RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 DIXDC1Q155Q3 683 aa23.37■■□□□ 1.33
TUBGCP3-204ENST00000464139 CTCFLQ8NI51 663 aaPredicted RBP23.37■■□□□ 1.33
TUBGCP3-204ENST00000464139 LAMB1P07942 1786 aa23.37■■□□□ 1.33
TUBGCP3-204ENST00000464139 CNTNAP5Q8WYK1 1306 aa23.37■■□□□ 1.33
TUBGCP3-204ENST00000464139 NEMFO60524 1076 aa23.37■■□□□ 1.33
TUBGCP3-204ENST00000464139 BMP6P22004 513 aa23.37■■□□□ 1.33
TUBGCP3-204ENST00000464139 TMC6Q7Z403 805 aa23.37■■□□□ 1.33
TUBGCP3-204ENST00000464139 TRIM75PA6NK02 468 aa23.36■■□□□ 1.33
TUBGCP3-204ENST00000464139 WNT7AO00755 349 aa23.36■■□□□ 1.33
TUBGCP3-204ENST00000464139 PRR29P0C7W0 189 aa23.36■■□□□ 1.33
TUBGCP3-204ENST00000464139 CCZ1BP86790 482 aa23.36■■□□□ 1.33
TUBGCP3-204ENST00000464139 CCZ1P86791 482 aaPredicted RBP23.36■■□□□ 1.33
TUBGCP3-204ENST00000464139 GRAMD1CQ8IYS0 662 aa23.36■■□□□ 1.33
TUBGCP3-204ENST00000464139 SH3RF3Q8TEJ3 882 aaPredicted RBP23.36■■□□□ 1.33
TUBGCP3-204ENST00000464139 LEMD3Q9Y2U8 911 aa23.36■■□□□ 1.33
TUBGCP3-204ENST00000464139 KIAA1551Q9HCM1 1747 aa23.36■■□□□ 1.33
TUBGCP3-204ENST00000464139 USP5P45974 858 aa23.36■■□□□ 1.33
TUBGCP3-204ENST00000464139 FANCCQ00597 558 aa23.36■■□□□ 1.33
TUBGCP3-204ENST00000464139 TPD52L1Q16890 204 aaPredicted RBP23.36■■□□□ 1.33
TUBGCP3-204ENST00000464139 DYNLL2Q96FJ2 89 aa23.36■■□□□ 1.33
TUBGCP3-204ENST00000464139 MAST2Q6P0Q8 1798 aa23.36■■□□□ 1.33
TUBGCP3-204ENST00000464139 POSTNQ15063 836 aa23.35■■□□□ 1.33
TUBGCP3-204ENST00000464139 RCSD1Q6JBY9 416 aa23.35■■□□□ 1.33
TUBGCP3-204ENST00000464139 PRR5LQ6MZQ0 368 aa23.35■■□□□ 1.33
TUBGCP3-204ENST00000464139 OLFM4Q6UX06 510 aa23.35■■□□□ 1.33
TUBGCP3-204ENST00000464139 ZNF579Q8NAF0 562 aaKnown RBP23.35■■□□□ 1.33
TUBGCP3-204ENST00000464139 WDR66Q8TBY9 1149 aa23.35■■□□□ 1.33
TUBGCP3-204ENST00000464139 SBF2Q86WG5 1849 aa23.35■■□□□ 1.33
TUBGCP3-204ENST00000464139 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.35■■□□□ 1.33
TUBGCP3-204ENST00000464139 USP27XA6NNY8 438 aa23.35■■□□□ 1.33
TUBGCP3-204ENST00000464139 VEGFAP15692 232 aaPredicted RBP23.35■■□□□ 1.33
TUBGCP3-204ENST00000464139 MYL5Q02045 173 aa23.35■■□□□ 1.33
TUBGCP3-204ENST00000464139 NPY5RQ15761 445 aa23.35■■□□□ 1.33
TUBGCP3-204ENST00000464139 MEX3CQ5U5Q3 659 aaKnown RBP23.35■■□□□ 1.33
TUBGCP3-204ENST00000464139 XDHP47989 1333 aa23.34■■□□□ 1.33
TUBGCP3-204ENST00000464139 RIOK3O14730 519 aaKnown RBP23.34■■□□□ 1.33
TUBGCP3-204ENST00000464139 OSBPL5Q9H0X9 879 aaPredicted RBP23.34■■□□□ 1.33
TUBGCP3-204ENST00000464139 MKRN1Q9UHC7 482 aaKnown RBP23.34■■□□□ 1.33
TUBGCP3-204ENST00000464139 SPATA31A6Q5VVP1 1343 aa23.34■■□□□ 1.33
TUBGCP3-204ENST00000464139 TFAP4Q01664 338 aa23.34■■□□□ 1.33
TUBGCP3-204ENST00000464139 C12orf60Q5U649 245 aa23.33■■□□□ 1.33
TUBGCP3-204ENST00000464139 HOOK1Q9UJC3 728 aaKnown RBP23.33■■□□□ 1.33
TUBGCP3-204ENST00000464139 MAN1B1Q9UKM7 699 aa23.33■■□□□ 1.33
TUBGCP3-204ENST00000464139 TNNT1P13805 278 aa23.33■■□□□ 1.32
TUBGCP3-204ENST00000464139 GSDMDP57764 484 aa23.33■■□□□ 1.32
TUBGCP3-204ENST00000464139 GPSM2P81274 684 aa23.33■■□□□ 1.32
TUBGCP3-204ENST00000464139 ZNF174Q15697 407 aa23.33■■□□□ 1.32
TUBGCP3-204ENST00000464139 TNFRSF25Q93038 417 aa23.33■■□□□ 1.32
TUBGCP3-204ENST00000464139 EPSTI1Q96J88 318 aa23.33■■□□□ 1.32
TUBGCP3-204ENST00000464139 IMPACTQ9P2X3 320 aa23.33■■□□□ 1.32
TUBGCP3-204ENST00000464139 GTF2F1P35269 517 aaKnown RBP eCLIP23.32■■□□□ 1.323e-9■■■■■ 33.4
TUBGCP3-204ENST00000464139 ZNF804AQ7Z570 1209 aa23.32■■□□□ 1.32
TUBGCP3-204ENST00000464139 ELOA2Q8IYF1 753 aaPredicted RBP23.32■■□□□ 1.32
TUBGCP3-204ENST00000464139 DPF2Q92785 391 aa23.32■■□□□ 1.32
TUBGCP3-204ENST00000464139 RPGRQ92834 1020 aaKnown RBP23.32■■□□□ 1.32
TUBGCP3-204ENST00000464139 BRMS1Q9HCU9 246 aa23.32■■□□□ 1.32
TUBGCP3-204ENST00000464139 IL17RBQ9NRM6 502 aa23.32■■□□□ 1.32
TUBGCP3-204ENST00000464139 FANCLQ9NW38 375 aa23.32■■□□□ 1.32
TUBGCP3-204ENST00000464139 ACTN4O43707 911 aaKnown RBP23.32■■□□□ 1.32
TUBGCP3-204ENST00000464139 ZNF827Q17R98 1081 aa23.32■■□□□ 1.32
TUBGCP3-204ENST00000464139 ADAMTS3O15072 1205 aa23.31■■□□□ 1.32
TUBGCP3-204ENST00000464139 HSPA1LP34931 641 aa23.31■■□□□ 1.32
TUBGCP3-204ENST00000464139 ARMCX5Q6P1M9 558 aa23.31■■□□□ 1.32
TUBGCP3-204ENST00000464139 TMED8Q6PL24 325 aaPredicted RBP23.31■■□□□ 1.32
TUBGCP3-204ENST00000464139 SEPT12Q8IYM1 358 aa23.31■■□□□ 1.32
TUBGCP3-204ENST00000464139 TGFBRAP1Q8WUH2 860 aa23.31■■□□□ 1.32
TUBGCP3-204ENST00000464139 A0A087X0B3 334 aa23.31■■□□□ 1.32
TUBGCP3-204ENST00000464139 SCG2P13521 617 aa23.31■■□□□ 1.32
TUBGCP3-204ENST00000464139 KAT14Q9H8E8 782 aa23.31■■□□□ 1.32
TUBGCP3-204ENST00000464139 TRMT1Q9NXH9 659 aaKnown RBP23.31■■□□□ 1.32
TUBGCP3-204ENST00000464139 SERPINC1P01008 464 aa23.3■■□□□ 1.32
TUBGCP3-204ENST00000464139 NLRP5P59047 1200 aa23.3■■□□□ 1.32
TUBGCP3-204ENST00000464139 HSP90AA4PQ58FG1 418 aa23.3■■□□□ 1.32
TUBGCP3-204ENST00000464139 SMARCE1Q969G3 411 aa23.3■■□□□ 1.32
TUBGCP3-204ENST00000464139 DHX58Q96C10 678 aa23.3■■□□□ 1.32
TUBGCP3-204ENST00000464139 UBASH3AP57075 661 aa23.3■■□□□ 1.32
TUBGCP3-204ENST00000464139 SLC44A5Q8NCS7 719 aa23.3■■□□□ 1.32
TUBGCP3-204ENST00000464139 MKNK2Q9HBH9 465 aa23.3■■□□□ 1.32
TUBGCP3-204ENST00000464139 AFF2P51816 1311 aa23.29■■□□□ 1.32
TUBGCP3-204ENST00000464139 USP17L3A6NCW0 530 aa23.29■■□□□ 1.32
TUBGCP3-204ENST00000464139 USP17L4A6NCW7 530 aa23.29■■□□□ 1.32
TUBGCP3-204ENST00000464139 UFL1O94874 794 aa23.29■■□□□ 1.32
TUBGCP3-204ENST00000464139 GYS1P13807 737 aa23.29■■□□□ 1.32
TUBGCP3-204ENST00000464139 SARSP49591 514 aaKnown RBP23.29■■□□□ 1.32
TUBGCP3-204ENST00000464139 PTPN21Q16825 1174 aa23.29■■□□□ 1.32
TUBGCP3-204ENST00000464139 TTC38Q5R3I4 469 aa23.29■■□□□ 1.32
TUBGCP3-204ENST00000464139 USP17L1Q7RTZ2 530 aa23.29■■□□□ 1.32
TUBGCP3-204ENST00000464139 SAP30BPQ9UHR5 308 aaKnown RBP23.29■■□□□ 1.32
TUBGCP3-204ENST00000464139 BAG3O95817 575 aa23.28■■□□□ 1.32
TUBGCP3-204ENST00000464139 GSTO1P78417 241 aa23.28■■□□□ 1.32
TUBGCP3-204ENST00000464139 PFKFB3Q16875 520 aaPredicted RBP23.28■■□□□ 1.32
TUBGCP3-204ENST00000464139 NT5DC1Q5TFE4 455 aa23.28■■□□□ 1.32
TUBGCP3-204ENST00000464139 PIK3AP1Q6ZUJ8 805 aa23.28■■□□□ 1.32
TUBGCP3-204ENST00000464139 MAPKAPK5Q8IW41 473 aa23.28■■□□□ 1.32
TUBGCP3-204ENST00000464139 STAG2Q8N3U4 1231 aa23.28■■□□□ 1.32
TUBGCP3-204ENST00000464139 PNMA1Q8ND90 353 aa23.28■■□□□ 1.32
TUBGCP3-204ENST00000464139 SYMPKQ92797 1274 aaKnown RBP23.28■■□□□ 1.32
TUBGCP3-204ENST00000464139 ZBTB22O15209 634 aa23.28■■□□□ 1.32
TUBGCP3-204ENST00000464139 PLCD1P51178 756 aa23.28■■□□□ 1.32
TUBGCP3-204ENST00000464139 CERKQ8TCT0 537 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms