RNA–Protein interactions for RNA: ENST00000465352.1

ABCA4-203, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 1,048 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-203ENST00000465352 ELNP15502 786 aa17.24■□□□□ 0.35
ABCA4-203ENST00000465352 GABPAQ06546 454 aa17.24■□□□□ 0.35
ABCA4-203ENST00000465352 ZYXQ15942 572 aaKnown RBP17.24■□□□□ 0.35
ABCA4-203ENST00000465352 CWC22Q9HCG8 908 aaKnown RBP17.24■□□□□ 0.35
ABCA4-203ENST00000465352 MAPK4P31152 587 aa17.23■□□□□ 0.35
ABCA4-203ENST00000465352 PAGR1Q9BTK6 254 aa17.23■□□□□ 0.35
ABCA4-203ENST00000465352 UNC93B1Q9H1C4 597 aa17.23■□□□□ 0.35
ABCA4-203ENST00000465352 MYH7P12883 1935 aa17.22■□□□□ 0.35
ABCA4-203ENST00000465352 HMGCRP04035 888 aa17.22■□□□□ 0.35
ABCA4-203ENST00000465352 ERVK-9P63128 1117 aa17.22■□□□□ 0.35
ABCA4-203ENST00000465352 ERVK-24P63145 666 aa17.22■□□□□ 0.35
ABCA4-203ENST00000465352 CCNA1P78396 465 aa17.22■□□□□ 0.35
ABCA4-203ENST00000465352 SEPT2Q15019 361 aa17.22■□□□□ 0.35
ABCA4-203ENST00000465352 LRRFIP1Q32MZ4 808 aaKnown RBP17.22■□□□□ 0.35
ABCA4-203ENST00000465352 TMEM179Q6ZVK1 233 aa17.22■□□□□ 0.35
ABCA4-203ENST00000465352 U2AF1L4Q8WU68 220 aaKnown RBP17.22■□□□□ 0.35
ABCA4-203ENST00000465352 SOCS4Q8WXH5 440 aa17.22■□□□□ 0.35
ABCA4-203ENST00000465352 NUDT12Q9BQG2 462 aa17.22■□□□□ 0.35
ABCA4-203ENST00000465352 RBPJLQ9UBG7 517 aa17.22■□□□□ 0.35
ABCA4-203ENST00000465352 RABGAP1Q9Y3P9 1069 aa17.22■□□□□ 0.35
ABCA4-203ENST00000465352 PRKAB2O43741 272 aa17.21■□□□□ 0.35
ABCA4-203ENST00000465352 GLRX3O76003 335 aaKnown RBP17.21■□□□□ 0.35
ABCA4-203ENST00000465352 SLC34A2O95436 690 aa17.21■□□□□ 0.35
ABCA4-203ENST00000465352 SGPL1O95470 568 aa17.21■□□□□ 0.35
ABCA4-203ENST00000465352 CATSPERGQ6ZRH7 1159 aa17.21■□□□□ 0.35
ABCA4-203ENST00000465352 TRMT44Q8IYL2 757 aaKnown RBP17.21■□□□□ 0.35
ABCA4-203ENST00000465352 ACER1Q8TDN7 264 aa17.21■□□□□ 0.35
ABCA4-203ENST00000465352 SHISA4Q96DD7 197 aa17.21■□□□□ 0.35
ABCA4-203ENST00000465352 CCDC17Q96LX7 622 aa17.21■□□□□ 0.35
ABCA4-203ENST00000465352 HTATIP2Q9BUP3 242 aa17.21■□□□□ 0.35
ABCA4-203ENST00000465352 ZBTB47Q9UFB7 747 aaPredicted RBP17.21■□□□□ 0.35
ABCA4-203ENST00000465352 GJD2Q9UKL4 321 aa17.21■□□□□ 0.35
ABCA4-203ENST00000465352 SLC4A4Q9Y6R1 1079 aa17.21■□□□□ 0.35
ABCA4-203ENST00000465352 TFRCP02786 760 aaKnown RBP17.2■□□□□ 0.34
ABCA4-203ENST00000465352 ZFYP08048 801 aaPredicted RBP17.2■□□□□ 0.34
ABCA4-203ENST00000465352 CYP2D6P10635 497 aa17.2■□□□□ 0.34
ABCA4-203ENST00000465352 VCAM1P19320 739 aa17.2■□□□□ 0.34
ABCA4-203ENST00000465352 C12orf60Q5U649 245 aa17.2■□□□□ 0.34
ABCA4-203ENST00000465352 KBTBD3Q8NAB2 608 aa17.2■□□□□ 0.34
ABCA4-203ENST00000465352 SH2D4AQ9H788 454 aa17.2■□□□□ 0.34
ABCA4-203ENST00000465352 ARHGEF10LQ9HCE6 1279 aa17.2■□□□□ 0.34
ABCA4-203ENST00000465352 TXNRD2Q9NNW7 524 aa17.2■□□□□ 0.34
ABCA4-203ENST00000465352 DDX60LQ5H9U9 1706 aaKnown RBP17.2■□□□□ 0.34
ABCA4-203ENST00000465352 USP17L12C9JPN9 530 aa17.19■□□□□ 0.34
ABCA4-203ENST00000465352 USP17L21D6R901 530 aa17.19■□□□□ 0.34
ABCA4-203ENST00000465352 ERC2O15083 957 aa17.19■□□□□ 0.34
ABCA4-203ENST00000465352 FARP2O94887 1054 aaPredicted RBP17.19■□□□□ 0.34
ABCA4-203ENST00000465352 GUCY1A2P33402 732 aa17.19■□□□□ 0.34
ABCA4-203ENST00000465352 SLFNL1Q499Z3 407 aa17.19■□□□□ 0.34
ABCA4-203ENST00000465352 PLEKHH3Q7Z736 793 aa17.19■□□□□ 0.34
ABCA4-203ENST00000465352 DPF3Q92784 378 aa17.19■□□□□ 0.34
ABCA4-203ENST00000465352 DYNLL2Q96FJ2 89 aa17.19■□□□□ 0.34
ABCA4-203ENST00000465352 DEFB118Q96PH6 123 aa17.19■□□□□ 0.34
ABCA4-203ENST00000465352 HMX1Q9NP08 348 aaPredicted RBP17.19■□□□□ 0.34
ABCA4-203ENST00000465352 MYH8P13535 1937 aa17.19■□□□□ 0.34
ABCA4-203ENST00000465352 BAZ2AQ9UIF9 1905 aaKnown RBP17.19■□□□□ 0.34
ABCA4-203ENST00000465352 MKI67P46013 3256 aaKnown RBP17.18■□□□□ 0.34
ABCA4-203ENST00000465352 XRCC5P13010 732 aaKnown RBP17.18■□□□□ 0.34
ABCA4-203ENST00000465352 CYP2B6P20813 491 aa17.18■□□□□ 0.34
ABCA4-203ENST00000465352 RGS2P41220 211 aa17.18■□□□□ 0.34
ABCA4-203ENST00000465352 CDK8P49336 464 aa17.18■□□□□ 0.34
ABCA4-203ENST00000465352 RRP1P56182 461 aaKnown RBP17.18■□□□□ 0.34
ABCA4-203ENST00000465352 Q3C1V9 767 aa17.18■□□□□ 0.34
ABCA4-203ENST00000465352 LBX2Q6XYB7 198 aa17.18■□□□□ 0.34
ABCA4-203ENST00000465352 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.18■□□□□ 0.34
ABCA4-203ENST00000465352 PUS7LQ9H0K6 701 aaKnown RBP17.18■□□□□ 0.34
ABCA4-203ENST00000465352 RPAP3Q9H6T3 665 aaPredicted RBP17.18■□□□□ 0.34
ABCA4-203ENST00000465352 PAK6Q9NQU5 681 aaPredicted RBP17.18■□□□□ 0.34
ABCA4-203ENST00000465352 HOXC10Q9NYD6 342 aa17.18■□□□□ 0.34
ABCA4-203ENST00000465352 RPTORQ8N122 1335 aa17.18■□□□□ 0.34
ABCA4-203ENST00000465352 RNF113AO15541 343 aaKnown RBP17.17■□□□□ 0.34
ABCA4-203ENST00000465352 GIMAP6Q6P9H5 292 aa17.17■□□□□ 0.34
ABCA4-203ENST00000465352 C16orf86Q6ZW13 317 aa17.17■□□□□ 0.34
ABCA4-203ENST00000465352 GPR142Q7Z601 462 aa17.17■□□□□ 0.34
ABCA4-203ENST00000465352 SLC44A5Q8NCS7 719 aa17.17■□□□□ 0.34
ABCA4-203ENST00000465352 ARPP21Q9UBL0 812 aaPredicted RBP17.17■□□□□ 0.34
ABCA4-203ENST00000465352 IVNS1ABPQ9Y6Y0 642 aa17.17■□□□□ 0.34
ABCA4-203ENST00000465352 TTC41PQ6P2S7 1318 aa17.17■□□□□ 0.34
ABCA4-203ENST00000465352 PEX10O60683 326 aa17.16■□□□□ 0.34
ABCA4-203ENST00000465352 EVX2Q03828 476 aa17.16■□□□□ 0.34
ABCA4-203ENST00000465352 ICA1Q05084 483 aa17.16■□□□□ 0.34
ABCA4-203ENST00000465352 COG2Q14746 738 aa17.16■□□□□ 0.34
ABCA4-203ENST00000465352 WDR78Q5VTH9 848 aa17.16■□□□□ 0.34
ABCA4-203ENST00000465352 APPBP2Q92624 585 aa17.16■□□□□ 0.34
ABCA4-203ENST00000465352 LPAR1Q92633 364 aa17.16■□□□□ 0.34
ABCA4-203ENST00000465352 STRBPQ96SI9 672 aaKnown RBP17.16■□□□□ 0.34
ABCA4-203ENST00000465352 TANGO6Q9C0B7 1094 aa17.16■□□□□ 0.34
ABCA4-203ENST00000465352 PORCNQ9H237 461 aa17.16■□□□□ 0.34
ABCA4-203ENST00000465352 PCDHB15Q9Y5E8 787 aa17.16■□□□□ 0.34
ABCA4-203ENST00000465352 CYP2D7A0A087X1C5 515 aa17.15■□□□□ 0.34
ABCA4-203ENST00000465352 A0A1W2PRG0 241 aa17.15■□□□□ 0.34
ABCA4-203ENST00000465352 AKR1B1P15121 316 aa17.15■□□□□ 0.34
ABCA4-203ENST00000465352 ZKSCAN1P17029 563 aaPredicted RBP17.15■□□□□ 0.34
ABCA4-203ENST00000465352 GNAT2P19087 354 aa17.15■□□□□ 0.34
ABCA4-203ENST00000465352 CTR9Q6PD62 1173 aa17.15■□□□□ 0.34
ABCA4-203ENST00000465352 UBE2Q1Q7Z7E8 422 aa17.15■□□□□ 0.34
ABCA4-203ENST00000465352 KANSL2Q9H9L4 492 aa17.15■□□□□ 0.34
ABCA4-203ENST00000465352 TMX2Q9Y320 296 aa17.15■□□□□ 0.34
ABCA4-203ENST00000465352 NR2E3Q9Y5X4 410 aa17.15■□□□□ 0.34
ABCA4-203ENST00000465352 SLC15A5A6NIM6 579 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms