RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 LHX8Q68G74 356 aa14.94□□□□□ -0.02
HDAC3-204ENST00000469207 PLEKHH3Q7Z736 793 aa14.94□□□□□ -0.02
HDAC3-204ENST00000469207 FEZ1Q99689 392 aa14.94□□□□□ -0.02
HDAC3-204ENST00000469207 GDF15Q99988 308 aa14.94□□□□□ -0.02
HDAC3-204ENST00000469207 RIOK1Q9BRS2 568 aaKnown RBP14.94□□□□□ -0.02
HDAC3-204ENST00000469207 FLRT1Q9NZU1 646 aa14.94□□□□□ -0.02
HDAC3-204ENST00000469207 BTBD7Q9P203 1132 aa14.94□□□□□ -0.02
HDAC3-204ENST00000469207 PFASO15067 1338 aa14.93□□□□□ -0.02
HDAC3-204ENST00000469207 USP17L15C9J2P7 530 aa14.93□□□□□ -0.02
HDAC3-204ENST00000469207 USP17L13C9JLJ4 530 aa14.93□□□□□ -0.02
HDAC3-204ENST00000469207 USP17L11C9JVI0 530 aa14.93□□□□□ -0.02
HDAC3-204ENST00000469207 USP17L18D6R9N7 530 aa14.93□□□□□ -0.02
HDAC3-204ENST00000469207 USP17L22D6RA61 530 aa14.93□□□□□ -0.02
HDAC3-204ENST00000469207 USP17L17D6RBQ6 530 aa14.93□□□□□ -0.02
HDAC3-204ENST00000469207 USP17L19D6RCP7 530 aa14.93□□□□□ -0.02
HDAC3-204ENST00000469207 USP17L20D6RJB6 530 aa14.93□□□□□ -0.02
HDAC3-204ENST00000469207 ZKSCAN1P17029 563 aaPredicted RBP14.93□□□□□ -0.02
HDAC3-204ENST00000469207 CAPN2P17655 700 aa14.93□□□□□ -0.02
HDAC3-204ENST00000469207 USP17L24Q0WX57 530 aa14.93□□□□□ -0.02
HDAC3-204ENST00000469207 MAP3K12Q12852 859 aa14.93□□□□□ -0.02
HDAC3-204ENST00000469207 PDE3AQ14432 1141 aa14.93□□□□□ -0.02
HDAC3-204ENST00000469207 WDR78Q5VTH9 848 aa14.93□□□□□ -0.02
HDAC3-204ENST00000469207 CATSPERGQ6ZRH7 1159 aa14.93□□□□□ -0.02
HDAC3-204ENST00000469207 EDC3Q96F86 508 aaKnown RBP14.93□□□□□ -0.02
HDAC3-204ENST00000469207 C12orf42Q96LP6 360 aa14.93□□□□□ -0.02
HDAC3-204ENST00000469207 SMIM22K7EJ46 135 aa14.92□□□□□ -0.02
HDAC3-204ENST00000469207 POLR3DP05423 398 aaPredicted RBP14.92□□□□□ -0.02
HDAC3-204ENST00000469207 CYP2D6P10635 497 aa14.92□□□□□ -0.02
HDAC3-204ENST00000469207 VCAM1P19320 739 aa14.92□□□□□ -0.02
HDAC3-204ENST00000469207 RGS2P41220 211 aa14.92□□□□□ -0.02
HDAC3-204ENST00000469207 SEPT2Q15019 361 aa14.92□□□□□ -0.02
HDAC3-204ENST00000469207 TTC6Q86TZ1 520 aa14.92□□□□□ -0.02
HDAC3-204ENST00000469207 RHPN1Q8TCX5 695 aa14.92□□□□□ -0.02
HDAC3-204ENST00000469207 SOCS4Q8WXH5 440 aa14.92□□□□□ -0.02
HDAC3-204ENST00000469207 EHD4Q9H223 541 aa14.92□□□□□ -0.02
HDAC3-204ENST00000469207 RABGAP1Q9Y3P9 1069 aa14.92□□□□□ -0.02
HDAC3-204ENST00000469207 DDX60LQ5H9U9 1706 aaKnown RBP14.92□□□□□ -0.02
HDAC3-204ENST00000469207 MAGEB6P1A0A0J9YX57 407 aa14.91□□□□□ -0.02
HDAC3-204ENST00000469207 A0A1W2PRG0 241 aa14.91□□□□□ -0.02
HDAC3-204ENST00000469207 CHGBP05060 677 aa14.91□□□□□ -0.02
HDAC3-204ENST00000469207 MAGEA10P43363 369 aaPredicted RBP14.91□□□□□ -0.02
HDAC3-204ENST00000469207 MAP2K5Q13163 448 aa14.91□□□□□ -0.02
HDAC3-204ENST00000469207 KIAA1755Q5JYT7 1200 aa14.91□□□□□ -0.02
HDAC3-204ENST00000469207 SLC9C2Q5TAH2 1124 aa14.91□□□□□ -0.02
HDAC3-204ENST00000469207 SLC44A5Q8NCS7 719 aa14.91□□□□□ -0.02
HDAC3-204ENST00000469207 NPLOC4Q8TAT6 608 aa14.91□□□□□ -0.02
HDAC3-204ENST00000469207 SDR42E1Q8WUS8 393 aa14.91□□□□□ -0.02
HDAC3-204ENST00000469207 KIAA1683Q9H0B3 1180 aa14.91□□□□□ -0.02
HDAC3-204ENST00000469207 RPAP3Q9H6T3 665 aaPredicted RBP14.91□□□□□ -0.02
HDAC3-204ENST00000469207 CWC22Q9HCG8 908 aaKnown RBP14.91□□□□□ -0.02
HDAC3-204ENST00000469207 CABP5Q9NP86 173 aa14.91□□□□□ -0.02
HDAC3-204ENST00000469207 ZNF532Q9HCE3 1301 aa14.91□□□□□ -0.02
HDAC3-204ENST00000469207 GOLIM4O00461 696 aa14.9□□□□□ -0.02
HDAC3-204ENST00000469207 MPHOSPH10O00566 681 aaKnown RBP14.9□□□□□ -0.02
HDAC3-204ENST00000469207 IGSF3O75054 1194 aa14.9□□□□□ -0.02
HDAC3-204ENST00000469207 COL6A1P12109 1028 aa14.9□□□□□ -0.02
HDAC3-204ENST00000469207 PDE6AP16499 860 aa14.9□□□□□ -0.02
HDAC3-204ENST00000469207 PTPREP23469 700 aa14.9□□□□□ -0.02
HDAC3-204ENST00000469207 BMP8BP34820 402 aa14.9□□□□□ -0.02
HDAC3-204ENST00000469207 GABPAQ06546 454 aa14.9□□□□□ -0.02
HDAC3-204ENST00000469207 LRRC26Q2I0M4 334 aa14.9□□□□□ -0.02
HDAC3-204ENST00000469207 SIRT2Q8IXJ6 389 aa14.9□□□□□ -0.02
HDAC3-204ENST00000469207 DYNLL2Q96FJ2 89 aa14.9□□□□□ -0.02
HDAC3-204ENST00000469207 DNAJC2Q99543 621 aaKnown RBP14.9□□□□□ -0.02
HDAC3-204ENST00000469207 MCM9Q9NXL9 1143 aa14.9□□□□□ -0.02
HDAC3-204ENST00000469207 A0A1W2PPC1 479 aa14.89□□□□□ -0.03
HDAC3-204ENST00000469207 TCRBV5S4A2TA0A5A2 114 aa14.89□□□□□ -0.03
HDAC3-204ENST00000469207 SPDYE16A6NNV3 312 aaPredicted RBP14.89□□□□□ -0.03
HDAC3-204ENST00000469207 PRKAB2O43741 272 aa14.89□□□□□ -0.03
HDAC3-204ENST00000469207 CYP2C19P33261 490 aa14.89□□□□□ -0.03
HDAC3-204ENST00000469207 USP14P54578 494 aa14.89□□□□□ -0.03
HDAC3-204ENST00000469207 Q7L0L9 218 aa14.89□□□□□ -0.03
HDAC3-204ENST00000469207 ERC1Q8IUD2 1116 aa14.89□□□□□ -0.03
HDAC3-204ENST00000469207 CLEC10AQ8IUN9 316 aa14.89□□□□□ -0.03
HDAC3-204ENST00000469207 LCORLQ8N3X6 602 aa14.89□□□□□ -0.03
HDAC3-204ENST00000469207 GTF3C2Q8WUA4 911 aaPredicted RBP14.89□□□□□ -0.03
HDAC3-204ENST00000469207 APBA2Q99767 749 aa14.89□□□□□ -0.03
HDAC3-204ENST00000469207 ARMT1Q9H993 441 aa14.89□□□□□ -0.03
HDAC3-204ENST00000469207 COL6A3P12111 3177 aa14.88□□□□□ -0.03
HDAC3-204ENST00000469207 CNGA1P29973 690 aa14.88□□□□□ -0.03
HDAC3-204ENST00000469207 MDM2Q00987 491 aaPredicted RBP14.88□□□□□ -0.03
HDAC3-204ENST00000469207 CERS3Q8IU89 383 aa14.88□□□□□ -0.03
HDAC3-204ENST00000469207 SIAH1Q8IUQ4 282 aa14.88□□□□□ -0.03
HDAC3-204ENST00000469207 TRMT44Q8IYL2 757 aaKnown RBP14.88□□□□□ -0.03
HDAC3-204ENST00000469207 TRPV1Q8NER1 839 aa14.88□□□□□ -0.03
HDAC3-204ENST00000469207 SENP6Q9GZR1 1112 aaPredicted RBP14.88□□□□□ -0.03
HDAC3-204ENST00000469207 DCP1AQ9NPI6 582 aaPredicted RBP14.88□□□□□ -0.03
HDAC3-204ENST00000469207 CYP2D7A0A087X1C5 515 aa14.87□□□□□ -0.03
HDAC3-204ENST00000469207 SLC15A5A6NIM6 579 aa14.87□□□□□ -0.03
HDAC3-204ENST00000469207 CCNA1P78396 465 aa14.87□□□□□ -0.03
HDAC3-204ENST00000469207 ATP2B2Q01814 1243 aa14.87□□□□□ -0.03
HDAC3-204ENST00000469207 ANO1Q5XXA6 986 aa14.87□□□□□ -0.03
HDAC3-204ENST00000469207 SLC17A8Q8NDX2 589 aa14.87□□□□□ -0.03
HDAC3-204ENST00000469207 MOV10L1Q9BXT6 1211 aaKnown RBP14.87□□□□□ -0.03
HDAC3-204ENST00000469207 CRNKL1Q9BZJ0 848 aaKnown RBP14.87□□□□□ -0.03
HDAC3-204ENST00000469207 BOLA2Q9H3K6 86 aa14.87□□□□□ -0.03
HDAC3-204ENST00000469207 COG6Q9Y2V7 657 aa14.87□□□□□ -0.03
HDAC3-204ENST00000469207 IFIT2P09913 472 aaKnown RBP14.86□□□□□ -0.03
HDAC3-204ENST00000469207 ATN1P54259 1190 aaPredicted RBP14.86□□□□□ -0.03
HDAC3-204ENST00000469207 GRB14Q14449 540 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms