RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-231ENST00000467435 PNMA1Q8ND90 353 aa14.28□□□□□ -0.12
HDLBP-231ENST00000467435 NLGN2Q8NFZ4 835 aa14.28□□□□□ -0.12
HDLBP-231ENST00000467435 CNTNAP5Q8WYK1 1306 aa14.28□□□□□ -0.12
HDLBP-231ENST00000467435 RNF26Q9BY78 433 aaPredicted RBP14.28□□□□□ -0.12
HDLBP-231ENST00000467435 SCAND2PQ9GZW5 306 aaPredicted RBP14.28□□□□□ -0.12
HDLBP-231ENST00000467435 TDRD3Q9H7E2 651 aaKnown RBP14.28□□□□□ -0.12
HDLBP-231ENST00000467435 LTBP3Q9NS15 1303 aa14.28□□□□□ -0.12
HDLBP-231ENST00000467435 GJB4Q9NTQ9 266 aa14.28□□□□□ -0.12
HDLBP-231ENST00000467435 ATRNL1Q5VV63 1379 aa14.27□□□□□ -0.12
HDLBP-231ENST00000467435 UBE2Q2LH0YL09 131 aa14.27□□□□□ -0.13
HDLBP-231ENST00000467435 AKR1B1P15121 316 aa14.27□□□□□ -0.13
HDLBP-231ENST00000467435 KIF5BP33176 963 aa14.27□□□□□ -0.13
HDLBP-231ENST00000467435 SHMT1P34896 483 aa14.27□□□□□ -0.13
HDLBP-231ENST00000467435 UBE2HP62256 183 aa14.27□□□□□ -0.13
HDLBP-231ENST00000467435 AKAP17AQ02040 695 aaKnown RBP14.27□□□□□ -0.13
HDLBP-231ENST00000467435 KIF23Q02241 960 aaPredicted RBP14.27□□□□□ -0.13
HDLBP-231ENST00000467435 RASSF7Q02833 373 aa14.27□□□□□ -0.13
HDLBP-231ENST00000467435 CXCL9Q07325 125 aa14.27□□□□□ -0.13
HDLBP-231ENST00000467435 GRM4Q14833 912 aa14.27□□□□□ -0.13
HDLBP-231ENST00000467435 CAVIN1Q6NZI2 390 aaKnown RBP14.27□□□□□ -0.13
HDLBP-231ENST00000467435 ZFPM1Q8IX07 1006 aa14.27□□□□□ -0.13
HDLBP-231ENST00000467435 CCDC82Q8N4S0 544 aa14.27□□□□□ -0.13
HDLBP-231ENST00000467435 AGBL3Q8NEM8 1001 aa14.27□□□□□ -0.13
HDLBP-231ENST00000467435 JDP2Q8WYK2 163 aa14.27□□□□□ -0.13
HDLBP-231ENST00000467435 DHX36Q9H2U1 1008 aaKnown RBP14.27□□□□□ -0.13
HDLBP-231ENST00000467435 TMOD2Q9NZR1 351 aa14.27□□□□□ -0.13
HDLBP-231ENST00000467435 TAOK2Q9UL54 1235 aa14.27□□□□□ -0.13
HDLBP-231ENST00000467435 STX8Q9UNK0 236 aa14.27□□□□□ -0.13
HDLBP-231ENST00000467435 ZBTB12Q9Y330 459 aaPredicted RBP14.27□□□□□ -0.13
HDLBP-231ENST00000467435 SPDYE2BA6NHP3 402 aa14.26□□□□□ -0.13
HDLBP-231ENST00000467435 ENTPD3O75355 529 aa14.26□□□□□ -0.13
HDLBP-231ENST00000467435 SPDYE6P0CI01 402 aa14.26□□□□□ -0.13
HDLBP-231ENST00000467435 GUCY1A2P33402 732 aa14.26□□□□□ -0.13
HDLBP-231ENST00000467435 DLGAP5Q15398 846 aa14.26□□□□□ -0.13
HDLBP-231ENST00000467435 CIAPIN1Q6FI81 312 aa14.26□□□□□ -0.13
HDLBP-231ENST00000467435 BRAPQ7Z569 592 aa14.26□□□□□ -0.13
HDLBP-231ENST00000467435 ZSCAN29Q8IWY8 852 aaPredicted RBP14.26□□□□□ -0.13
HDLBP-231ENST00000467435 OGFOD1Q8N543 542 aa14.26□□□□□ -0.13
HDLBP-231ENST00000467435 CEP95Q96GE4 821 aa14.26□□□□□ -0.13
HDLBP-231ENST00000467435 PRMT6Q96LA8 375 aaPredicted RBP14.26□□□□□ -0.13
HDLBP-231ENST00000467435 SPATA32Q96LK8 384 aa14.26□□□□□ -0.13
HDLBP-231ENST00000467435 ZNF396Q96N95 335 aaPredicted RBP14.26□□□□□ -0.13
HDLBP-231ENST00000467435 MAP3K14Q99558 947 aa14.26□□□□□ -0.13
HDLBP-231ENST00000467435 TMEM47Q9BQJ4 181 aa14.26□□□□□ -0.13
HDLBP-231ENST00000467435 TFIP11Q9UBB9 837 aaKnown RBP14.26□□□□□ -0.13
HDLBP-231ENST00000467435 CFAP45Q9UL16 551 aa14.26□□□□□ -0.13
HDLBP-231ENST00000467435 DDTLA6NHG4 134 aaPredicted RBP14.25□□□□□ -0.13
HDLBP-231ENST00000467435 KIF28PB7ZC32 967 aa14.25□□□□□ -0.13
HDLBP-231ENST00000467435 PRPF3O43395 683 aaKnown RBP14.25□□□□□ -0.13
HDLBP-231ENST00000467435 FUT2Q10981 343 aa14.25□□□□□ -0.13
HDLBP-231ENST00000467435 ATL3Q6DD88 541 aa14.25□□□□□ -0.13
HDLBP-231ENST00000467435 LEO1Q8WVC0 666 aaPredicted RBP14.25□□□□□ -0.13
HDLBP-231ENST00000467435 TRIM34Q9BYJ4 488 aa14.25□□□□□ -0.13
HDLBP-231ENST00000467435 SPON1Q9HCB6 807 aa14.25□□□□□ -0.13
HDLBP-231ENST00000467435 RBM27Q9P2N5 1060 aaKnown RBP14.25□□□□□ -0.13
HDLBP-231ENST00000467435 IGKV6D-41A0A0C4DH26 115 aa14.24□□□□□ -0.13
HDLBP-231ENST00000467435 CLRN2A0PK11 232 aa14.24□□□□□ -0.13
HDLBP-231ENST00000467435 TOP1P11387 765 aaKnown RBP14.24□□□□□ -0.13
HDLBP-231ENST00000467435 DEKP35659 375 aaKnown RBP14.24□□□□□ -0.13
HDLBP-231ENST00000467435 NOVP48745 357 aa14.24□□□□□ -0.13
HDLBP-231ENST00000467435 GNL2Q13823 731 aaKnown RBP14.24□□□□□ -0.13
HDLBP-231ENST00000467435 SPDYE2Q495Y8 402 aa14.24□□□□□ -0.13
HDLBP-231ENST00000467435 SH3BP5LQ7L8J4 393 aa14.24□□□□□ -0.13
HDLBP-231ENST00000467435 SRBD1Q8N5C6 995 aaKnown RBP14.24□□□□□ -0.13
HDLBP-231ENST00000467435 SYAP1Q96A49 352 aaPredicted RBP14.24□□□□□ -0.13
HDLBP-231ENST00000467435 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.24□□□□□ -0.13
HDLBP-231ENST00000467435 DNAJC18Q9H819 358 aa14.24□□□□□ -0.13
HDLBP-231ENST00000467435 PI4KBQ9UBF8 816 aa14.24□□□□□ -0.13
HDLBP-231ENST00000467435 ZNF70Q9UC06 446 aaPredicted RBP14.24□□□□□ -0.13
HDLBP-231ENST00000467435 SBF1O95248 1867 aa14.24□□□□□ -0.13
HDLBP-231ENST00000467435 ATAD5Q96QE3 1844 aa14.24□□□□□ -0.13
HDLBP-231ENST00000467435 MMP1P03956 469 aa14.23□□□□□ -0.13
HDLBP-231ENST00000467435 XBP1P17861 261 aa14.23□□□□□ -0.13
HDLBP-231ENST00000467435 GNAQP50148 359 aa14.23□□□□□ -0.13
HDLBP-231ENST00000467435 TNIP1Q15025 636 aa14.23□□□□□ -0.13
HDLBP-231ENST00000467435 SAFBQ15424 915 aaKnown RBP eCLIP14.23□□□□□ -0.13
HDLBP-231ENST00000467435 PKN1Q16512 942 aa14.23□□□□□ -0.13
HDLBP-231ENST00000467435 TPRNQ4KMQ1 711 aa14.23□□□□□ -0.13
HDLBP-231ENST00000467435 MYSM1Q5VVJ2 828 aa14.23□□□□□ -0.13
HDLBP-231ENST00000467435 MTMR14Q8NCE2 650 aa14.23□□□□□ -0.13
HDLBP-231ENST00000467435 USP28Q96RU2 1077 aa14.23□□□□□ -0.13
HDLBP-231ENST00000467435 FTOQ9C0B1 505 aaKnown RBP eCLIP14.23□□□□□ -0.13
HDLBP-231ENST00000467435 MTMR4Q9NYA4 1195 aa14.23□□□□□ -0.13
HDLBP-231ENST00000467435 TMEM63CQ9P1W3 806 aa14.23□□□□□ -0.13
HDLBP-231ENST00000467435 MTMR7Q9Y216 660 aa14.23□□□□□ -0.13
HDLBP-231ENST00000467435 hCG_1642624A0A1W2PR95 340 aa14.22□□□□□ -0.13
HDLBP-231ENST00000467435 FAM196BA6NMK8 535 aa14.22□□□□□ -0.13
HDLBP-231ENST00000467435 TCP10L2B9ZVM9 353 aa14.22□□□□□ -0.13
HDLBP-231ENST00000467435 MPHOSPH10O00566 681 aaKnown RBP14.22□□□□□ -0.13
HDLBP-231ENST00000467435 SLURP2P0DP57 97 aa14.22□□□□□ -0.13
HDLBP-231ENST00000467435 CEBPZQ03701 1054 aaKnown RBP14.22□□□□□ -0.13
HDLBP-231ENST00000467435 ZSCAN23Q3MJ62 389 aa14.22□□□□□ -0.13
HDLBP-231ENST00000467435 CCDC17Q96LX7 622 aa14.22□□□□□ -0.13
HDLBP-231ENST00000467435 MAD2L2Q9UI95 211 aa14.22□□□□□ -0.13
HDLBP-231ENST00000467435 KCNJ14Q9UNX9 436 aa14.22□□□□□ -0.13
HDLBP-231ENST00000467435 V9GY48 417 aaPredicted RBP14.22□□□□□ -0.13
HDLBP-231ENST00000467435 CNTNAP1P78357 1384 aa14.22□□□□□ -0.13
HDLBP-231ENST00000467435 PALM3A6NDB9 673 aaPredicted RBP14.21□□□□□ -0.13
HDLBP-231ENST00000467435 GOLGA6L4A6NEF3 574 aa14.21□□□□□ -0.13
HDLBP-231ENST00000467435 MYO1BO43795 1136 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms