RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 BMS1Q14692 1282 aaKnown RBP5.55□□□□□ -1.52
HMGXB4-205ENST00000464480 NFKBIBQ15653 356 aa5.55□□□□□ -1.52
HMGXB4-205ENST00000464480 BEND4Q6ZU67 534 aa5.55□□□□□ -1.52
HMGXB4-205ENST00000464480 NOP9Q86U38 636 aaKnown RBP5.55□□□□□ -1.52
HMGXB4-205ENST00000464480 CELF2-AS1Q8N7Q2 184 aa5.55□□□□□ -1.52
HMGXB4-205ENST00000464480 DHRS1Q96LJ7 313 aa5.55□□□□□ -1.52
HMGXB4-205ENST00000464480 SLC9A7Q96T83 725 aa5.55□□□□□ -1.52
HMGXB4-205ENST00000464480 MIPEPQ99797 713 aa5.55□□□□□ -1.52
HMGXB4-205ENST00000464480 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.55□□□□□ -1.52
HMGXB4-205ENST00000464480 CDK11AQ9UQ88 783 aaPredicted RBP5.55□□□□□ -1.52
HMGXB4-205ENST00000464480 FAM86C2PA6NEL3 165 aa5.54□□□□□ -1.52
HMGXB4-205ENST00000464480 CLEC3AO75596 197 aa5.54□□□□□ -1.52
HMGXB4-205ENST00000464480 DDAH1O94760 285 aa5.54□□□□□ -1.52
HMGXB4-205ENST00000464480 NCAPHQ15003 741 aa5.54□□□□□ -1.52
HMGXB4-205ENST00000464480 ZYXQ15942 572 aaKnown RBP5.54□□□□□ -1.52
HMGXB4-205ENST00000464480 BBS9Q3SYG4 887 aa5.54□□□□□ -1.52
HMGXB4-205ENST00000464480 ZNF746Q6NUN9 644 aaPredicted RBP5.54□□□□□ -1.52
HMGXB4-205ENST00000464480 VHLLQ6RSH7 139 aa5.54□□□□□ -1.52
HMGXB4-205ENST00000464480 LRP10Q7Z4F1 713 aa5.54□□□□□ -1.52
HMGXB4-205ENST00000464480 CLEC10AQ8IUN9 316 aa5.54□□□□□ -1.52
HMGXB4-205ENST00000464480 SLC6A18Q96N87 628 aa5.54□□□□□ -1.52
HMGXB4-205ENST00000464480 DEPDC7Q96QD5 511 aa5.54□□□□□ -1.52
HMGXB4-205ENST00000464480 SRPK1Q96SB4 655 aaKnown RBP5.54□□□□□ -1.52
HMGXB4-205ENST00000464480 LGR6Q9HBX8 967 aa5.54□□□□□ -1.52
HMGXB4-205ENST00000464480 ITGB2P05107 769 aa5.53□□□□□ -1.52
HMGXB4-205ENST00000464480 ETV3P41162 512 aa5.53□□□□□ -1.52
HMGXB4-205ENST00000464480 RNF4P78317 190 aa5.53□□□□□ -1.52
HMGXB4-205ENST00000464480 RASA3Q14644 834 aa5.53□□□□□ -1.52
HMGXB4-205ENST00000464480 LETMD1Q6P1Q0 360 aa5.53□□□□□ -1.52
HMGXB4-205ENST00000464480 C6orf15Q6UXA7 325 aaPredicted RBP5.53□□□□□ -1.52
HMGXB4-205ENST00000464480 SEZ6L2Q6UXD5 910 aa5.53□□□□□ -1.52
HMGXB4-205ENST00000464480 FAM178BQ8IXR5 827 aa5.53□□□□□ -1.52
HMGXB4-205ENST00000464480 BAHD1Q8TBE0 780 aaPredicted RBP5.53□□□□□ -1.52
HMGXB4-205ENST00000464480 SMARCC1Q92922 1105 aaPredicted RBP5.53□□□□□ -1.52
HMGXB4-205ENST00000464480 TP53INP1Q96A56 240 aa5.53□□□□□ -1.52
HMGXB4-205ENST00000464480 SSBP4Q9BWG4 385 aaPredicted RBP5.53□□□□□ -1.52
HMGXB4-205ENST00000464480 PRDM10Q9NQV6 1147 aa5.53□□□□□ -1.52
HMGXB4-205ENST00000464480 ST7Q9NRC1 585 aa5.53□□□□□ -1.52
HMGXB4-205ENST00000464480 SNTG2Q9NY99 539 aa5.53□□□□□ -1.52
HMGXB4-205ENST00000464480 MSRB2Q9Y3D2 182 aa5.53□□□□□ -1.52
HMGXB4-205ENST00000464480 SHROOM4Q9ULL8 1493 aa5.52□□□□□ -1.53
HMGXB4-205ENST00000464480 CCDC85CA6NKD9 419 aa5.52□□□□□ -1.53
HMGXB4-205ENST00000464480 DYNC1LI2O43237 492 aaPredicted RBP5.52□□□□□ -1.53
HMGXB4-205ENST00000464480 UBOX5O94941 541 aa5.52□□□□□ -1.53
HMGXB4-205ENST00000464480 GJB6O95452 261 aa5.52□□□□□ -1.53
HMGXB4-205ENST00000464480 PMS1P54277 932 aaKnown RBP5.52□□□□□ -1.53
HMGXB4-205ENST00000464480 SLC7A5Q01650 507 aa5.52□□□□□ -1.53
HMGXB4-205ENST00000464480 IFRD2Q12894 506 aaPredicted RBP5.52□□□□□ -1.53
HMGXB4-205ENST00000464480 CDK5R2Q13319 367 aa5.52□□□□□ -1.53
HMGXB4-205ENST00000464480 GNPTABQ3T906 1256 aa5.52□□□□□ -1.53
HMGXB4-205ENST00000464480 TOP6BLQ8N6T0 577 aa5.52□□□□□ -1.53
HMGXB4-205ENST00000464480 PSMG3-AS1Q96PY0 264 aa5.52□□□□□ -1.53
HMGXB4-205ENST00000464480 FAM83CQ9BQN1 747 aa5.52□□□□□ -1.53
HMGXB4-205ENST00000464480 CCDC113Q9H0I3 377 aa5.52□□□□□ -1.53
HMGXB4-205ENST00000464480 PIF1Q9H611 641 aa5.52□□□□□ -1.53
HMGXB4-205ENST00000464480 STOML1Q9UBI4 398 aa5.52□□□□□ -1.53
HMGXB4-205ENST00000464480 SUCOQ9UBS9 1254 aaKnown RBP5.52□□□□□ -1.53
HMGXB4-205ENST00000464480 ZNF214Q9UL59 606 aaPredicted RBP5.52□□□□□ -1.53
HMGXB4-205ENST00000464480 CEP131Q9UPN4 1083 aa5.52□□□□□ -1.53
HMGXB4-205ENST00000464480 TMA7Q9Y2S6 64 aaKnown RBP5.52□□□□□ -1.53
HMGXB4-205ENST00000464480 RAXQ9Y2V3 346 aa5.52□□□□□ -1.53
HMGXB4-205ENST00000464480 LTBP3Q9NS15 1303 aa5.51□□□□□ -1.53
HMGXB4-205ENST00000464480 B2RBV5 119 aa5.51□□□□□ -1.53
HMGXB4-205ENST00000464480 PDPK1O15530 556 aa5.51□□□□□ -1.53
HMGXB4-205ENST00000464480 SLITRK5O94991 958 aa5.51□□□□□ -1.53
HMGXB4-205ENST00000464480 NAT2P11245 290 aa5.51□□□□□ -1.53
HMGXB4-205ENST00000464480 CYP7A1P22680 504 aa5.51□□□□□ -1.53
HMGXB4-205ENST00000464480 RASGRF1Q13972 1273 aa5.51□□□□□ -1.53
HMGXB4-205ENST00000464480 PRR23CQ6ZRP0 262 aa5.51□□□□□ -1.53
HMGXB4-205ENST00000464480 EEPD1Q7L9B9 569 aa5.51□□□□□ -1.53
HMGXB4-205ENST00000464480 TMEM192Q8IY95 271 aa5.51□□□□□ -1.53
HMGXB4-205ENST00000464480 DNAJB8Q8NHS0 232 aa5.51□□□□□ -1.53
HMGXB4-205ENST00000464480 PPP1R13LQ8WUF5 828 aa5.51□□□□□ -1.53
HMGXB4-205ENST00000464480 COX4I2Q96KJ9 171 aa5.51□□□□□ -1.53
HMGXB4-205ENST00000464480 MKRN2Q9H000 416 aaKnown RBP5.51□□□□□ -1.53
HMGXB4-205ENST00000464480 C7orf69Q9H7B7 122 aa5.51□□□□□ -1.53
HMGXB4-205ENST00000464480 C1GALT1Q9NS00 363 aa5.51□□□□□ -1.53
HMGXB4-205ENST00000464480 TPX2Q9ULW0 747 aaKnown RBP5.51□□□□□ -1.53
HMGXB4-205ENST00000464480 LOC105371045A0A1W2PR82 267 aa5.5□□□□□ -1.53
HMGXB4-205ENST00000464480 ADAM23O75077 832 aa5.5□□□□□ -1.53
HMGXB4-205ENST00000464480 TDRD10Q5VZ19 366 aaKnown RBP5.5□□□□□ -1.53
HMGXB4-205ENST00000464480 KIAA1211LQ6NV74 962 aa5.5□□□□□ -1.53
HMGXB4-205ENST00000464480 ST13P5Q8NFI4 369 aaPredicted RBP5.5□□□□□ -1.53
HMGXB4-205ENST00000464480 MICAL1Q8TDZ2 1067 aa5.5□□□□□ -1.53
HMGXB4-205ENST00000464480 RNF141Q8WVD5 230 aa5.5□□□□□ -1.53
HMGXB4-205ENST00000464480 KREMEN1Q96MU8 473 aa5.5□□□□□ -1.53
HMGXB4-205ENST00000464480 TBC1D32Q96NH3 1257 aa5.5□□□□□ -1.53
HMGXB4-205ENST00000464480 DUSP23Q9BVJ7 150 aa5.5□□□□□ -1.53
HMGXB4-205ENST00000464480 ASPNQ9BXN1 380 aa5.5□□□□□ -1.53
HMGXB4-205ENST00000464480 PCDHB10Q9UN67 800 aa5.5□□□□□ -1.53
HMGXB4-205ENST00000464480 FURINP09958 794 aa5.49□□□□□ -1.53
HMGXB4-205ENST00000464480 FAM87AP0C7U9 286 aa5.49□□□□□ -1.53
HMGXB4-205ENST00000464480 CYP27A1Q02318 531 aa5.49□□□□□ -1.53
HMGXB4-205ENST00000464480 DOC2BQ14184 412 aa5.49□□□□□ -1.53
HMGXB4-205ENST00000464480 MTERF2Q49AM1 385 aa5.49□□□□□ -1.53
HMGXB4-205ENST00000464480 GIMAP6Q6P9H5 292 aa5.49□□□□□ -1.53
HMGXB4-205ENST00000464480 ZAR1Q86SH2 424 aa5.49□□□□□ -1.53
HMGXB4-205ENST00000464480 CDH24Q86UP0 819 aa5.49□□□□□ -1.53
HMGXB4-205ENST00000464480 PPFIBP1Q86W92 1011 aa5.49□□□□□ -1.53
HMGXB4-205ENST00000464480 CCDC144CPQ8IYA2 1237 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms