RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 FNTAP49354 379 aa17.57■□□□□ 0.4
ABCF3-206ENST00000466742 CCDC73Q6ZRK6 1079 aa17.57■□□□□ 0.4
ABCF3-206ENST00000466742 C3orf67Q6ZVT6 689 aa17.57■□□□□ 0.4
ABCF3-206ENST00000466742 CALR3Q96L12 384 aaKnown RBP17.57■□□□□ 0.4
ABCF3-206ENST00000466742 SYF2O95926 243 aaKnown RBP17.56■□□□□ 0.4
ABCF3-206ENST00000466742 WWC2Q6AWC2 1192 aa17.56■□□□□ 0.4
ABCF3-206ENST00000466742 ISM2Q6H9L7 571 aa17.56■□□□□ 0.4
ABCF3-206ENST00000466742 RCOR1Q9UKL0 485 aa17.56■□□□□ 0.4
ABCF3-206ENST00000466742 LRRIQ3A6PVS8 624 aaPredicted RBP17.56■□□□□ 0.4
ABCF3-206ENST00000466742 FAM160A1Q05DH4 1040 aa17.56■□□□□ 0.4
ABCF3-206ENST00000466742 GRIK3Q13003 919 aa17.56■□□□□ 0.4
ABCF3-206ENST00000466742 TUBB2AQ13885 445 aa17.56■□□□□ 0.4
ABCF3-206ENST00000466742 ERCC4Q92889 916 aaPredicted RBP17.56■□□□□ 0.4
ABCF3-206ENST00000466742 TUBB2BQ9BVA1 445 aa17.56■□□□□ 0.4
ABCF3-206ENST00000466742 CARMIL3Q8ND23 1372 aa17.56■□□□□ 0.4
ABCF3-206ENST00000466742 PTH1RQ03431 593 aa17.55■□□□□ 0.4
ABCF3-206ENST00000466742 ITFG2Q969R8 447 aa17.55■□□□□ 0.4
ABCF3-206ENST00000466742 NLRP3Q96P20 1036 aa17.55■□□□□ 0.4
ABCF3-206ENST00000466742 RTN2O75298 545 aa17.55■□□□□ 0.4
ABCF3-206ENST00000466742 WDHD1O75717 1129 aaPredicted RBP17.55■□□□□ 0.4
ABCF3-206ENST00000466742 FSBPO95073 299 aa17.55■□□□□ 0.4
ABCF3-206ENST00000466742 FANCCQ00597 558 aa17.55■□□□□ 0.4
ABCF3-206ENST00000466742 NFIXQ14938 502 aa17.55■□□□□ 0.4
ABCF3-206ENST00000466742 TTC19Q6DKK2 380 aaPredicted RBP17.55■□□□□ 0.4
ABCF3-206ENST00000466742 MAP4K1Q92918 833 aa17.55■□□□□ 0.4
ABCF3-206ENST00000466742 TRIM6Q9C030 488 aaPredicted RBP17.55■□□□□ 0.4
ABCF3-206ENST00000466742 ODF2LQ9ULJ1 636 aa17.55■□□□□ 0.4
ABCF3-206ENST00000466742 C4AP0C0L4 1744 aa17.55■□□□□ 0.4
ABCF3-206ENST00000466742 TBC1D8BQ0IIM8 1120 aa17.54■□□□□ 0.4
ABCF3-206ENST00000466742 NCAPHQ15003 741 aa17.54■□□□□ 0.4
ABCF3-206ENST00000466742 ANKRD18AQ8IVF6 992 aa17.54■□□□□ 0.4
ABCF3-206ENST00000466742 TATDN2Q93075 761 aa17.54■□□□□ 0.4
ABCF3-206ENST00000466742 SPEF2Q9C093 1822 aa17.54■□□□□ 0.4
ABCF3-206ENST00000466742 SLC5A1P13866 664 aa17.54■□□□□ 0.4
ABCF3-206ENST00000466742 VSNL1P62760 191 aa17.54■□□□□ 0.4
ABCF3-206ENST00000466742 ALDH8A1Q9H2A2 487 aaPredicted RBP17.54■□□□□ 0.4
ABCF3-206ENST00000466742 CDC23Q9UJX2 597 aa17.54■□□□□ 0.4
ABCF3-206ENST00000466742 CAPN7Q9Y6W3 813 aa17.54■□□□□ 0.4
ABCF3-206ENST00000466742 HELBQ8NG08 1087 aaPredicted RBP17.53■□□□□ 0.4
ABCF3-206ENST00000466742 SLC24A3Q9HC58 644 aa17.53■□□□□ 0.4
ABCF3-206ENST00000466742 RGS17Q9UGC6 210 aaPredicted RBP17.53■□□□□ 0.4
ABCF3-206ENST00000466742 GYS1P13807 737 aa17.53■□□□□ 0.4
ABCF3-206ENST00000466742 ARID4AP29374 1257 aaPredicted RBP17.53■□□□□ 0.4
ABCF3-206ENST00000466742 ADD1P35611 737 aaKnown RBP17.53■□□□□ 0.4
ABCF3-206ENST00000466742 IRAK1P51617 712 aa17.53■□□□□ 0.4
ABCF3-206ENST00000466742 FKBP4Q02790 459 aaKnown RBP eCLIP17.53■□□□□ 0.4
ABCF3-206ENST00000466742 CHRNDQ07001 517 aa17.53■□□□□ 0.4
ABCF3-206ENST00000466742 SCARF1Q14162 830 aa17.53■□□□□ 0.4
ABCF3-206ENST00000466742 NECTIN1Q15223 517 aa17.53■□□□□ 0.4
ABCF3-206ENST00000466742 MCMDC2Q4G0Z9 681 aa17.53■□□□□ 0.4
ABCF3-206ENST00000466742 ZNF589Q86UQ0 364 aaPredicted RBP17.53■□□□□ 0.4
ABCF3-206ENST00000466742 CCDC12Q8WUD4 166 aaPredicted RBP17.53■□□□□ 0.4
ABCF3-206ENST00000466742 PLCD4Q9BRC7 762 aa17.53■□□□□ 0.4
ABCF3-206ENST00000466742 ZSWIM4Q9H7M6 989 aa17.53■□□□□ 0.4
ABCF3-206ENST00000466742 CD248Q9HCU0 757 aa17.53■□□□□ 0.4
ABCF3-206ENST00000466742 HELLSQ9NRZ9 838 aa17.53■□□□□ 0.4
ABCF3-206ENST00000466742 CBFA2T2O43439 604 aa17.52■□□□□ 0.4
ABCF3-206ENST00000466742 UQCRFS1P1P0C7P4 283 aa17.52■□□□□ 0.4
ABCF3-206ENST00000466742 ADCY2Q08462 1091 aa17.52■□□□□ 0.4
ABCF3-206ENST00000466742 ANKRD1Q15327 319 aa17.52■□□□□ 0.4
ABCF3-206ENST00000466742 DPCR1Q3MIW9 517 aa17.52■□□□□ 0.4
ABCF3-206ENST00000466742 CCDC102BQ68D86 513 aa17.52■□□□□ 0.4
ABCF3-206ENST00000466742 PRPF40BQ6NWY9 871 aaKnown RBP17.52■□□□□ 0.4
ABCF3-206ENST00000466742 BORCS6Q96GS4 357 aa17.52■□□□□ 0.4
ABCF3-206ENST00000466742 IKBKBO14920 756 aa17.52■□□□□ 0.39
ABCF3-206ENST00000466742 TAF5LO75529 589 aa17.52■□□□□ 0.39
ABCF3-206ENST00000466742 APBA3O96018 575 aa17.52■□□□□ 0.39
ABCF3-206ENST00000466742 SKIDA1Q1XH10 827 aa17.52■□□□□ 0.39
ABCF3-206ENST00000466742 IQCA1Q86XH1 822 aa17.52■□□□□ 0.39
ABCF3-206ENST00000466742 IGSF22Q8N9C0 903 aa17.52■□□□□ 0.39
ABCF3-206ENST00000466742 UBR3Q6ZT12 1888 aa17.52■□□□□ 0.39
ABCF3-206ENST00000466742 RNF113AO15541 343 aaKnown RBP17.51■□□□□ 0.39
ABCF3-206ENST00000466742 STX10O60499 249 aa17.51■□□□□ 0.39
ABCF3-206ENST00000466742 MCAMP43121 646 aa17.51■□□□□ 0.39
ABCF3-206ENST00000466742 ZMYM1Q5SVZ6 1142 aa17.51■□□□□ 0.39
ABCF3-206ENST00000466742 VSTM4Q8IW00 320 aa17.51■□□□□ 0.39
ABCF3-206ENST00000466742 KIAA1468Q9P260 1216 aa17.51■□□□□ 0.39
ABCF3-206ENST00000466742 RBM8AQ9Y5S9 174 aaKnown RBP17.51■□□□□ 0.39
ABCF3-206ENST00000466742 MYO1FO00160 1098 aa17.5■□□□□ 0.39
ABCF3-206ENST00000466742 ZFYP08048 801 aaPredicted RBP17.5■□□□□ 0.39
ABCF3-206ENST00000466742 ZAP70P43403 619 aa17.5■□□□□ 0.39
ABCF3-206ENST00000466742 KIF4BQ2VIQ3 1234 aa17.5■□□□□ 0.39
ABCF3-206ENST00000466742 WDR93Q6P2C0 686 aa17.5■□□□□ 0.39
ABCF3-206ENST00000466742 PUF60Q9UHX1 559 aaKnown RBP17.5■□□□□ 0.39
ABCF3-206ENST00000466742 CHGBP05060 677 aa17.5■□□□□ 0.39
ABCF3-206ENST00000466742 PHKA1P46020 1223 aa17.5■□□□□ 0.39
ABCF3-206ENST00000466742 CNBD1Q8NA66 436 aa17.5■□□□□ 0.39
ABCF3-206ENST00000466742 ZNF483Q8TF39 744 aaPredicted RBP17.5■□□□□ 0.39
ABCF3-206ENST00000466742 CELF1Q92879 486 aaKnown RBP17.5■□□□□ 0.39
ABCF3-206ENST00000466742 KAT14Q9H8E8 782 aa17.5■□□□□ 0.39
ABCF3-206ENST00000466742 MYH15Q9Y2K3 1946 aa17.5■□□□□ 0.39
ABCF3-206ENST00000466742 SHTN1A0MZ66 631 aa17.49■□□□□ 0.39
ABCF3-206ENST00000466742 TTC36A6NLP5 189 aa17.49■□□□□ 0.39
ABCF3-206ENST00000466742 ZKSCAN1P17029 563 aaPredicted RBP17.49■□□□□ 0.39
ABCF3-206ENST00000466742 TM4SF1P30408 202 aa17.49■□□□□ 0.39
ABCF3-206ENST00000466742 RPS8P62241 208 aaKnown RBP17.49■□□□□ 0.39
ABCF3-206ENST00000466742 ICA1Q05084 483 aa17.49■□□□□ 0.39
ABCF3-206ENST00000466742 FMR1NBQ8N0W7 255 aaPredicted RBP17.49■□□□□ 0.39
ABCF3-206ENST00000466742 BAG1Q99933 345 aaPredicted RBP17.49■□□□□ 0.39
ABCF3-206ENST00000466742 NBPF3Q9H094 633 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms