RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 USP26Q9BXU7 913 aa4.61□□□□□ -1.67
CDHR3-206ENST00000468477 FAM126AQ9BYI3 521 aaPredicted RBP4.61□□□□□ -1.67
CDHR3-206ENST00000468477 CHRDQ9H2X0 955 aa4.61□□□□□ -1.67
CDHR3-206ENST00000468477 SOX17Q9H6I2 414 aaPredicted RBP4.61□□□□□ -1.67
CDHR3-206ENST00000468477 ZFYVE28Q9HCC9 887 aa4.61□□□□□ -1.67
CDHR3-206ENST00000468477 FOXD3Q9UJU5 478 aaPredicted RBP4.61□□□□□ -1.67
CDHR3-206ENST00000468477 SOX13Q9UN79 622 aa4.61□□□□□ -1.67
CDHR3-206ENST00000468477 MRPS23Q9Y3D9 190 aaKnown RBP4.61□□□□□ -1.67
CDHR3-206ENST00000468477 CTDP1Q9Y5B0 961 aaPredicted RBP4.61□□□□□ -1.67
CDHR3-206ENST00000468477 MEGF11A6BM72 1044 aa4.6□□□□□ -1.67
CDHR3-206ENST00000468477 NFKBIEO00221 500 aa4.6□□□□□ -1.67
CDHR3-206ENST00000468477 DDX3YO15523 660 aaKnown RBP4.6□□□□□ -1.67
CDHR3-206ENST00000468477 DHX16O60231 1041 aaKnown RBP4.6□□□□□ -1.67
CDHR3-206ENST00000468477 MYL3P08590 195 aa4.6□□□□□ -1.67
CDHR3-206ENST00000468477 BMP3P12645 472 aa4.6□□□□□ -1.67
CDHR3-206ENST00000468477 EIF4BP23588 611 aaKnown RBP4.6□□□□□ -1.67
CDHR3-206ENST00000468477 RXRBP28702 533 aa4.6□□□□□ -1.67
CDHR3-206ENST00000468477 TERF1P54274 439 aa4.6□□□□□ -1.67
CDHR3-206ENST00000468477 GSTM4Q03013 218 aa4.6□□□□□ -1.67
CDHR3-206ENST00000468477 NFIAQ12857 509 aa4.6□□□□□ -1.67
CDHR3-206ENST00000468477 IFRD2Q12894 506 aaPredicted RBP4.6□□□□□ -1.67
CDHR3-206ENST00000468477 SQSTM1Q13501 440 aa4.6□□□□□ -1.67
CDHR3-206ENST00000468477 CC2D1AQ6P1N0 951 aaPredicted RBP4.6□□□□□ -1.67
CDHR3-206ENST00000468477 KIAA1211Q6ZU35 1233 aa4.6□□□□□ -1.67
CDHR3-206ENST00000468477 HDGFL2Q7Z4V5 671 aaPredicted RBP4.6□□□□□ -1.67
CDHR3-206ENST00000468477 DDX42Q86XP3 938 aaKnown RBP eCLIP4.6□□□□□ -1.67
CDHR3-206ENST00000468477 C12orf50Q8NA57 414 aaPredicted RBP4.6□□□□□ -1.67
CDHR3-206ENST00000468477 TTC8Q8TAM2 541 aa4.6□□□□□ -1.67
CDHR3-206ENST00000468477 UBASH3BQ8TF42 649 aa4.6□□□□□ -1.67
CDHR3-206ENST00000468477 ALKBH8Q96BT7 664 aaKnown RBP4.6□□□□□ -1.67
CDHR3-206ENST00000468477 FAM46AQ96IP4 442 aaKnown RBP4.6□□□□□ -1.67
CDHR3-206ENST00000468477 DBNDD2Q9BQY9 259 aa4.6□□□□□ -1.67
CDHR3-206ENST00000468477 BHLHE41Q9C0J9 482 aaPredicted RBP4.6□□□□□ -1.67
CDHR3-206ENST00000468477 TMEM260Q9NX78 707 aa4.6□□□□□ -1.67
CDHR3-206ENST00000468477 KCNK4Q9NYG8 393 aa4.6□□□□□ -1.67
CDHR3-206ENST00000468477 SPG7Q9UQ90 795 aa4.6□□□□□ -1.67
CDHR3-206ENST00000468477 LEMD3Q9Y2U8 911 aa4.6□□□□□ -1.67
CDHR3-206ENST00000468477 ALG1L2C9J202 215 aa4.59□□□□□ -1.67
CDHR3-206ENST00000468477 SLC26A4O43511 780 aa4.59□□□□□ -1.67
CDHR3-206ENST00000468477 ADAM11O75078 769 aa4.59□□□□□ -1.67
CDHR3-206ENST00000468477 TRPA1O75762 1119 aa4.59□□□□□ -1.67
CDHR3-206ENST00000468477 CYP11A1P05108 521 aa4.59□□□□□ -1.67
CDHR3-206ENST00000468477 ACPPP15309 386 aa4.59□□□□□ -1.67
CDHR3-206ENST00000468477 SSTR4P31391 388 aa4.59□□□□□ -1.67
CDHR3-206ENST00000468477 USP11P51784 963 aa4.59□□□□□ -1.67
CDHR3-206ENST00000468477 C21orf62-AS1Q17RA5 79 aa4.59□□□□□ -1.67
CDHR3-206ENST00000468477 EXOSC6Q5RKV6 272 aaKnown RBP4.59□□□□□ -1.67
CDHR3-206ENST00000468477 ACBD5Q5T8D3 534 aaPredicted RBP4.59□□□□□ -1.67
CDHR3-206ENST00000468477 RNF43Q68DV7 783 aa4.59□□□□□ -1.67
CDHR3-206ENST00000468477 CCDC70Q6NSX1 233 aa4.59□□□□□ -1.67
CDHR3-206ENST00000468477 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.59□□□□□ -1.67
CDHR3-206ENST00000468477 BEND4Q6ZU67 534 aa4.59□□□□□ -1.67
CDHR3-206ENST00000468477 ARMCX6Q7L4S7 300 aa4.59□□□□□ -1.67
CDHR3-206ENST00000468477 ARMC10Q8N2F6 343 aa4.59□□□□□ -1.67
CDHR3-206ENST00000468477 TTC30BQ8N4P2 665 aa4.59□□□□□ -1.67
CDHR3-206ENST00000468477 NGDNQ8NEJ9 315 aaKnown RBP4.59□□□□□ -1.67
CDHR3-206ENST00000468477 IPO4Q8TEX9 1081 aaKnown RBP4.59□□□□□ -1.67
CDHR3-206ENST00000468477 FAM83CQ9BQN1 747 aa4.59□□□□□ -1.67
CDHR3-206ENST00000468477 C7orf69Q9H7B7 122 aa4.59□□□□□ -1.67
CDHR3-206ENST00000468477 LIN7BQ9HAP6 207 aa4.59□□□□□ -1.67
CDHR3-206ENST00000468477 PTPRHQ9HD43 1115 aa4.59□□□□□ -1.67
CDHR3-206ENST00000468477 COPRSQ9NQ92 184 aa4.59□□□□□ -1.67
CDHR3-206ENST00000468477 PPP4R2Q9NY27 417 aa4.59□□□□□ -1.67
CDHR3-206ENST00000468477 TAGLN3Q9UI15 199 aa4.59□□□□□ -1.67
CDHR3-206ENST00000468477 WASHC2CQ9Y4E1 1318 aa4.59□□□□□ -1.67
CDHR3-206ENST00000468477 USP31Q70CQ4 1352 aa4.58□□□□□ -1.68
CDHR3-206ENST00000468477 SOX1O00570 391 aaPredicted RBP4.58□□□□□ -1.68
CDHR3-206ENST00000468477 CPNE3O75131 537 aaKnown RBP4.58□□□□□ -1.68
CDHR3-206ENST00000468477 RASGRP1O95267 797 aa4.58□□□□□ -1.68
CDHR3-206ENST00000468477 IFIT2P09913 472 aaKnown RBP4.58□□□□□ -1.68
CDHR3-206ENST00000468477 POU3F3P20264 500 aaPredicted RBP4.58□□□□□ -1.68
CDHR3-206ENST00000468477 PPM1FP49593 454 aaPredicted RBP4.58□□□□□ -1.68
CDHR3-206ENST00000468477 RAB27AP51159 221 aa4.58□□□□□ -1.68
CDHR3-206ENST00000468477 MCL1Q07820 350 aa4.58□□□□□ -1.68
CDHR3-206ENST00000468477 MORC3Q14149 939 aa4.58□□□□□ -1.68
CDHR3-206ENST00000468477 SIM2Q14190 667 aaPredicted RBP4.58□□□□□ -1.68
CDHR3-206ENST00000468477 SLC4A8Q2Y0W8 1093 aa4.58□□□□□ -1.68
CDHR3-206ENST00000468477 PAOXQ6QHF9 649 aa4.58□□□□□ -1.68
CDHR3-206ENST00000468477 CASC1Q6TDU7 716 aa4.58□□□□□ -1.68
CDHR3-206ENST00000468477 KRTAP1-3Q8IUG1 177 aa4.58□□□□□ -1.68
CDHR3-206ENST00000468477 TRIM42Q8IWZ5 723 aa4.58□□□□□ -1.68
CDHR3-206ENST00000468477 FAM20CQ8IXL6 584 aa4.58□□□□□ -1.68
CDHR3-206ENST00000468477 SMAP1Q8IYB5 467 aaPredicted RBP4.58□□□□□ -1.68
CDHR3-206ENST00000468477 FBF1Q8TES7 1133 aa4.58□□□□□ -1.68
CDHR3-206ENST00000468477 CHAC2Q8WUX2 184 aa4.58□□□□□ -1.68
CDHR3-206ENST00000468477 CPLX3Q8WVH0 158 aa4.58□□□□□ -1.68
CDHR3-206ENST00000468477 CCDC113Q9H0I3 377 aa4.58□□□□□ -1.68
CDHR3-206ENST00000468477 EHD4Q9H223 541 aa4.58□□□□□ -1.68
CDHR3-206ENST00000468477 CLEC4MQ9H2X3 399 aaPredicted RBP4.58□□□□□ -1.68
CDHR3-206ENST00000468477 IFT122Q9HBG6 1241 aa4.58□□□□□ -1.68
CDHR3-206ENST00000468477 RAD18Q9NS91 495 aa4.58□□□□□ -1.68
CDHR3-206ENST00000468477 ATG3Q9NT62 314 aa4.58□□□□□ -1.68
CDHR3-206ENST00000468477 NOL7Q9UMY1 257 aaKnown RBP4.58□□□□□ -1.68
CDHR3-206ENST00000468477 EFR3BQ9Y2G0 817 aa4.58□□□□□ -1.68
CDHR3-206ENST00000468477 DAAM1Q9Y4D1 1078 aa4.58□□□□□ -1.68
CDHR3-206ENST00000468477 PPP2R3BQ9Y5P8 575 aa4.58□□□□□ -1.68
CDHR3-206ENST00000468477 A0A096LPE4 126 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 A0A1W2PPZ6 126 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 HMX2A2RU54 273 aa4.57□□□□□ -1.68
CDHR3-206ENST00000468477 GOLGA6CA6NDK9 693 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms