RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 TMOD2Q9NZR1 351 aa23.95■■□□□ 1.42
TMEM53-207ENST00000468117 PI4KBQ9UBF8 816 aa23.95■■□□□ 1.42
TMEM53-207ENST00000468117 TAOK2Q9UL54 1235 aa23.95■■□□□ 1.42
TMEM53-207ENST00000468117 DICER1Q9UPY3 1922 aaKnown RBP23.95■■□□□ 1.42
TMEM53-207ENST00000468117 TCP10L2B9ZVM9 353 aa23.94■■□□□ 1.42
TMEM53-207ENST00000468117 ENTPD3O75355 529 aa23.94■■□□□ 1.42
TMEM53-207ENST00000468117 AKR1B1P15121 316 aa23.94■■□□□ 1.42
TMEM53-207ENST00000468117 RESTQ13127 1097 aa23.94■■□□□ 1.42
TMEM53-207ENST00000468117 CRACR2BQ8N4Y2 399 aaPredicted RBP23.94■■□□□ 1.42
TMEM53-207ENST00000468117 CEP95Q96GE4 821 aa23.94■■□□□ 1.42
TMEM53-207ENST00000468117 ALG1Q9BT22 464 aa23.94■■□□□ 1.42
TMEM53-207ENST00000468117 DNAJC18Q9H819 358 aa23.94■■□□□ 1.42
TMEM53-207ENST00000468117 ZNF70Q9UC06 446 aaPredicted RBP23.94■■□□□ 1.42
TMEM53-207ENST00000468117 FAM196BA6NMK8 535 aa23.94■■□□□ 1.42
TMEM53-207ENST00000468117 FZD9O00144 591 aa23.94■■□□□ 1.42
TMEM53-207ENST00000468117 NCLP19338 710 aaKnown RBP23.94■■□□□ 1.42
TMEM53-207ENST00000468117 ARHGAP27Q6ZUM4 889 aa23.94■■□□□ 1.42
TMEM53-207ENST00000468117 MTMR14Q8NCE2 650 aa23.94■■□□□ 1.42
TMEM53-207ENST00000468117 FBXO18Q8NFZ0 1043 aa23.94■■□□□ 1.42
TMEM53-207ENST00000468117 TMEM47Q9BQJ4 181 aa23.94■■□□□ 1.42
TMEM53-207ENST00000468117 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.94■■□□□ 1.42
TMEM53-207ENST00000468117 RBM28Q9NW13 759 aaKnown RBP23.94■■□□□ 1.42
TMEM53-207ENST00000468117 STK36Q9NRP7 1315 aa23.94■■□□□ 1.42
TMEM53-207ENST00000468117 SBF1O95248 1867 aa23.94■■□□□ 1.42
TMEM53-207ENST00000468117 PLEKHA8P1O95397 391 aa23.93■■□□□ 1.42
TMEM53-207ENST00000468117 TRIM22Q8IYM9 498 aa23.93■■□□□ 1.42
TMEM53-207ENST00000468117 CTCFLQ8NI51 663 aaPredicted RBP23.93■■□□□ 1.42
TMEM53-207ENST00000468117 GUCY1A2P33402 732 aa23.93■■□□□ 1.42
TMEM53-207ENST00000468117 EIF6P56537 245 aaKnown RBP23.93■■□□□ 1.42
TMEM53-207ENST00000468117 SPDYE2Q495Y8 402 aa23.93■■□□□ 1.42
TMEM53-207ENST00000468117 SYT17Q9BSW7 474 aa23.93■■□□□ 1.42
TMEM53-207ENST00000468117 MYOZ2Q9NPC6 264 aa23.93■■□□□ 1.42
TMEM53-207ENST00000468117 GJA3Q9Y6H8 435 aa23.93■■□□□ 1.42
TMEM53-207ENST00000468117 ATRNL1Q5VV63 1379 aa23.93■■□□□ 1.42
TMEM53-207ENST00000468117 PLIN4Q96Q06 1357 aa23.93■■□□□ 1.42
TMEM53-207ENST00000468117 GREB1LQ9C091 1923 aaPredicted RBP23.92■■□□□ 1.42
TMEM53-207ENST00000468117 ZSCAN16Q9H4T2 348 aaPredicted RBP23.92■■□□□ 1.42
TMEM53-207ENST00000468117 NBPF9Q3BBW0 867 aa23.91■■□□□ 1.42
TMEM53-207ENST00000468117 VEZTQ9HBM0 779 aa23.91■■□□□ 1.42
TMEM53-207ENST00000468117 MYH4Q9Y623 1939 aa23.91■■□□□ 1.42
TMEM53-207ENST00000468117 WNT10BO00744 389 aa23.91■■□□□ 1.42
TMEM53-207ENST00000468117 FIBPO43427 364 aa23.91■■□□□ 1.42
TMEM53-207ENST00000468117 FUT2Q10981 343 aa23.91■■□□□ 1.42
TMEM53-207ENST00000468117 TMTC3Q6ZXV5 915 aa23.91■■□□□ 1.42
TMEM53-207ENST00000468117 USP48Q86UV5 1035 aa23.91■■□□□ 1.42
TMEM53-207ENST00000468117 ZBED3Q96IU2 234 aaPredicted RBP23.91■■□□□ 1.42
TMEM53-207ENST00000468117 MTMR7Q9Y216 660 aa23.91■■□□□ 1.42
TMEM53-207ENST00000468117 RPS12P25398 132 aaKnown RBP23.9■■□□□ 1.42
TMEM53-207ENST00000468117 GMPSP49915 693 aaPredicted RBP23.9■■□□□ 1.42
TMEM53-207ENST00000468117 CSRNP1Q96S65 589 aa23.9■■□□□ 1.42
TMEM53-207ENST00000468117 COL2A1P02458 1487 aaPredicted RBP23.9■■□□□ 1.42
TMEM53-207ENST00000468117 ZNF541Q9H0D2 1346 aa23.9■■□□□ 1.42
TMEM53-207ENST00000468117 CLEC10AQ8IUN9 316 aa23.89■■□□□ 1.42
TMEM53-207ENST00000468117 FOXP4Q8IVH2 680 aaPredicted RBP23.89■■□□□ 1.42
TMEM53-207ENST00000468117 RNF26Q9BY78 433 aaPredicted RBP23.89■■□□□ 1.42
TMEM53-207ENST00000468117 TRIM34Q9BYJ4 488 aa23.89■■□□□ 1.42
TMEM53-207ENST00000468117 MTMR4Q9NYA4 1195 aa23.89■■□□□ 1.42
TMEM53-207ENST00000468117 DDX49Q9Y6V7 483 aaKnown RBP23.89■■□□□ 1.42
TMEM53-207ENST00000468117 MPHOSPH10O00566 681 aaKnown RBP23.89■■□□□ 1.41
TMEM53-207ENST00000468117 MYO1BO43795 1136 aa23.89■■□□□ 1.41
TMEM53-207ENST00000468117 DEXIO95424 95 aa23.89■■□□□ 1.41
TMEM53-207ENST00000468117 EGFRP00533 1210 aa23.89■■□□□ 1.41
TMEM53-207ENST00000468117 NOVP48745 357 aa23.89■■□□□ 1.41
TMEM53-207ENST00000468117 SKOR2Q2VWA4 1001 aaPredicted RBP23.89■■□□□ 1.41
TMEM53-207ENST00000468117 SRBD1Q8N5C6 995 aaKnown RBP23.89■■□□□ 1.41
TMEM53-207ENST00000468117 CNTNAP1P78357 1384 aa23.88■■□□□ 1.41
TMEM53-207ENST00000468117 IGKV6D-41A0A0C4DH26 115 aa23.88■■□□□ 1.41
TMEM53-207ENST00000468117 KIF5BP33176 963 aa23.88■■□□□ 1.41
TMEM53-207ENST00000468117 ZNF280AP59817 542 aaPredicted RBP23.88■■□□□ 1.41
TMEM53-207ENST00000468117 KRT85P78386 507 aa23.88■■□□□ 1.41
TMEM53-207ENST00000468117 RBM26Q5T8P6 1007 aaKnown RBP23.88■■□□□ 1.41
TMEM53-207ENST00000468117 KRT40Q6A162 431 aa23.88■■□□□ 1.41
TMEM53-207ENST00000468117 WASF1Q92558 559 aa23.88■■□□□ 1.41
TMEM53-207ENST00000468117 hCG_1642624A0A1W2PR95 340 aa23.88■■□□□ 1.41
TMEM53-207ENST00000468117 TOP1P11387 765 aaKnown RBP23.88■■□□□ 1.41
TMEM53-207ENST00000468117 RASGRP2Q7LDG7 609 aa23.88■■□□□ 1.41
TMEM53-207ENST00000468117 MICALL2Q8IY33 904 aa23.88■■□□□ 1.41
TMEM53-207ENST00000468117 STAG2Q8N3U4 1231 aa23.88■■□□□ 1.41
TMEM53-207ENST00000468117 FAM151AQ8WW52 585 aa23.88■■□□□ 1.41
TMEM53-207ENST00000468117 MAP3K14Q99558 947 aa23.88■■□□□ 1.41
TMEM53-207ENST00000468117 TFIP11Q9UBB9 837 aaKnown RBP23.88■■□□□ 1.41
TMEM53-207ENST00000468117 CNTNAP5Q8WYK1 1306 aa23.87■■□□□ 1.41
TMEM53-207ENST00000468117 LMNB1P20700 586 aa23.87■■□□□ 1.41
TMEM53-207ENST00000468117 AKAP17AQ02040 695 aaKnown RBP23.87■■□□□ 1.41
TMEM53-207ENST00000468117 GRM4Q14833 912 aa23.87■■□□□ 1.41
TMEM53-207ENST00000468117 CERKLQ49MI3 558 aaPredicted RBP23.87■■□□□ 1.41
TMEM53-207ENST00000468117 TATDN1Q6P1N9 297 aa23.87■■□□□ 1.41
TMEM53-207ENST00000468117 METTL16Q86W50 562 aaKnown RBP23.87■■□□□ 1.41
TMEM53-207ENST00000468117 TMEM87AQ8NBN3 555 aa23.87■■□□□ 1.41
TMEM53-207ENST00000468117 V9GY48 417 aaPredicted RBP23.87■■□□□ 1.41
TMEM53-207ENST00000468117 TRIM29Q14134 588 aa23.86■■□□□ 1.41
TMEM53-207ENST00000468117 SHROOM1Q2M3G4 852 aaPredicted RBP23.86■■□□□ 1.41
TMEM53-207ENST00000468117 FKBP1CQ5VVH2 108 aa23.86■■□□□ 1.41
TMEM53-207ENST00000468117 DPF2Q92785 391 aa23.86■■□□□ 1.41
TMEM53-207ENST00000468117 CCDC17Q96LX7 622 aa23.86■■□□□ 1.41
TMEM53-207ENST00000468117 MAD2L2Q9UI95 211 aa23.86■■□□□ 1.41
TMEM53-207ENST00000468117 CNOT7Q9UIV1 285 aaKnown RBP23.86■■□□□ 1.41
TMEM53-207ENST00000468117 PRPF3O43395 683 aaKnown RBP23.86■■□□□ 1.41
TMEM53-207ENST00000468117 GADD45BO75293 160 aaPredicted RBP23.86■■□□□ 1.41
TMEM53-207ENST00000468117 RGS22Q8NE09 1264 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms