RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 PPP2R5BQ15173 497 aa16.82■□□□□ 0.28
CBWD3-205ENST00000469687 RC3H1Q5TC82 1133 aaKnown RBP16.82■□□□□ 0.28
CBWD3-205ENST00000469687 E4F1Q66K89 784 aaPredicted RBP16.82■□□□□ 0.28
CBWD3-205ENST00000469687 SRBD1Q8N5C6 995 aaKnown RBP16.82■□□□□ 0.28
CBWD3-205ENST00000469687 MAST2Q6P0Q8 1798 aa16.82■□□□□ 0.28
CBWD3-205ENST00000469687 SERPINC1P01008 464 aa16.82■□□□□ 0.28
CBWD3-205ENST00000469687 GOLGA8FQ08AF8 430 aa16.82■□□□□ 0.28
CBWD3-205ENST00000469687 GOLGA8DPQ0D2H9 430 aa16.82■□□□□ 0.28
CBWD3-205ENST00000469687 NAA30Q147X3 362 aaPredicted RBP16.82■□□□□ 0.28
CBWD3-205ENST00000469687 TPTE2Q6XPS3 522 aa16.82■□□□□ 0.28
CBWD3-205ENST00000469687 TMTC3Q6ZXV5 915 aa16.82■□□□□ 0.28
CBWD3-205ENST00000469687 EPSTI1Q96J88 318 aa16.82■□□□□ 0.28
CBWD3-205ENST00000469687 CRNKL1Q9BZJ0 848 aaKnown RBP16.82■□□□□ 0.28
CBWD3-205ENST00000469687 TAF1LQ8IZX4 1826 aa16.82■□□□□ 0.28
CBWD3-205ENST00000469687 IRS2Q9Y4H2 1338 aa16.82■□□□□ 0.28
CBWD3-205ENST00000469687 TRIM75PA6NK02 468 aa16.81■□□□□ 0.28
CBWD3-205ENST00000469687 SFPQP23246 707 aaKnown RBP eCLIP16.81■□□□□ 0.28
CBWD3-205ENST00000469687 PTPN14Q15678 1187 aa16.81■□□□□ 0.28
CBWD3-205ENST00000469687 CFAP100Q494V2 611 aa16.81■□□□□ 0.28
CBWD3-205ENST00000469687 ZNF579Q8NAF0 562 aaKnown RBP16.81■□□□□ 0.28
CBWD3-205ENST00000469687 ANKRD2Q9GZV1 360 aa16.81■□□□□ 0.28
CBWD3-205ENST00000469687 INTS13Q9NVM9 706 aa16.81■□□□□ 0.28
CBWD3-205ENST00000469687 RBM28Q9NW13 759 aaKnown RBP16.81■□□□□ 0.28
CBWD3-205ENST00000469687 ORC4O43929 436 aa16.81■□□□□ 0.28
CBWD3-205ENST00000469687 USP17L8P0C7I0 530 aa16.81■□□□□ 0.28
CBWD3-205ENST00000469687 XBP1P17861 261 aa16.81■□□□□ 0.28
CBWD3-205ENST00000469687 SARSP49591 514 aaKnown RBP16.81■□□□□ 0.28
CBWD3-205ENST00000469687 TRMT44Q8IYL2 757 aaKnown RBP16.81■□□□□ 0.28
CBWD3-205ENST00000469687 CCDC150Q8NCX0 1101 aa16.81■□□□□ 0.28
CBWD3-205ENST00000469687 CEP131Q9UPN4 1083 aa16.81■□□□□ 0.28
CBWD3-205ENST00000469687 RTCBQ9Y3I0 505 aaKnown RBP16.81■□□□□ 0.28
CBWD3-205ENST00000469687 DDAH1O94760 285 aa16.8■□□□□ 0.28
CBWD3-205ENST00000469687 PCP11498 1178 aaKnown RBP16.8■□□□□ 0.28
CBWD3-205ENST00000469687 CASP1P29466 404 aa16.8■□□□□ 0.28
CBWD3-205ENST00000469687 ZNF174Q15697 407 aa16.8■□□□□ 0.28
CBWD3-205ENST00000469687 GRIK5Q16478 980 aa16.8■□□□□ 0.28
CBWD3-205ENST00000469687 NT5DC1Q5TFE4 455 aa16.8■□□□□ 0.28
CBWD3-205ENST00000469687 MTERF4Q7Z6M4 381 aaKnown RBP16.8■□□□□ 0.28
CBWD3-205ENST00000469687 ELOA2Q8IYF1 753 aaPredicted RBP16.8■□□□□ 0.28
CBWD3-205ENST00000469687 TNFRSF25Q93038 417 aa16.8■□□□□ 0.28
CBWD3-205ENST00000469687 DHX58Q96C10 678 aa16.8■□□□□ 0.28
CBWD3-205ENST00000469687 GPR101Q96P66 508 aaPredicted RBP16.8■□□□□ 0.28
CBWD3-205ENST00000469687 MED15Q96RN5 788 aa16.8■□□□□ 0.28
CBWD3-205ENST00000469687 PAXBP1Q9Y5B6 917 aa16.8■□□□□ 0.28
CBWD3-205ENST00000469687 PDS5AQ29RF7 1337 aaKnown RBP16.8■□□□□ 0.28
CBWD3-205ENST00000469687 RGL2O15211 777 aa16.79■□□□□ 0.28
CBWD3-205ENST00000469687 NCBP1Q09161 790 aaKnown RBP16.79■□□□□ 0.28
CBWD3-205ENST00000469687 CCDC112Q8NEF3 446 aa16.79■□□□□ 0.28
CBWD3-205ENST00000469687 SMARCE1Q969G3 411 aa16.79■□□□□ 0.28
CBWD3-205ENST00000469687 ATP8A2Q9NTI2 1148 aa16.79■□□□□ 0.28
CBWD3-205ENST00000469687 MCM9Q9NXL9 1143 aa16.79■□□□□ 0.28
CBWD3-205ENST00000469687 NPHP1O15259 732 aa16.79■□□□□ 0.28
CBWD3-205ENST00000469687 CALM1P0DP23 149 aa16.79■□□□□ 0.28
CBWD3-205ENST00000469687 CALM2P0DP24 149 aa16.79■□□□□ 0.28
CBWD3-205ENST00000469687 CALM3P0DP25 149 aa16.79■□□□□ 0.28
CBWD3-205ENST00000469687 NFIXQ14938 502 aa16.79■□□□□ 0.28
CBWD3-205ENST00000469687 RCSD1Q6JBY9 416 aa16.79■□□□□ 0.28
CBWD3-205ENST00000469687 DZIP1Q86YF9 867 aaKnown RBP16.79■□□□□ 0.28
CBWD3-205ENST00000469687 UBE2Q2Q8WVN8 375 aa16.79■□□□□ 0.28
CBWD3-205ENST00000469687 ANKRD7Q92527 254 aa16.79■□□□□ 0.28
CBWD3-205ENST00000469687 SYMPKQ92797 1274 aaKnown RBP16.79■□□□□ 0.28
CBWD3-205ENST00000469687 NHSQ6T4R5 1651 aa16.79■□□□□ 0.28
CBWD3-205ENST00000469687 TSPY2A6NKD2 308 aa16.78■□□□□ 0.28
CBWD3-205ENST00000469687 MORC3Q14149 939 aa16.78■□□□□ 0.28
CBWD3-205ENST00000469687 CTCFLQ8NI51 663 aaPredicted RBP16.78■□□□□ 0.28
CBWD3-205ENST00000469687 DYNLL2Q96FJ2 89 aa16.78■□□□□ 0.28
CBWD3-205ENST00000469687 PPP1R13BQ96KQ4 1090 aa16.78■□□□□ 0.28
CBWD3-205ENST00000469687 KCND1Q9NSA2 647 aa16.78■□□□□ 0.28
CBWD3-205ENST00000469687 ARPP21Q9UBL0 812 aaPredicted RBP16.78■□□□□ 0.28
CBWD3-205ENST00000469687 HOOK1Q9UJC3 728 aaKnown RBP16.78■□□□□ 0.28
CBWD3-205ENST00000469687 TOM1O60784 492 aa16.78■□□□□ 0.28
CBWD3-205ENST00000469687 AFMP43652 599 aa16.78■□□□□ 0.28
CBWD3-205ENST00000469687 VSTM4Q8IW00 320 aa16.78■□□□□ 0.28
CBWD3-205ENST00000469687 ANKIB1Q9P2G1 1089 aa16.78■□□□□ 0.28
CBWD3-205ENST00000469687 NFE2L3Q9Y4A8 694 aa16.78■□□□□ 0.28
CBWD3-205ENST00000469687 DIXDC1Q155Q3 683 aa16.77■□□□□ 0.28
CBWD3-205ENST00000469687 SBK1Q52WX2 424 aa16.77■□□□□ 0.28
CBWD3-205ENST00000469687 IL17RBQ9NRM6 502 aa16.77■□□□□ 0.28
CBWD3-205ENST00000469687 TTC38Q5R3I4 469 aa16.77■□□□□ 0.27
CBWD3-205ENST00000469687 SPATA20Q8TB22 786 aa16.77■□□□□ 0.27
CBWD3-205ENST00000469687 SH3RF3Q8TEJ3 882 aaPredicted RBP16.77■□□□□ 0.27
CBWD3-205ENST00000469687 SCG2P13521 617 aa16.76■□□□□ 0.27
CBWD3-205ENST00000469687 PIK3AP1Q6ZUJ8 805 aa16.76■□□□□ 0.27
CBWD3-205ENST00000469687 SAMSN1Q9NSI8 373 aaKnown RBP16.76■□□□□ 0.27
CBWD3-205ENST00000469687 MKRN1Q9UHC7 482 aaKnown RBP16.76■□□□□ 0.27
CBWD3-205ENST00000469687 LY75O60449 1722 aa16.76■□□□□ 0.27
CBWD3-205ENST00000469687 VWA3AA6NCI4 1184 aa16.75■□□□□ 0.27
CBWD3-205ENST00000469687 CBFA2T2O43439 604 aa16.75■□□□□ 0.27
CBWD3-205ENST00000469687 ZNF18P17022 549 aa16.75■□□□□ 0.27
CBWD3-205ENST00000469687 RFC4P35249 363 aa16.75■□□□□ 0.27
CBWD3-205ENST00000469687 TFAP4Q01664 338 aa16.75■□□□□ 0.27
CBWD3-205ENST00000469687 PTGDRQ13258 359 aa16.75■□□□□ 0.27
CBWD3-205ENST00000469687 MLKLQ8NB16 471 aa16.75■□□□□ 0.27
CBWD3-205ENST00000469687 STAMQ92783 540 aa16.75■□□□□ 0.27
CBWD3-205ENST00000469687 BRMS1Q9HCU9 246 aa16.75■□□□□ 0.27
CBWD3-205ENST00000469687 TOP1P11387 765 aaKnown RBP16.75■□□□□ 0.27
CBWD3-205ENST00000469687 CD44P16070 742 aaKnown RBP16.75■□□□□ 0.27
CBWD3-205ENST00000469687 NLRP5P59047 1200 aa16.75■□□□□ 0.27
CBWD3-205ENST00000469687 PFKFB3Q16875 520 aaPredicted RBP16.75■□□□□ 0.27
CBWD3-205ENST00000469687 STAG2Q8N3U4 1231 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms