H3 387 aa12.15□□□□□ -0.46
THBS3-206ENST00000469769 FANCBQ8NB91 859 aa12.15□□□□□ -0.46
THBS3-206ENST00000469769 PNMA1Q8ND90 353 aa12.15□□□□□ -0.46
THBS3-206ENST00000469769 GMCL1P1Q8NEA9 526 aa12.15□□□□□ -0.46
THBS3-206ENST00000469769 WRNIP1Q96S55 665 aa12.15□□□□□ -0.46
THBS3-206ENST00000469769 LLPHQ9BRT6 129 aaKnown RBP12.15□□□□□ -0.46
THBS3-206ENST00000469769 STX8Q9UNK0 236 aa12.15□□□□□ -0.46
THBS3-206ENST00000469769 PALM3A6NDB9 673 aaPredicted RBP12.14□□□□□ -0.47
THBS3-206ENST00000469769 MPHOSPH10O00566 681 aaKnown RBP12.14□□□□□ -0.47
THBS3-206ENST00000469769 CTDNEP1O95476 244 aa12.14□□□□□ -0.47
THBS3-206ENST00000469769 PTPRAP18433 802 aa12.14□□□□□ -0.47
THBS3-206ENST00000469769 SMARCA1P28370 1054 aa12.14□□□□□ -0.47
THBS3-206ENST00000469769 IREB2P48200 963 aaKnown RBP12.14□□□□□ -0.47
THBS3-206ENST00000469769 FUT2Q10981 343 aa12.14□□□□□ -0.47
THBS3-206ENST00000469769 SYNE3Q6ZMZ3 975 aa12.14□□□□□ -0.47
THBS3-206ENST00000469769 NFXL1Q6ZNB6 911 aa12.14□□□□□ -0.47
THBS3-206ENST00000469769 CLEC10AQ8IUN9 316 aa12.14□□□□□ -0.47
THBS3-206ENST00000469769 SMARCC2Q8TAQ2 1214 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms