RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 GDF2Q9UK05 429 aaPredicted RBP4.39□□□□□ -1.71
SORT1-202ENST00000466471 FNDC3AQ9Y2H6 1198 aaKnown RBP4.39□□□□□ -1.71
SORT1-202ENST00000466471 EYSQ5T1H1 3165 aa4.39□□□□□ -1.71
SORT1-202ENST00000466471 DLEC1Q9Y238 1755 aa4.39□□□□□ -1.71
SORT1-202ENST00000466471 PPIP5K1Q6PFW1 1433 aa4.38□□□□□ -1.71
SORT1-202ENST00000466471 C4AP0C0L4 1744 aa4.38□□□□□ -1.71
SORT1-202ENST00000466471 BNIP3LO60238 219 aa4.38□□□□□ -1.71
SORT1-202ENST00000466471 PTPROQ16827 1216 aa4.38□□□□□ -1.71
SORT1-202ENST00000466471 DEFB115Q30KQ5 88 aa4.38□□□□□ -1.71
SORT1-202ENST00000466471 CCDC184Q52MB2 194 aa4.38□□□□□ -1.71
SORT1-202ENST00000466471 ZNF394Q53GI3 561 aa4.38□□□□□ -1.71
SORT1-202ENST00000466471 CCDC181Q5TID7 509 aa4.38□□□□□ -1.71
SORT1-202ENST00000466471 LINC00114Q6XXX2 140 aa4.38□□□□□ -1.71
SORT1-202ENST00000466471 ZNF662Q6ZS27 426 aa4.38□□□□□ -1.71
SORT1-202ENST00000466471 ATCAYQ86WG3 371 aa4.38□□□□□ -1.71
SORT1-202ENST00000466471 ZNF295-AS1Q8N0V1 137 aa4.38□□□□□ -1.71
SORT1-202ENST00000466471 NLGN1Q8N2Q7 840 aa4.38□□□□□ -1.71
SORT1-202ENST00000466471 GOLGA6L1Q8N7Z2 621 aa4.38□□□□□ -1.71
SORT1-202ENST00000466471 FLAD1Q8NFF5 587 aa4.38□□□□□ -1.71
SORT1-202ENST00000466471 ACSBG1Q96GR2 724 aa4.38□□□□□ -1.71
SORT1-202ENST00000466471 PIF1Q9H611 641 aa4.38□□□□□ -1.71
SORT1-202ENST00000466471 RNF19AQ9NV58 838 aa4.38□□□□□ -1.71
SORT1-202ENST00000466471 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.38□□□□□ -1.71
SORT1-202ENST00000466471 WDR17Q8IZU2 1322 aa4.38□□□□□ -1.71
SORT1-202ENST00000466471 NSD2O96028 1365 aa4.38□□□□□ -1.71
SORT1-202ENST00000466471 EIF3AQ14152 1382 aaKnown RBP4.38□□□□□ -1.71
SORT1-202ENST00000466471 NSD3Q9BZ95 1437 aa4.38□□□□□ -1.71
SORT1-202ENST00000466471 YTHDC2Q9H6S0 1430 aaKnown RBP4.38□□□□□ -1.71
SORT1-202ENST00000466471 hCG_2014768A0A024R1R8 64 aa4.37□□□□□ -1.71
SORT1-202ENST00000466471 TGFBR3LH3BV60 316 aa4.37□□□□□ -1.71
SORT1-202ENST00000466471 HOXB4P17483 251 aaPredicted RBP4.37□□□□□ -1.71
SORT1-202ENST00000466471 FGFR3P22607 806 aa4.37□□□□□ -1.71
SORT1-202ENST00000466471 ORC1Q13415 861 aa4.37□□□□□ -1.71
SORT1-202ENST00000466471 EFHC2Q5JST6 749 aa4.37□□□□□ -1.71
SORT1-202ENST00000466471 TREML1Q86YW5 311 aa4.37□□□□□ -1.71
SORT1-202ENST00000466471 L3MBTL2Q969R5 705 aa4.37□□□□□ -1.71
SORT1-202ENST00000466471 NUDT16Q96DE0 195 aaKnown RBP4.37□□□□□ -1.71
SORT1-202ENST00000466471 SETDB2Q96T68 719 aa4.37□□□□□ -1.71
SORT1-202ENST00000466471 RSRP1Q9BUV0 290 aa4.37□□□□□ -1.71
SORT1-202ENST00000466471 ZDHHC3Q9NYG2 299 aa4.37□□□□□ -1.71
SORT1-202ENST00000466471 ATXN7L1Q9ULK2 861 aaPredicted RBP4.37□□□□□ -1.71
SORT1-202ENST00000466471 UNC79Q9P2D8 2635 aa4.36□□□□□ -1.71
SORT1-202ENST00000466471 SCN11AQ9UI33 1791 aa4.36□□□□□ -1.71
SORT1-202ENST00000466471 NEURL1BA8MQ27 555 aa4.36□□□□□ -1.71
SORT1-202ENST00000466471 EXOC5O00471 708 aa4.36□□□□□ -1.71
SORT1-202ENST00000466471 KCNQ4P56696 695 aa4.36□□□□□ -1.71
SORT1-202ENST00000466471 PAK2Q13177 524 aa4.36□□□□□ -1.71
SORT1-202ENST00000466471 LBRQ14739 615 aaKnown RBP4.36□□□□□ -1.71
SORT1-202ENST00000466471 RALBP1Q15311 655 aa4.36□□□□□ -1.71
SORT1-202ENST00000466471 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.36□□□□□ -1.71
SORT1-202ENST00000466471 FAM26DQ5JW98 314 aa4.36□□□□□ -1.71
SORT1-202ENST00000466471 SLCO4C1Q6ZQN7 724 aa4.36□□□□□ -1.71
SORT1-202ENST00000466471 Q8N3U1 123 aa4.36□□□□□ -1.71
SORT1-202ENST00000466471 RHBDD1Q8TEB9 315 aa4.36□□□□□ -1.71
SORT1-202ENST00000466471 PMEPA1Q969W9 287 aa4.36□□□□□ -1.71
SORT1-202ENST00000466471 CCDC74AQ96AQ1 378 aa4.36□□□□□ -1.71
SORT1-202ENST00000466471 BTBD6Q96KE9 485 aa4.36□□□□□ -1.71
SORT1-202ENST00000466471 NIFKQ9BYG3 293 aaKnown RBP4.36□□□□□ -1.71
SORT1-202ENST00000466471 CWC22Q9HCG8 908 aaKnown RBP4.36□□□□□ -1.71
SORT1-202ENST00000466471 NDFIP2Q9NV92 336 aa4.36□□□□□ -1.71
SORT1-202ENST00000466471 PPM1HQ9ULR3 514 aa4.36□□□□□ -1.71
SORT1-202ENST00000466471 ZNF232Q9UNY5 417 aa4.36□□□□□ -1.71
SORT1-202ENST00000466471 PCDHGB7Q9Y5F8 929 aa4.36□□□□□ -1.71
SORT1-202ENST00000466471 CACNA1GO43497 2377 aa4.36□□□□□ -1.71
SORT1-202ENST00000466471 KIF7Q2M1P5 1343 aa4.36□□□□□ -1.71
SORT1-202ENST00000466471 BDP1A6H8Y1 2624 aa4.36□□□□□ -1.71
SORT1-202ENST00000466471 BAHCC1Q9P281 2608 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 C1QTNF9BB2RNN3 333 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 OPLAHO14841 1288 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 EIF5BO60841 1220 aaKnown RBP4.35□□□□□ -1.71
SORT1-202ENST00000466471 TNFRSF21O75509 655 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 EPXP11678 715 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 KCNA3P22001 575 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 GSTT1P30711 240 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 MAP2K2P36507 400 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 ECE1P42892 770 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 PLA2G4AP47712 749 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 RRP1P56182 461 aaKnown RBP4.35□□□□□ -1.71
SORT1-202ENST00000466471 ANAPC15P60006 121 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 TCEAL1Q15170 157 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 PLEKHG4Q58EX7 1191 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 TAF7LQ5H9L4 462 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 TOM1L2Q6ZVM7 507 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 ALYREFQ86V81 257 aaKnown RBP4.35□□□□□ -1.71
SORT1-202ENST00000466471 CD163Q86VB7 1156 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 JAZF1Q86VZ6 243 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 LDHDQ86WU2 507 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 MICAL1Q8TDZ2 1067 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 ZDHHC1Q8WTX9 485 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 CAPNS2Q96L46 248 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 CARD10Q9BWT7 1032 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 ZCCHC2Q9C0B9 1178 aaKnown RBP4.35□□□□□ -1.71
SORT1-202ENST00000466471 PHACTR1Q9C0D0 580 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 ZFYVE1Q9HBF4 777 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 KCNQ5Q9NR82 932 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 CABP1Q9NZU7 370 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 ANKIB1Q9P2G1 1089 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 CPSF1Q10570 1443 aaKnown RBP4.35□□□□□ -1.71
SORT1-202ENST00000466471 PAPPA2Q9BXP8 1791 aa4.35□□□□□ -1.71
SORT1-202ENST00000466471 FER1L6Q2WGJ9 1857 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms