RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 MLKLQ8NB16 471 aa16.24■□□□□ 0.19
SMARCD3-205ENST00000469154 INCENPQ9NQS7 918 aa16.24■□□□□ 0.19
SMARCD3-205ENST00000469154 MAN1B1Q9UKM7 699 aa16.24■□□□□ 0.19
SMARCD3-205ENST00000469154 CEP131Q9UPN4 1083 aa16.24■□□□□ 0.19
SMARCD3-205ENST00000469154 ERICH2A1L162 156 aa16.24■□□□□ 0.19
SMARCD3-205ENST00000469154 BTBD18B2RXH4 712 aa16.24■□□□□ 0.19
SMARCD3-205ENST00000469154 RASGRF1Q13972 1273 aa16.24■□□□□ 0.19
SMARCD3-205ENST00000469154 NT5DC1Q5TFE4 455 aa16.24■□□□□ 0.19
SMARCD3-205ENST00000469154 TMTC2Q8N394 836 aa16.24■□□□□ 0.19
SMARCD3-205ENST00000469154 DNAI1Q9UI46 699 aa16.24■□□□□ 0.19
SMARCD3-205ENST00000469154 GOLGA6L9A6NEM1 432 aa16.23■□□□□ 0.19
SMARCD3-205ENST00000469154 TMEM232C9JQI7 657 aa16.23■□□□□ 0.19
SMARCD3-205ENST00000469154 TDO2P48775 406 aa16.23■□□□□ 0.19
SMARCD3-205ENST00000469154 TOB1P50616 345 aaPredicted RBP16.23■□□□□ 0.19
SMARCD3-205ENST00000469154 PDE4BQ07343 736 aa16.23■□□□□ 0.19
SMARCD3-205ENST00000469154 KANK3Q6NY19 840 aa16.23■□□□□ 0.19
SMARCD3-205ENST00000469154 HELBQ8NG08 1087 aaPredicted RBP16.23■□□□□ 0.19
SMARCD3-205ENST00000469154 TACC3Q9Y6A5 838 aa16.23■□□□□ 0.19
SMARCD3-205ENST00000469154 PARP3Q9Y6F1 533 aa16.23■□□□□ 0.19
SMARCD3-205ENST00000469154 UBE2Q2LH0YL09 131 aa16.23■□□□□ 0.19
SMARCD3-205ENST00000469154 TBX2Q13207 712 aaPredicted RBP16.23■□□□□ 0.19
SMARCD3-205ENST00000469154 ERCC6LQ2NKX8 1250 aa16.23■□□□□ 0.19
SMARCD3-205ENST00000469154 TRIM65Q6PJ69 517 aa16.23■□□□□ 0.19
SMARCD3-205ENST00000469154 REXO1L1PQ8IX06 675 aa16.23■□□□□ 0.19
SMARCD3-205ENST00000469154 SMARCE1Q969G3 411 aa16.23■□□□□ 0.19
SMARCD3-205ENST00000469154 RNF41Q9H4P4 317 aaPredicted RBP16.23■□□□□ 0.19
SMARCD3-205ENST00000469154 MYH2Q9UKX2 1941 aa16.22■□□□□ 0.19
SMARCD3-205ENST00000469154 RTL9Q8NET4 1388 aa16.22■□□□□ 0.19
SMARCD3-205ENST00000469154 BMP6P22004 513 aa16.22■□□□□ 0.19
SMARCD3-205ENST00000469154 GUCY1A2P33402 732 aa16.22■□□□□ 0.19
SMARCD3-205ENST00000469154 ENOX1Q8TC92 643 aaKnown RBP16.22■□□□□ 0.19
SMARCD3-205ENST00000469154 MPHOSPH8Q99549 860 aa16.22■□□□□ 0.19
SMARCD3-205ENST00000469154 INTS13Q9NVM9 706 aa16.22■□□□□ 0.19
SMARCD3-205ENST00000469154 KCNJ14Q9UNX9 436 aa16.22■□□□□ 0.19
SMARCD3-205ENST00000469154 SLC4A4Q9Y6R1 1079 aa16.22■□□□□ 0.19
SMARCD3-205ENST00000469154 FOXN1O15353 648 aa16.21■□□□□ 0.19
SMARCD3-205ENST00000469154 MORC3Q14149 939 aa16.21■□□□□ 0.19
SMARCD3-205ENST00000469154 RRP12Q5JTH9 1297 aaKnown RBP16.21■□□□□ 0.19
SMARCD3-205ENST00000469154 TMEM139Q8IV31 216 aa16.21■□□□□ 0.19
SMARCD3-205ENST00000469154 CRACR2BQ8N4Y2 399 aaPredicted RBP16.21■□□□□ 0.19
SMARCD3-205ENST00000469154 SERTAD1Q9UHV2 236 aa16.21■□□□□ 0.19
SMARCD3-205ENST00000469154 ZNF18P17022 549 aa16.21■□□□□ 0.19
SMARCD3-205ENST00000469154 IGHMBP2P38935 993 aaKnown RBP16.21■□□□□ 0.19
SMARCD3-205ENST00000469154 SARSP49591 514 aaKnown RBP16.21■□□□□ 0.19
SMARCD3-205ENST00000469154 BMS1Q14692 1282 aaKnown RBP16.21■□□□□ 0.19
SMARCD3-205ENST00000469154 LCORLQ8N3X6 602 aa16.21■□□□□ 0.19
SMARCD3-205ENST00000469154 CDC5LQ99459 802 aaKnown RBP16.21■□□□□ 0.19
SMARCD3-205ENST00000469154 TOMM22Q9NS69 142 aa16.21■□□□□ 0.19
SMARCD3-205ENST00000469154 SRPRBQ9Y5M8 271 aaKnown RBP16.21■□□□□ 0.19
SMARCD3-205ENST00000469154 POLR2DO15514 142 aaKnown RBP16.2■□□□□ 0.18
SMARCD3-205ENST00000469154 SPECC1Q5M775 1068 aa16.2■□□□□ 0.18
SMARCD3-205ENST00000469154 ZNF771Q7L3S4 317 aaPredicted RBP16.2■□□□□ 0.18
SMARCD3-205ENST00000469154 MNS1Q8NEH6 495 aa16.2■□□□□ 0.18
SMARCD3-205ENST00000469154 CELF1Q92879 486 aaKnown RBP16.2■□□□□ 0.18
SMARCD3-205ENST00000469154 CCDC34Q96HJ3 373 aa16.2■□□□□ 0.18
SMARCD3-205ENST00000469154 PPP2R2CQ9Y2T4 447 aa16.2■□□□□ 0.18
SMARCD3-205ENST00000469154 NFE2L3Q9Y4A8 694 aa16.2■□□□□ 0.18
SMARCD3-205ENST00000469154 DLEC1Q9Y238 1755 aa16.2■□□□□ 0.18
SMARCD3-205ENST00000469154 PRKAB2O43741 272 aa16.2■□□□□ 0.18
SMARCD3-205ENST00000469154 STX10O60499 249 aa16.2■□□□□ 0.18
SMARCD3-205ENST00000469154 PRR29P0C7W0 189 aa16.2■□□□□ 0.18
SMARCD3-205ENST00000469154 CDK11BP21127 795 aaKnown RBP16.2■□□□□ 0.18
SMARCD3-205ENST00000469154 PPP2R5BQ15173 497 aa16.2■□□□□ 0.18
SMARCD3-205ENST00000469154 SPECC1LQ69YQ0 1117 aa16.2■□□□□ 0.18
SMARCD3-205ENST00000469154 ZNF654Q8IZM8 581 aa16.2■□□□□ 0.18
SMARCD3-205ENST00000469154 LRRN4CLQ8ND94 238 aa16.2■□□□□ 0.18
SMARCD3-205ENST00000469154 BAG1Q99933 345 aaPredicted RBP16.2■□□□□ 0.18
SMARCD3-205ENST00000469154 ARGLU1Q9NWB6 273 aaPredicted RBP16.2■□□□□ 0.18
SMARCD3-205ENST00000469154 TNRC6CQ9HCJ0 1690 aaKnown RBP16.2■□□□□ 0.18
SMARCD3-205ENST00000469154 TPM1P09493 284 aa16.19■□□□□ 0.18
SMARCD3-205ENST00000469154 ARHGAP29Q52LW3 1261 aa16.19■□□□□ 0.18
SMARCD3-205ENST00000469154 CT47A1Q5JQC4 288 aaPredicted RBP16.19■□□□□ 0.18
SMARCD3-205ENST00000469154 ANKRD18AQ8IVF6 992 aa16.19■□□□□ 0.18
SMARCD3-205ENST00000469154 UBXN4Q92575 508 aa16.19■□□□□ 0.18
SMARCD3-205ENST00000469154 ZNF446Q9NWS9 450 aa16.19■□□□□ 0.18
SMARCD3-205ENST00000469154 COL4A1P02462 1669 aa16.19■□□□□ 0.18
SMARCD3-205ENST00000469154 ACTN4O43707 911 aaKnown RBP16.19■□□□□ 0.18
SMARCD3-205ENST00000469154 PLCD1P51178 756 aa16.19■□□□□ 0.18
SMARCD3-205ENST00000469154 FAM193AP78312 1265 aa16.19■□□□□ 0.18
SMARCD3-205ENST00000469154 GRIN1Q05586 938 aa16.19■□□□□ 0.18
SMARCD3-205ENST00000469154 FMR1Q06787 632 aaKnown RBP eCLIP16.19■□□□□ 0.18
SMARCD3-205ENST00000469154 GOLGA8FQ08AF8 430 aa16.19■□□□□ 0.18
SMARCD3-205ENST00000469154 GOLGA8DPQ0D2H9 430 aa16.19■□□□□ 0.18
SMARCD3-205ENST00000469154 FANCBQ8NB91 859 aa16.19■□□□□ 0.18
SMARCD3-205ENST00000469154 ZKSCAN3Q9BRR0 538 aa16.19■□□□□ 0.18
SMARCD3-205ENST00000469154 UBAC1Q9BSL1 405 aa16.19■□□□□ 0.18
SMARCD3-205ENST00000469154 PCDHB6Q9Y5E3 794 aa16.19■□□□□ 0.18
SMARCD3-205ENST00000469154 QSER1Q2KHR3 1735 aa16.19■□□□□ 0.18
SMARCD3-205ENST00000469154 VWA3AA6NCI4 1184 aa16.18■□□□□ 0.18
SMARCD3-205ENST00000469154 URI1O94763 535 aaPredicted RBP16.18■□□□□ 0.18
SMARCD3-205ENST00000469154 ERCC5P28715 1186 aaPredicted RBP16.18■□□□□ 0.18
SMARCD3-205ENST00000469154 R3HDM1Q15032 1099 aaKnown RBP16.18■□□□□ 0.18
SMARCD3-205ENST00000469154 ILDR2Q71H61 639 aa16.18■□□□□ 0.18
SMARCD3-205ENST00000469154 RNF26Q9BY78 433 aaPredicted RBP16.18■□□□□ 0.18
SMARCD3-205ENST00000469154 TAF1P21675 1872 aa16.18■□□□□ 0.18
SMARCD3-205ENST00000469154 A0A1B0GUL6 1792 aa16.18■□□□□ 0.18
SMARCD3-205ENST00000469154 TADA3O75528 432 aa16.18■□□□□ 0.18
SMARCD3-205ENST00000469154 SLFN14P0C7P3 912 aa16.18■□□□□ 0.18
SMARCD3-205ENST00000469154 XBP1P17861 261 aa16.18■□□□□ 0.18
SMARCD3-205ENST00000469154 CLCN6P51797 869 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms