RNA–Protein interactions for RNA: ENST00000469608.5

CALCA-204, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best)

Gene CALCA, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-204ENST00000469608 GUCY1A2P33402 732 aa17.09■□□□□ 0.33
CALCA-204ENST00000469608 GJA8P48165 433 aa17.09■□□□□ 0.33
CALCA-204ENST00000469608 USP14P54578 494 aa17.09■□□□□ 0.33
CALCA-204ENST00000469608 RRP1P56182 461 aaKnown RBP17.09■□□□□ 0.33
CALCA-204ENST00000469608 UBE3CQ15386 1083 aa17.09■□□□□ 0.33
CALCA-204ENST00000469608 ZSCAN25Q6NSZ9 544 aa17.09■□□□□ 0.33
CALCA-204ENST00000469608 GPRC5AQ8NFJ5 357 aa17.09■□□□□ 0.33
CALCA-204ENST00000469608 NKX2-3Q8TAU0 364 aa17.09■□□□□ 0.33
CALCA-204ENST00000469608 PXYLP1Q8TE99 480 aa17.09■□□□□ 0.33
CALCA-204ENST00000469608 DYNLL2Q96FJ2 89 aa17.09■□□□□ 0.33
CALCA-204ENST00000469608 C12orf42Q96LP6 360 aa17.09■□□□□ 0.33
CALCA-204ENST00000469608 YTHDC1Q96MU7 727 aaKnown RBP17.09■□□□□ 0.33
CALCA-204ENST00000469608 KIAA1683Q9H0B3 1180 aa17.09■□□□□ 0.33
CALCA-204ENST00000469608 ERVK-9P63128 1117 aa17.08■□□□□ 0.32
CALCA-204ENST00000469608 ERVK-24P63145 666 aa17.08■□□□□ 0.32
CALCA-204ENST00000469608 U2AF1L4Q8WU68 220 aaKnown RBP17.08■□□□□ 0.32
CALCA-204ENST00000469608 DDRGK1Q96HY6 314 aa17.08■□□□□ 0.32
CALCA-204ENST00000469608 ATP8A2Q9NTI2 1148 aa17.08■□□□□ 0.32
CALCA-204ENST00000469608 RBPJLQ9UBG7 517 aa17.08■□□□□ 0.32
CALCA-204ENST00000469608 PCDHB15Q9Y5E8 787 aa17.08■□□□□ 0.32
CALCA-204ENST00000469608 SLC4A4Q9Y6R1 1079 aa17.08■□□□□ 0.32
CALCA-204ENST00000469608 USP17L15C9J2P7 530 aa17.07■□□□□ 0.32
CALCA-204ENST00000469608 USP17L13C9JLJ4 530 aa17.07■□□□□ 0.32
CALCA-204ENST00000469608 USP17L11C9JVI0 530 aa17.07■□□□□ 0.32
CALCA-204ENST00000469608 USP17L18D6R9N7 530 aa17.07■□□□□ 0.32
CALCA-204ENST00000469608 USP17L22D6RA61 530 aa17.07■□□□□ 0.32
CALCA-204ENST00000469608 USP17L17D6RBQ6 530 aa17.07■□□□□ 0.32
CALCA-204ENST00000469608 USP17L19D6RCP7 530 aa17.07■□□□□ 0.32
CALCA-204ENST00000469608 USP17L20D6RJB6 530 aa17.07■□□□□ 0.32
CALCA-204ENST00000469608 SMIM22K7EJ46 135 aa17.07■□□□□ 0.32
CALCA-204ENST00000469608 USP17L24Q0WX57 530 aa17.07■□□□□ 0.32
CALCA-204ENST00000469608 CLEC10AQ8IUN9 316 aa17.07■□□□□ 0.32
CALCA-204ENST00000469608 CCAR1Q8IX12 1150 aaKnown RBP17.07■□□□□ 0.32
CALCA-204ENST00000469608 AMOTL1Q8IY63 956 aa17.07■□□□□ 0.32
CALCA-204ENST00000469608 GTF3C2Q8WUA4 911 aaPredicted RBP17.07■□□□□ 0.32
CALCA-204ENST00000469608 PUS7LQ9H0K6 701 aaKnown RBP17.07■□□□□ 0.32
CALCA-204ENST00000469608 PORCNQ9H237 461 aa17.07■□□□□ 0.32
CALCA-204ENST00000469608 RPAP3Q9H6T3 665 aaPredicted RBP17.07■□□□□ 0.32
CALCA-204ENST00000469608 SWAP70Q9UH65 585 aa17.07■□□□□ 0.32
CALCA-204ENST00000469608 USP17L12C9JPN9 530 aa17.06■□□□□ 0.32
CALCA-204ENST00000469608 USP17L21D6R901 530 aa17.06■□□□□ 0.32
CALCA-204ENST00000469608 SLC34A2O95436 690 aa17.06■□□□□ 0.32
CALCA-204ENST00000469608 HMGCRP04035 888 aa17.06■□□□□ 0.32
CALCA-204ENST00000469608 POTEEQ6S8J3 1075 aa17.06■□□□□ 0.32
CALCA-204ENST00000469608 DEFB118Q96PH6 123 aa17.06■□□□□ 0.32
CALCA-204ENST00000469608 CWC22Q9HCG8 908 aaKnown RBP17.06■□□□□ 0.32
CALCA-204ENST00000469608 GJD2Q9UKL4 321 aa17.06■□□□□ 0.32
CALCA-204ENST00000469608 A0A1W2PRG0 241 aa17.05■□□□□ 0.32
CALCA-204ENST00000469608 FARP2O94887 1054 aaPredicted RBP17.05■□□□□ 0.32
CALCA-204ENST00000469608 AKR1B1P15121 316 aa17.05■□□□□ 0.32
CALCA-204ENST00000469608 CYP2B6P20813 491 aa17.05■□□□□ 0.32
CALCA-204ENST00000469608 MAPK4P31152 587 aa17.05■□□□□ 0.32
CALCA-204ENST00000469608 TRIM32Q13049 653 aa17.05■□□□□ 0.32
CALCA-204ENST00000469608 Q3C1V9 767 aa17.05■□□□□ 0.32
CALCA-204ENST00000469608 C12orf60Q5U649 245 aa17.05■□□□□ 0.32
CALCA-204ENST00000469608 WDR78Q5VTH9 848 aa17.05■□□□□ 0.32
CALCA-204ENST00000469608 CATSPERGQ6ZRH7 1159 aa17.05■□□□□ 0.32
CALCA-204ENST00000469608 TMEM179Q6ZVK1 233 aa17.05■□□□□ 0.32
CALCA-204ENST00000469608 KBTBD3Q8NAB2 608 aa17.05■□□□□ 0.32
CALCA-204ENST00000469608 SOCS4Q8WXH5 440 aa17.05■□□□□ 0.32
CALCA-204ENST00000469608 CNMDO75829 334 aa17.04■□□□□ 0.32
CALCA-204ENST00000469608 SGPL1O95470 568 aa17.04■□□□□ 0.32
CALCA-204ENST00000469608 ICA1Q05084 483 aa17.04■□□□□ 0.32
CALCA-204ENST00000469608 GPR142Q7Z601 462 aa17.04■□□□□ 0.32
CALCA-204ENST00000469608 OTUD7AQ8TE49 926 aaPredicted RBP17.04■□□□□ 0.32
CALCA-204ENST00000469608 TRIB2Q92519 343 aa17.04■□□□□ 0.32
CALCA-204ENST00000469608 CRBNQ96SW2 442 aa17.04■□□□□ 0.32
CALCA-204ENST00000469608 NUDT12Q9BQG2 462 aa17.04■□□□□ 0.32
CALCA-204ENST00000469608 TANGO6Q9C0B7 1094 aa17.04■□□□□ 0.32
CALCA-204ENST00000469608 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.04■□□□□ 0.32
CALCA-204ENST00000469608 PAK6Q9NQU5 681 aaPredicted RBP17.04■□□□□ 0.32
CALCA-204ENST00000469608 RABGAP1Q9Y3P9 1069 aa17.04■□□□□ 0.32
CALCA-204ENST00000469608 A0A0G2JMZ2 1700 aa17.04■□□□□ 0.32
CALCA-204ENST00000469608 RLFQ13129 1914 aa17.04■□□□□ 0.32
CALCA-204ENST00000469608 PARP14Q460N5 1801 aa17.03■□□□□ 0.32
CALCA-204ENST00000469608 SPDYE16A6NNV3 312 aaPredicted RBP17.03■□□□□ 0.32
CALCA-204ENST00000469608 TFRCP02786 760 aaKnown RBP17.03■□□□□ 0.32
CALCA-204ENST00000469608 CDK8P49336 464 aa17.03■□□□□ 0.32
CALCA-204ENST00000469608 C16orf86Q6ZW13 317 aa17.03■□□□□ 0.32
CALCA-204ENST00000469608 PLEKHH3Q7Z736 793 aa17.03■□□□□ 0.32
CALCA-204ENST00000469608 GCC1Q96CN9 775 aa17.03■□□□□ 0.32
CALCA-204ENST00000469608 TRIOBPQ9H2D6 2365 aa17.03■□□□□ 0.32
CALCA-204ENST00000469608 RNF113AO15541 343 aaKnown RBP17.02■□□□□ 0.32
CALCA-204ENST00000469608 ZKSCAN1P17029 563 aaPredicted RBP17.02■□□□□ 0.32
CALCA-204ENST00000469608 CCNA1P78396 465 aa17.02■□□□□ 0.32
CALCA-204ENST00000469608 ATP2B2Q01814 1243 aa17.02■□□□□ 0.32
CALCA-204ENST00000469608 CTR9Q6PD62 1173 aa17.02■□□□□ 0.32
CALCA-204ENST00000469608 UBE2Q1Q7Z7E8 422 aa17.02■□□□□ 0.32
CALCA-204ENST00000469608 SPICE1Q8N0Z3 855 aa17.02■□□□□ 0.32
CALCA-204ENST00000469608 STK11IPQ8N1F8 1099 aa17.02■□□□□ 0.32
CALCA-204ENST00000469608 APPBP2Q92624 585 aa17.02■□□□□ 0.32
CALCA-204ENST00000469608 DPF3Q92784 378 aa17.02■□□□□ 0.32
CALCA-204ENST00000469608 OSBP2Q969R2 916 aa17.02■□□□□ 0.32
CALCA-204ENST00000469608 STRBPQ96SI9 672 aaKnown RBP17.02■□□□□ 0.32
CALCA-204ENST00000469608 ARHGEF10LQ9HCE6 1279 aa17.02■□□□□ 0.32
CALCA-204ENST00000469608 BTBD7Q9P203 1132 aa17.02■□□□□ 0.32
CALCA-204ENST00000469608 ARPP21Q9UBL0 812 aaPredicted RBP17.02■□□□□ 0.32
CALCA-204ENST00000469608 H0YGN5 161 aa17.01■□□□□ 0.31
CALCA-204ENST00000469608 PRKAR2AP13861 404 aaKnown RBP17.01■□□□□ 0.31
CALCA-204ENST00000469608 RGS2P41220 211 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms