RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 NOM1Q5C9Z4 860 aaKnown RBP18.34■□□□□ 0.53
RAB11FIP3-208ENST00000464263 PROCA1Q8NCQ7 364 aaPredicted RBP18.34■□□□□ 0.53
RAB11FIP3-208ENST00000464263 ACER1Q8TDN7 264 aa18.34■□□□□ 0.53
RAB11FIP3-208ENST00000464263 RUFY2Q8WXA3 655 aa18.34■□□□□ 0.53
RAB11FIP3-208ENST00000464263 DSCC1Q9BVC3 393 aa18.34■□□□□ 0.53
RAB11FIP3-208ENST00000464263 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.34■□□□□ 0.53
RAB11FIP3-208ENST00000464263 ZNF287Q9HBT7 754 aa18.34■□□□□ 0.53
RAB11FIP3-208ENST00000464263 TACC3Q9Y6A5 838 aa18.34■□□□□ 0.53
RAB11FIP3-208ENST00000464263 SLC3A2P08195 630 aaKnown RBP18.33■□□□□ 0.52
RAB11FIP3-208ENST00000464263 FGRP09769 529 aa18.33■□□□□ 0.52
RAB11FIP3-208ENST00000464263 PDE4BQ07343 736 aa18.33■□□□□ 0.52
RAB11FIP3-208ENST00000464263 TAF1CQ15572 869 aaPredicted RBP18.33■□□□□ 0.52
RAB11FIP3-208ENST00000464263 INCENPQ9NQS7 918 aa18.33■□□□□ 0.52
RAB11FIP3-208ENST00000464263 AGTPBP1Q9UPW5 1226 aa18.33■□□□□ 0.52
RAB11FIP3-208ENST00000464263 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.33■□□□□ 0.52
RAB11FIP3-208ENST00000464263 SLC45A1Q9Y2W3 748 aa18.33■□□□□ 0.52
RAB11FIP3-208ENST00000464263 A0A1W2PRG0 241 aa18.32■□□□□ 0.52
RAB11FIP3-208ENST00000464263 GPR25O00155 361 aa18.32■□□□□ 0.52
RAB11FIP3-208ENST00000464263 SGSM2O43147 1006 aa18.32■□□□□ 0.52
RAB11FIP3-208ENST00000464263 PRDM1O75626 825 aa18.32■□□□□ 0.52
RAB11FIP3-208ENST00000464263 TREML2Q5T2D2 321 aa18.32■□□□□ 0.52
RAB11FIP3-208ENST00000464263 USP17L2Q6R6M4 530 aa18.32■□□□□ 0.52
RAB11FIP3-208ENST00000464263 ZNF444Q8N0Y2 327 aaPredicted RBP18.32■□□□□ 0.52
RAB11FIP3-208ENST00000464263 KIAA1683Q9H0B3 1180 aa18.32■□□□□ 0.52
RAB11FIP3-208ENST00000464263 ZFYVE28Q9HCC9 887 aa18.32■□□□□ 0.52
RAB11FIP3-208ENST00000464263 EMILIN3Q9NT22 766 aa18.32■□□□□ 0.52
RAB11FIP3-208ENST00000464263 LAMA4Q16363 1823 aa18.31■□□□□ 0.52
RAB11FIP3-208ENST00000464263 C12orf42Q96LP6 360 aa18.31■□□□□ 0.52
RAB11FIP3-208ENST00000464263 NBPF3Q9H094 633 aa18.31■□□□□ 0.52
RAB11FIP3-208ENST00000464263 KANSL2Q9H9L4 492 aa18.31■□□□□ 0.52
RAB11FIP3-208ENST00000464263 IGKV6D-41A0A0C4DH26 115 aa18.3■□□□□ 0.52
RAB11FIP3-208ENST00000464263 TLR2O60603 784 aa18.3■□□□□ 0.52
RAB11FIP3-208ENST00000464263 HAND2P61296 217 aa18.3■□□□□ 0.52
RAB11FIP3-208ENST00000464263 PTH1RQ03431 593 aa18.3■□□□□ 0.52
RAB11FIP3-208ENST00000464263 CLEC10AQ8IUN9 316 aa18.3■□□□□ 0.52
RAB11FIP3-208ENST00000464263 ZNF296Q8WUU4 475 aaPredicted RBP18.3■□□□□ 0.52
RAB11FIP3-208ENST00000464263 TMOD4Q9NZQ9 345 aa18.3■□□□□ 0.52
RAB11FIP3-208ENST00000464263 MYH4Q9Y623 1939 aa18.29■□□□□ 0.52
RAB11FIP3-208ENST00000464263 ADGRA2Q96PE1 1338 aa18.29■□□□□ 0.52
RAB11FIP3-208ENST00000464263 ZNF213O14771 459 aa18.29■□□□□ 0.52
RAB11FIP3-208ENST00000464263 ORC4O43929 436 aa18.29■□□□□ 0.52
RAB11FIP3-208ENST00000464263 EEF2P13639 858 aaKnown RBP18.29■□□□□ 0.52
RAB11FIP3-208ENST00000464263 HOXA7P31268 230 aaPredicted RBP18.29■□□□□ 0.52
RAB11FIP3-208ENST00000464263 USP14P54578 494 aa18.29■□□□□ 0.52
RAB11FIP3-208ENST00000464263 TFAP4Q01664 338 aa18.29■□□□□ 0.52
RAB11FIP3-208ENST00000464263 ICA1Q05084 483 aa18.29■□□□□ 0.52
RAB11FIP3-208ENST00000464263 COL13A1Q5TAT6 717 aaPredicted RBP18.29■□□□□ 0.52
RAB11FIP3-208ENST00000464263 C17orf99Q6UX52 265 aa18.29■□□□□ 0.52
RAB11FIP3-208ENST00000464263 NEDD1Q8NHV4 660 aa18.29■□□□□ 0.52
RAB11FIP3-208ENST00000464263 FEZ1Q99689 392 aa18.29■□□□□ 0.52
RAB11FIP3-208ENST00000464263 CTNNA3Q9UI47 895 aa18.29■□□□□ 0.52
RAB11FIP3-208ENST00000464263 TMX2Q9Y320 296 aa18.29■□□□□ 0.52
RAB11FIP3-208ENST00000464263 FKTNO75072 461 aa18.28■□□□□ 0.52
RAB11FIP3-208ENST00000464263 CYP2C8P10632 490 aa18.28■□□□□ 0.52
RAB11FIP3-208ENST00000464263 ZYXQ15942 572 aaKnown RBP18.28■□□□□ 0.52
RAB11FIP3-208ENST00000464263 FAM47AQ5JRC9 791 aa18.28■□□□□ 0.52
RAB11FIP3-208ENST00000464263 ESYT1Q9BSJ8 1104 aa18.28■□□□□ 0.52
RAB11FIP3-208ENST00000464263 ARHGEF10LQ9HCE6 1279 aa18.28■□□□□ 0.52
RAB11FIP3-208ENST00000464263 TSPY3P0CV98 308 aa18.27■□□□□ 0.52
RAB11FIP3-208ENST00000464263 TSPY8P0CW00 308 aa18.27■□□□□ 0.52
RAB11FIP3-208ENST00000464263 PABPC4Q13310 644 aaKnown RBP eCLIP18.27■□□□□ 0.52
RAB11FIP3-208ENST00000464263 KIAA1755Q5JYT7 1200 aa18.27■□□□□ 0.52
RAB11FIP3-208ENST00000464263 AKNAD1Q5T1N1 836 aa18.27■□□□□ 0.52
RAB11FIP3-208ENST00000464263 TBC1D10CQ8IV04 446 aa18.27■□□□□ 0.52
RAB11FIP3-208ENST00000464263 STAG1Q8WVM7 1258 aa18.27■□□□□ 0.52
RAB11FIP3-208ENST00000464263 PARK7Q99497 189 aaKnown RBP18.27■□□□□ 0.52
RAB11FIP3-208ENST00000464263 NYAP2Q9P242 653 aa18.27■□□□□ 0.52
RAB11FIP3-208ENST00000464263 PLIN4Q96Q06 1357 aa18.27■□□□□ 0.51
RAB11FIP3-208ENST00000464263 PCP11498 1178 aaKnown RBP18.26■□□□□ 0.51
RAB11FIP3-208ENST00000464263 OSBPP22059 807 aa18.26■□□□□ 0.51
RAB11FIP3-208ENST00000464263 SP3Q02447 781 aa18.26■□□□□ 0.51
RAB11FIP3-208ENST00000464263 NKX2-3Q8TAU0 364 aa18.26■□□□□ 0.51
RAB11FIP3-208ENST00000464263 MAP4K1Q92918 833 aa18.26■□□□□ 0.51
RAB11FIP3-208ENST00000464263 MKL1Q969V6 931 aa18.26■□□□□ 0.51
RAB11FIP3-208ENST00000464263 CEP95Q96GE4 821 aa18.26■□□□□ 0.51
RAB11FIP3-208ENST00000464263 ASCC2Q9H1I8 757 aaPredicted RBP18.26■□□□□ 0.51
RAB11FIP3-208ENST00000464263 MTMR4Q9NYA4 1195 aa18.26■□□□□ 0.51
RAB11FIP3-208ENST00000464263 CPA4Q9UI42 421 aa18.26■□□□□ 0.51
RAB11FIP3-208ENST00000464263 CDC45O75419 566 aa18.25■□□□□ 0.51
RAB11FIP3-208ENST00000464263 VCAM1P19320 739 aa18.25■□□□□ 0.51
RAB11FIP3-208ENST00000464263 IMMTQ16891 758 aaKnown RBP18.25■□□□□ 0.51
RAB11FIP3-208ENST00000464263 MFSD6Q6ZSS7 791 aa18.25■□□□□ 0.51
RAB11FIP3-208ENST00000464263 SH2D4AQ9H788 454 aa18.25■□□□□ 0.51
RAB11FIP3-208ENST00000464263 VCPKMTQ9H867 229 aa18.25■□□□□ 0.51
RAB11FIP3-208ENST00000464263 IL17RBQ9NRM6 502 aa18.25■□□□□ 0.51
RAB11FIP3-208ENST00000464263 PNMA3Q9UL41 463 aa18.25■□□□□ 0.51
RAB11FIP3-208ENST00000464263 RLFQ13129 1914 aa18.24■□□□□ 0.51
RAB11FIP3-208ENST00000464263 TSPY2A6NKD2 308 aa18.24■□□□□ 0.51
RAB11FIP3-208ENST00000464263 USP17L15C9J2P7 530 aa18.24■□□□□ 0.51
RAB11FIP3-208ENST00000464263 USP17L13C9JLJ4 530 aa18.24■□□□□ 0.51
RAB11FIP3-208ENST00000464263 USP17L11C9JVI0 530 aa18.24■□□□□ 0.51
RAB11FIP3-208ENST00000464263 USP17L18D6R9N7 530 aa18.24■□□□□ 0.51
RAB11FIP3-208ENST00000464263 USP17L22D6RA61 530 aa18.24■□□□□ 0.51
RAB11FIP3-208ENST00000464263 USP17L17D6RBQ6 530 aa18.24■□□□□ 0.51
RAB11FIP3-208ENST00000464263 USP17L19D6RCP7 530 aa18.24■□□□□ 0.51
RAB11FIP3-208ENST00000464263 USP17L20D6RJB6 530 aa18.24■□□□□ 0.51
RAB11FIP3-208ENST00000464263 RANBP6O60518 1105 aaKnown RBP18.24■□□□□ 0.51
RAB11FIP3-208ENST00000464263 BCRP11274 1271 aa18.24■□□□□ 0.51
RAB11FIP3-208ENST00000464263 NOVP48745 357 aa18.24■□□□□ 0.51
RAB11FIP3-208ENST00000464263 ATP2B2Q01814 1243 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms