RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 KANSL2Q9H9L4 492 aa17.12■□□□□ 0.33
DNMT3A-208ENST00000466601 PHIPQ8WWQ0 1821 aa17.12■□□□□ 0.33
DNMT3A-208ENST00000466601 C19orf81C9J6K1 198 aa17.11■□□□□ 0.33
DNMT3A-208ENST00000466601 REC8O95072 547 aa17.11■□□□□ 0.33
DNMT3A-208ENST00000466601 ICA1Q05084 483 aa17.11■□□□□ 0.33
DNMT3A-208ENST00000466601 MTMR2Q13614 643 aa17.11■□□□□ 0.33
DNMT3A-208ENST00000466601 IFNL1Q8IU54 200 aa17.11■□□□□ 0.33
DNMT3A-208ENST00000466601 ACER1Q8TDN7 264 aa17.11■□□□□ 0.33
DNMT3A-208ENST00000466601 PTPN18Q99952 460 aa17.11■□□□□ 0.33
DNMT3A-208ENST00000466601 LAMA4Q16363 1823 aa17.1■□□□□ 0.33
DNMT3A-208ENST00000466601 IGKV6D-41A0A0C4DH26 115 aa17.1■□□□□ 0.33
DNMT3A-208ENST00000466601 BACE1P56817 501 aa17.1■□□□□ 0.33
DNMT3A-208ENST00000466601 MOGSQ13724 837 aa17.1■□□□□ 0.33
DNMT3A-208ENST00000466601 NECTIN1Q15223 517 aa17.1■□□□□ 0.33
DNMT3A-208ENST00000466601 SH3D19Q5HYK7 790 aa17.1■□□□□ 0.33
DNMT3A-208ENST00000466601 OTUD7BQ6GQQ9 843 aa17.1■□□□□ 0.33
DNMT3A-208ENST00000466601 FASTKD5Q7L8L6 764 aaKnown RBP17.1■□□□□ 0.33
DNMT3A-208ENST00000466601 CLEC10AQ8IUN9 316 aa17.1■□□□□ 0.33
DNMT3A-208ENST00000466601 SIAH1Q8IUQ4 282 aa17.1■□□□□ 0.33
DNMT3A-208ENST00000466601 FEZ1Q99689 392 aa17.1■□□□□ 0.33
DNMT3A-208ENST00000466601 ARHGEF10LQ9HCE6 1279 aa17.1■□□□□ 0.33
DNMT3A-208ENST00000466601 WBP1LQ9NX94 342 aa17.1■□□□□ 0.33
DNMT3A-208ENST00000466601 NEDD4P46934 1319 aa17.1■□□□□ 0.33
DNMT3A-208ENST00000466601 CEP350Q5VT06 3117 aa17.1■□□□□ 0.33
DNMT3A-208ENST00000466601 A0A1W2PRG0 241 aa17.09■□□□□ 0.33
DNMT3A-208ENST00000466601 BTBD19C9JJ37 291 aa17.09■□□□□ 0.33
DNMT3A-208ENST00000466601 IGF2BP3O00425 579 aaKnown RBP eCLIP17.09■□□□□ 0.33
DNMT3A-208ENST00000466601 SLC27A2O14975 620 aa17.09■□□□□ 0.33
DNMT3A-208ENST00000466601 EEF2P13639 858 aaKnown RBP17.09■□□□□ 0.33
DNMT3A-208ENST00000466601 NT5C2P49902 561 aa17.09■□□□□ 0.33
DNMT3A-208ENST00000466601 HMGCS2P54868 508 aa17.09■□□□□ 0.33
DNMT3A-208ENST00000466601 CREB3L3Q68CJ9 461 aa17.09■□□□□ 0.33
DNMT3A-208ENST00000466601 GADL1Q6ZQY3 521 aa17.09■□□□□ 0.33
DNMT3A-208ENST00000466601 ESR2Q92731 530 aa17.09■□□□□ 0.33
DNMT3A-208ENST00000466601 BEGAINQ9BUH8 593 aa17.09■□□□□ 0.33
DNMT3A-208ENST00000466601 KRT23Q9C075 422 aa17.09■□□□□ 0.33
DNMT3A-208ENST00000466601 KIAA1683Q9H0B3 1180 aa17.09■□□□□ 0.33
DNMT3A-208ENST00000466601 CNNM2Q9H8M5 875 aa17.09■□□□□ 0.33
DNMT3A-208ENST00000466601 TMOD4Q9NZQ9 345 aa17.09■□□□□ 0.33
DNMT3A-208ENST00000466601 PLIN4Q96Q06 1357 aa17.09■□□□□ 0.33
DNMT3A-208ENST00000466601 B4E1Z4 1266 aa17.08■□□□□ 0.32
DNMT3A-208ENST00000466601 USP14P54578 494 aa17.08■□□□□ 0.32
DNMT3A-208ENST00000466601 ATP2B2Q01814 1243 aa17.08■□□□□ 0.32
DNMT3A-208ENST00000466601 DGKZQ13574 1117 aa17.08■□□□□ 0.32
DNMT3A-208ENST00000466601 ZYXQ15942 572 aaKnown RBP17.08■□□□□ 0.32
DNMT3A-208ENST00000466601 RNF20Q5VTR2 975 aa17.08■□□□□ 0.32
DNMT3A-208ENST00000466601 USP17L2Q6R6M4 530 aa17.08■□□□□ 0.32
DNMT3A-208ENST00000466601 FAM43AQ8N2R8 423 aa17.08■□□□□ 0.32
DNMT3A-208ENST00000466601 PROCA1Q8NCQ7 364 aaPredicted RBP17.08■□□□□ 0.32
DNMT3A-208ENST00000466601 NKX2-3Q8TAU0 364 aa17.08■□□□□ 0.32
DNMT3A-208ENST00000466601 CEP95Q96GE4 821 aa17.08■□□□□ 0.32
DNMT3A-208ENST00000466601 RNF186Q9NXI6 227 aa17.08■□□□□ 0.32
DNMT3A-208ENST00000466601 MTMR4Q9NYA4 1195 aa17.08■□□□□ 0.32
DNMT3A-208ENST00000466601 NYAP2Q9P242 653 aa17.08■□□□□ 0.32
DNMT3A-208ENST00000466601 TAF6LQ9Y6J9 622 aa17.08■□□□□ 0.32
DNMT3A-208ENST00000466601 E7EWF7 191 aa17.07■□□□□ 0.32
DNMT3A-208ENST00000466601 KDM4AO75164 1064 aa17.07■□□□□ 0.32
DNMT3A-208ENST00000466601 ALDH1A1P00352 501 aa17.07■□□□□ 0.32
DNMT3A-208ENST00000466601 TRDNQ13061 729 aa17.07■□□□□ 0.32
DNMT3A-208ENST00000466601 GPAT2Q6NUI2 795 aa17.07■□□□□ 0.32
DNMT3A-208ENST00000466601 ANKRD23Q86SG2 305 aa17.07■□□□□ 0.32
DNMT3A-208ENST00000466601 SH2D4AQ9H788 454 aa17.07■□□□□ 0.32
DNMT3A-208ENST00000466601 IL17RBQ9NRM6 502 aa17.07■□□□□ 0.32
DNMT3A-208ENST00000466601 EMILIN3Q9NT22 766 aa17.07■□□□□ 0.32
DNMT3A-208ENST00000466601 TCP11L1Q9NUJ3 509 aa17.07■□□□□ 0.32
DNMT3A-208ENST00000466601 CLIP2Q9UDT6 1046 aa17.07■□□□□ 0.32
DNMT3A-208ENST00000466601 TMX2Q9Y320 296 aa17.07■□□□□ 0.32
DNMT3A-208ENST00000466601 GREB1LQ9C091 1923 aaPredicted RBP17.07■□□□□ 0.32
DNMT3A-208ENST00000466601 EPB41L2O43491 1005 aaKnown RBP17.06■□□□□ 0.32
DNMT3A-208ENST00000466601 NMT2O60551 498 aa17.06■□□□□ 0.32
DNMT3A-208ENST00000466601 TRPA1O75762 1119 aa17.06■□□□□ 0.32
DNMT3A-208ENST00000466601 TTLL1O95922 423 aa17.06■□□□□ 0.32
DNMT3A-208ENST00000466601 PPP4R3BQ5MIZ7 849 aa17.06■□□□□ 0.32
DNMT3A-208ENST00000466601 STOX1Q6ZVD7 989 aa17.06■□□□□ 0.32
DNMT3A-208ENST00000466601 NCOA7Q8NI08 942 aa17.06■□□□□ 0.32
DNMT3A-208ENST00000466601 C12orf42Q96LP6 360 aa17.06■□□□□ 0.32
DNMT3A-208ENST00000466601 ZCCHC17Q9NP64 241 aaKnown RBP17.06■□□□□ 0.32
DNMT3A-208ENST00000466601 ZSWIM5Q9P217 1185 aa17.06■□□□□ 0.32
DNMT3A-208ENST00000466601 AGTPBP1Q9UPW5 1226 aa17.06■□□□□ 0.32
DNMT3A-208ENST00000466601 PTPRFP10586 1907 aa17.06■□□□□ 0.32
DNMT3A-208ENST00000466601 PDHXO00330 501 aa17.05■□□□□ 0.32
DNMT3A-208ENST00000466601 CA12O43570 354 aa17.05■□□□□ 0.32
DNMT3A-208ENST00000466601 EIF5BO60841 1220 aaKnown RBP17.05■□□□□ 0.32
DNMT3A-208ENST00000466601 HSPA1AP0DMV8 641 aaKnown RBP17.05■□□□□ 0.32
DNMT3A-208ENST00000466601 HSPA1BP0DMV9 641 aaKnown RBP17.05■□□□□ 0.32
DNMT3A-208ENST00000466601 HSPA4P34932 840 aa17.05■□□□□ 0.32
DNMT3A-208ENST00000466601 TREML2Q5T2D2 321 aa17.05■□□□□ 0.32
DNMT3A-208ENST00000466601 RALYLQ86SE5 291 aaKnown RBP17.05■□□□□ 0.32
DNMT3A-208ENST00000466601 MKL1Q969V6 931 aa17.05■□□□□ 0.32
DNMT3A-208ENST00000466601 USP26Q9BXU7 913 aa17.05■□□□□ 0.32
DNMT3A-208ENST00000466601 VCPKMTQ9H867 229 aa17.05■□□□□ 0.32
DNMT3A-208ENST00000466601 SAGE1Q9NXZ1 904 aa17.05■□□□□ 0.32
DNMT3A-208ENST00000466601 STX8Q9UNK0 236 aa17.05■□□□□ 0.32
DNMT3A-208ENST00000466601 ZKSCAN1P17029 563 aaPredicted RBP17.04■□□□□ 0.32
DNMT3A-208ENST00000466601 NOVP48745 357 aa17.04■□□□□ 0.32
DNMT3A-208ENST00000466601 TAF1CQ15572 869 aaPredicted RBP17.04■□□□□ 0.32
DNMT3A-208ENST00000466601 IQCA1Q86XH1 822 aa17.04■□□□□ 0.32
DNMT3A-208ENST00000466601 ZKSCAN3Q9BRR0 538 aa17.04■□□□□ 0.32
DNMT3A-208ENST00000466601 GOPCQ9HD26 462 aa17.04■□□□□ 0.32
DNMT3A-208ENST00000466601 SLC45A1Q9Y2W3 748 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms