RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 PKD2L1Q9P0L9 805 aa16.88■□□□□ 0.29
LIMS2-213ENST00000469300 KDM3AQ9Y4C1 1321 aa16.88■□□□□ 0.29
LIMS2-213ENST00000469300 KLRF2D3W0D1 207 aa16.87■□□□□ 0.29
LIMS2-213ENST00000469300 NCAPH2Q6IBW4 605 aa16.87■□□□□ 0.29
LIMS2-213ENST00000469300 COA1Q9GZY4 146 aa16.87■□□□□ 0.29
LIMS2-213ENST00000469300 PNPLA6Q8IY17 1366 aa16.87■□□□□ 0.29
LIMS2-213ENST00000469300 DNM2P50570 870 aa16.87■□□□□ 0.29
LIMS2-213ENST00000469300 HSP90AA4PQ58FG1 418 aa16.87■□□□□ 0.29
LIMS2-213ENST00000469300 MASTLQ96GX5 879 aa16.87■□□□□ 0.29
LIMS2-213ENST00000469300 SEC62Q99442 399 aaKnown RBP16.87■□□□□ 0.29
LIMS2-213ENST00000469300 CAMSAP1Q5T5Y3 1602 aa16.87■□□□□ 0.29
LIMS2-213ENST00000469300 CHMP2AO43633 222 aa16.87■□□□□ 0.29
LIMS2-213ENST00000469300 ADD2P35612 726 aa16.87■□□□□ 0.29
LIMS2-213ENST00000469300 ABCB5Q2M3G0 1257 aa16.87■□□□□ 0.29
LIMS2-213ENST00000469300 SUPT20HL1Q3ZLR7 823 aa16.87■□□□□ 0.29
LIMS2-213ENST00000469300 EAPPQ56P03 285 aaPredicted RBP16.87■□□□□ 0.29
LIMS2-213ENST00000469300 WDR44Q5JSH3 913 aa16.87■□□□□ 0.29
LIMS2-213ENST00000469300 MYSM1Q5VVJ2 828 aa16.87■□□□□ 0.29
LIMS2-213ENST00000469300 CEP135Q66GS9 1140 aa16.87■□□□□ 0.29
LIMS2-213ENST00000469300 BLIDQ8IZY5 108 aa16.87■□□□□ 0.29
LIMS2-213ENST00000469300 POLR2DO15514 142 aaKnown RBP16.87■□□□□ 0.29
LIMS2-213ENST00000469300 MAP3K9P80192 1104 aa16.87■□□□□ 0.29
LIMS2-213ENST00000469300 USH1GQ495M9 461 aa16.87■□□□□ 0.29
LIMS2-213ENST00000469300 HS1BP3Q53T59 392 aa16.87■□□□□ 0.29
LIMS2-213ENST00000469300 FAM182BQ5T319 152 aa16.87■□□□□ 0.29
LIMS2-213ENST00000469300 KIFC2Q96AC6 838 aa16.87■□□□□ 0.29
LIMS2-213ENST00000469300 IWS1Q96ST2 819 aa16.87■□□□□ 0.29
LIMS2-213ENST00000469300 SPATA31A6Q5VVP1 1343 aa16.87■□□□□ 0.29
LIMS2-213ENST00000469300 MADDQ8WXG6 1647 aa16.86■□□□□ 0.29
LIMS2-213ENST00000469300 PRKG1Q13976 671 aa16.86■□□□□ 0.29
LIMS2-213ENST00000469300 ME3Q16798 604 aa16.86■□□□□ 0.29
LIMS2-213ENST00000469300 SUSD4Q5VX71 490 aa16.86■□□□□ 0.29
LIMS2-213ENST00000469300 VPS54Q9P1Q0 977 aa16.86■□□□□ 0.29
LIMS2-213ENST00000469300 TCP10L2B9ZVM9 353 aa16.86■□□□□ 0.29
LIMS2-213ENST00000469300 OTUD7BQ6GQQ9 843 aa16.86■□□□□ 0.29
LIMS2-213ENST00000469300 SRRTQ9BXP5 876 aaKnown RBP16.86■□□□□ 0.29
LIMS2-213ENST00000469300 CCDC169A6NNP5 214 aa16.86■□□□□ 0.29
LIMS2-213ENST00000469300 SCG2P13521 617 aa16.86■□□□□ 0.29
LIMS2-213ENST00000469300 MTX1Q13505 466 aa16.86■□□□□ 0.29
LIMS2-213ENST00000469300 BMS1Q14692 1282 aaKnown RBP16.86■□□□□ 0.29
LIMS2-213ENST00000469300 SLFN13Q68D06 897 aa16.86■□□□□ 0.29
LIMS2-213ENST00000469300 FBXO11Q86XK2 927 aa16.86■□□□□ 0.29
LIMS2-213ENST00000469300 KRT222Q8N1A0 295 aa16.86■□□□□ 0.29
LIMS2-213ENST00000469300 FAM212AQ96EL1 285 aa16.86■□□□□ 0.29
LIMS2-213ENST00000469300 CDHR2Q9BYE9 1310 aa16.86■□□□□ 0.29
LIMS2-213ENST00000469300 MMP10P09238 476 aa16.86■□□□□ 0.29
LIMS2-213ENST00000469300 SPECC1Q5M775 1068 aa16.86■□□□□ 0.29
LIMS2-213ENST00000469300 PSTPIP2Q9H939 334 aa16.86■□□□□ 0.29
LIMS2-213ENST00000469300 IFNKQ9P0W0 207 aa16.86■□□□□ 0.29
LIMS2-213ENST00000469300 PLEKHG2Q9H7P9 1386 aa16.86■□□□□ 0.29
LIMS2-213ENST00000469300 ASPRV1Q53RT3 343 aa16.85■□□□□ 0.29
LIMS2-213ENST00000469300 NOSTRINQ8IVI9 506 aa16.85■□□□□ 0.29
LIMS2-213ENST00000469300 TTLL6Q8N841 843 aa16.85■□□□□ 0.29
LIMS2-213ENST00000469300 JAK2O60674 1132 aa16.85■□□□□ 0.29
LIMS2-213ENST00000469300 ZNF202O95125 648 aa16.85■□□□□ 0.29
LIMS2-213ENST00000469300 CABP7Q86V35 215 aa16.85■□□□□ 0.29
LIMS2-213ENST00000469300 GJD4Q96KN9 370 aaPredicted RBP16.85■□□□□ 0.29
LIMS2-213ENST00000469300 KCNJ14Q9UNX9 436 aa16.85■□□□□ 0.29
LIMS2-213ENST00000469300 INO80Q9ULG1 1556 aaPredicted RBP16.85■□□□□ 0.29
LIMS2-213ENST00000469300 BRD1O95696 1058 aa16.85■□□□□ 0.29
LIMS2-213ENST00000469300 TBC1D8BQ0IIM8 1120 aa16.85■□□□□ 0.29
LIMS2-213ENST00000469300 HERC4Q5GLZ8 1057 aaPredicted RBP16.85■□□□□ 0.29
LIMS2-213ENST00000469300 CHAMP1Q96JM3 812 aa16.85■□□□□ 0.29
LIMS2-213ENST00000469300 SPC25Q9HBM1 224 aa16.85■□□□□ 0.29
LIMS2-213ENST00000469300 ADCY9O60503 1353 aa16.85■□□□□ 0.29
LIMS2-213ENST00000469300 RIMBP3CA6NJZ7 1639 aa16.85■□□□□ 0.29
LIMS2-213ENST00000469300 RIMBP3BA6NNM3 1639 aa16.85■□□□□ 0.29
LIMS2-213ENST00000469300 OTUD6AQ7L8S5 288 aa16.85■□□□□ 0.29
LIMS2-213ENST00000469300 LSG1Q9H089 658 aaKnown RBP16.85■□□□□ 0.29
LIMS2-213ENST00000469300 RIMBP3Q9UFD9 1639 aa16.85■□□□□ 0.29
LIMS2-213ENST00000469300 POLR2MP0CAP2 368 aa16.84■□□□□ 0.29
LIMS2-213ENST00000469300 KRT26Q7Z3Y9 468 aa16.84■□□□□ 0.29
LIMS2-213ENST00000469300 KIFAP3Q92845 792 aa16.84■□□□□ 0.29
LIMS2-213ENST00000469300 NOC4LQ9BVI4 516 aaKnown RBP16.84■□□□□ 0.29
LIMS2-213ENST00000469300 KANSL2Q9H9L4 492 aa16.84■□□□□ 0.29
LIMS2-213ENST00000469300 POLR3GO15318 223 aaPredicted RBP16.84■□□□□ 0.29
LIMS2-213ENST00000469300 DALRD3Q5D0E6 543 aaKnown RBP16.84■□□□□ 0.29
LIMS2-213ENST00000469300 CTR9Q6PD62 1173 aa16.84■□□□□ 0.29
LIMS2-213ENST00000469300 SRP68Q9UHB9 627 aaKnown RBP16.84■□□□□ 0.29
LIMS2-213ENST00000469300 GAS7O60861 476 aa16.84■□□□□ 0.29
LIMS2-213ENST00000469300 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.84■□□□□ 0.29
LIMS2-213ENST00000469300 CCDC94Q9BW85 323 aaPredicted RBP16.84■□□□□ 0.29
LIMS2-213ENST00000469300 SERPINB13Q9UIV8 391 aa16.84■□□□□ 0.29
LIMS2-213ENST00000469300 PTPRUQ92729 1446 aa16.84■□□□□ 0.29
LIMS2-213ENST00000469300 E9PCH4 1651 aa16.84■□□□□ 0.29
LIMS2-213ENST00000469300 USP14P54578 494 aa16.84■□□□□ 0.29
LIMS2-213ENST00000469300 PAK1Q13153 545 aa16.84■□□□□ 0.29
LIMS2-213ENST00000469300 BIRC3Q13489 604 aa16.84■□□□□ 0.29
LIMS2-213ENST00000469300 SLFN12Q8IYM2 578 aa16.84■□□□□ 0.29
LIMS2-213ENST00000469300 CSGALNACT2Q8N6G5 542 aa16.84■□□□□ 0.29
LIMS2-213ENST00000469300 CEP152O94986 1710 aa16.83■□□□□ 0.29
LIMS2-213ENST00000469300 TRIM28Q13263 835 aaKnown RBP16.83■□□□□ 0.29
LIMS2-213ENST00000469300 RRAGDQ9NQL2 400 aaPredicted RBP16.83■□□□□ 0.29
LIMS2-213ENST00000469300 RASAL2Q9UJF2 1139 aa16.83■□□□□ 0.29
LIMS2-213ENST00000469300 hCG_1984214I3L0E3 225 aa16.83■□□□□ 0.28
LIMS2-213ENST00000469300 DCAF17Q5H9S7 520 aaPredicted RBP16.83■□□□□ 0.28
LIMS2-213ENST00000469300 ADALQ6DHV7 355 aa16.83■□□□□ 0.28
LIMS2-213ENST00000469300 ZNF713Q8N859 430 aaPredicted RBP16.83■□□□□ 0.28
LIMS2-213ENST00000469300 CERKQ8TCT0 537 aa16.83■□□□□ 0.28
LIMS2-213ENST00000469300 NUP58Q9BVL2 599 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms