RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 USP17L17D6RBQ6 530 aa24.78■■□□□ 1.56
PDLIM4-205ENST00000463615 USP17L19D6RCP7 530 aa24.78■■□□□ 1.56
PDLIM4-205ENST00000463615 USP17L20D6RJB6 530 aa24.78■■□□□ 1.56
PDLIM4-205ENST00000463615 EVX2Q03828 476 aa24.78■■□□□ 1.56
PDLIM4-205ENST00000463615 USP17L24Q0WX57 530 aa24.78■■□□□ 1.56
PDLIM4-205ENST00000463615 POTEEQ6S8J3 1075 aa24.78■■□□□ 1.56
PDLIM4-205ENST00000463615 LBX2Q6XYB7 198 aa24.78■■□□□ 1.56
PDLIM4-205ENST00000463615 FEZ1Q99689 392 aa24.78■■□□□ 1.56
PDLIM4-205ENST00000463615 BCL11AQ9H165 835 aa24.78■■□□□ 1.56
PDLIM4-205ENST00000463615 UNC93B1Q9H1C4 597 aa24.78■■□□□ 1.56
PDLIM4-205ENST00000463615 PRKAB2O43741 272 aa24.77■■□□□ 1.56
PDLIM4-205ENST00000463615 ERVK-9P63128 1117 aa24.77■■□□□ 1.56
PDLIM4-205ENST00000463615 ERVK-24P63145 666 aa24.77■■□□□ 1.56
PDLIM4-205ENST00000463615 SLFNL1Q499Z3 407 aa24.77■■□□□ 1.56
PDLIM4-205ENST00000463615 CATSPERGQ6ZRH7 1159 aa24.77■■□□□ 1.56
PDLIM4-205ENST00000463615 ACER1Q8TDN7 264 aa24.77■■□□□ 1.56
PDLIM4-205ENST00000463615 U2AF1L4Q8WU68 220 aaKnown RBP24.77■■□□□ 1.56
PDLIM4-205ENST00000463615 GCC1Q96CN9 775 aa24.77■■□□□ 1.56
PDLIM4-205ENST00000463615 PAK6Q9NQU5 681 aaPredicted RBP24.77■■□□□ 1.56
PDLIM4-205ENST00000463615 SGPL1O95470 568 aa24.76■■□□□ 1.55
PDLIM4-205ENST00000463615 VCAM1P19320 739 aa24.76■■□□□ 1.55
PDLIM4-205ENST00000463615 MAPK4P31152 587 aa24.76■■□□□ 1.55
PDLIM4-205ENST00000463615 SEPT2Q15019 361 aa24.76■■□□□ 1.55
PDLIM4-205ENST00000463615 C12orf60Q5U649 245 aa24.76■■□□□ 1.55
PDLIM4-205ENST00000463615 RABGAP1Q9Y3P9 1069 aa24.76■■□□□ 1.55
PDLIM4-205ENST00000463615 PLXNB2O15031 1838 aa24.75■■□□□ 1.55
PDLIM4-205ENST00000463615 HMGCRP04035 888 aa24.75■■□□□ 1.55
PDLIM4-205ENST00000463615 CHGBP05060 677 aa24.75■■□□□ 1.55
PDLIM4-205ENST00000463615 CYP2D6P10635 497 aa24.75■■□□□ 1.55
PDLIM4-205ENST00000463615 XRCC5P13010 732 aaKnown RBP24.75■■□□□ 1.55
PDLIM4-205ENST00000463615 Q3C1V9 767 aa24.75■■□□□ 1.55
PDLIM4-205ENST00000463615 TMEM179Q6ZVK1 233 aa24.75■■□□□ 1.55
PDLIM4-205ENST00000463615 KBTBD3Q8NAB2 608 aa24.75■■□□□ 1.55
PDLIM4-205ENST00000463615 GPATCH3Q96I76 525 aa24.75■■□□□ 1.55
PDLIM4-205ENST00000463615 PCDHB15Q9Y5E8 787 aa24.75■■□□□ 1.55
PDLIM4-205ENST00000463615 SOCS4Q8WXH5 440 aa24.74■■□□□ 1.55
PDLIM4-205ENST00000463615 USP6NLQ92738 828 aa24.74■■□□□ 1.55
PDLIM4-205ENST00000463615 CCDC17Q96LX7 622 aa24.74■■□□□ 1.55
PDLIM4-205ENST00000463615 PUS7LQ9H0K6 701 aaKnown RBP24.74■■□□□ 1.55
PDLIM4-205ENST00000463615 RRP1P56182 461 aaKnown RBP24.73■■□□□ 1.55
PDLIM4-205ENST00000463615 ZYXQ15942 572 aaKnown RBP24.73■■□□□ 1.55
PDLIM4-205ENST00000463615 NUDT12Q9BQG2 462 aa24.73■■□□□ 1.55
PDLIM4-205ENST00000463615 CRISPLD2Q9H0B8 497 aa24.73■■□□□ 1.55
PDLIM4-205ENST00000463615 TTC41PQ6P2S7 1318 aa24.72■■□□□ 1.55
PDLIM4-205ENST00000463615 A0A1W2PRG0 241 aa24.72■■□□□ 1.55
PDLIM4-205ENST00000463615 USP17L12C9JPN9 530 aa24.72■■□□□ 1.55
PDLIM4-205ENST00000463615 USP17L21D6R901 530 aa24.72■■□□□ 1.55
PDLIM4-205ENST00000463615 PEX10O60683 326 aa24.72■■□□□ 1.55
PDLIM4-205ENST00000463615 CNMDO75829 334 aa24.72■■□□□ 1.55
PDLIM4-205ENST00000463615 C16orf86Q6ZW13 317 aa24.72■■□□□ 1.55
PDLIM4-205ENST00000463615 AMOTL1Q8IY63 956 aa24.72■■□□□ 1.55
PDLIM4-205ENST00000463615 SLC44A5Q8NCS7 719 aa24.72■■□□□ 1.55
PDLIM4-205ENST00000463615 DYNLL2Q96FJ2 89 aa24.72■■□□□ 1.55
PDLIM4-205ENST00000463615 DDRGK1Q96HY6 314 aa24.72■■□□□ 1.55
PDLIM4-205ENST00000463615 PORCNQ9H237 461 aa24.72■■□□□ 1.55
PDLIM4-205ENST00000463615 SLC4A4Q9Y6R1 1079 aa24.72■■□□□ 1.55
PDLIM4-205ENST00000463615 BAZ2AQ9UIF9 1905 aaKnown RBP24.71■■□□□ 1.55
PDLIM4-205ENST00000463615 MORN1Q5T089 497 aa24.71■■□□□ 1.55
PDLIM4-205ENST00000463615 GIMAP6Q6P9H5 292 aa24.71■■□□□ 1.55
PDLIM4-205ENST00000463615 GPR142Q7Z601 462 aa24.71■■□□□ 1.55
PDLIM4-205ENST00000463615 TRMT44Q8IYL2 757 aaKnown RBP24.71■■□□□ 1.55
PDLIM4-205ENST00000463615 STRBPQ96SI9 672 aaKnown RBP24.71■■□□□ 1.55
PDLIM4-205ENST00000463615 RPTORQ8N122 1335 aa24.7■■□□□ 1.54
PDLIM4-205ENST00000463615 MPHOSPH10O00566 681 aaKnown RBP24.7■■□□□ 1.54
PDLIM4-205ENST00000463615 ZFYP08048 801 aaPredicted RBP24.7■■□□□ 1.54
PDLIM4-205ENST00000463615 CDK8P49336 464 aa24.7■■□□□ 1.54
PDLIM4-205ENST00000463615 CCNA1P78396 465 aa24.7■■□□□ 1.54
PDLIM4-205ENST00000463615 MAP3K21Q5TCX8 1036 aa24.7■■□□□ 1.54
PDLIM4-205ENST00000463615 CTR9Q6PD62 1173 aa24.7■■□□□ 1.54
PDLIM4-205ENST00000463615 PLEKHH3Q7Z736 793 aa24.7■■□□□ 1.54
PDLIM4-205ENST00000463615 SIAH1Q8IUQ4 282 aa24.7■■□□□ 1.54
PDLIM4-205ENST00000463615 PAGR1Q9BTK6 254 aa24.7■■□□□ 1.54
PDLIM4-205ENST00000463615 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.7■■□□□ 1.54
PDLIM4-205ENST00000463615 RPAP3Q9H6T3 665 aaPredicted RBP24.7■■□□□ 1.54
PDLIM4-205ENST00000463615 SPDYE16A6NNV3 312 aaPredicted RBP24.69■■□□□ 1.54
PDLIM4-205ENST00000463615 AKR1B1P15121 316 aa24.69■■□□□ 1.54
PDLIM4-205ENST00000463615 SBK1Q52WX2 424 aa24.69■■□□□ 1.54
PDLIM4-205ENST00000463615 TRIB2Q92519 343 aa24.69■■□□□ 1.54
PDLIM4-205ENST00000463615 APPBP2Q92624 585 aa24.69■■□□□ 1.54
PDLIM4-205ENST00000463615 LPAR1Q92633 364 aa24.69■■□□□ 1.54
PDLIM4-205ENST00000463615 DEFB118Q96PH6 123 aa24.69■■□□□ 1.54
PDLIM4-205ENST00000463615 ARPP21Q9UBL0 812 aaPredicted RBP24.69■■□□□ 1.54
PDLIM4-205ENST00000463615 TMX2Q9Y320 296 aa24.69■■□□□ 1.54
PDLIM4-205ENST00000463615 RNF113AO15541 343 aaKnown RBP24.68■■□□□ 1.54
PDLIM4-205ENST00000463615 FARP2O94887 1054 aaPredicted RBP24.68■■□□□ 1.54
PDLIM4-205ENST00000463615 HTATIP2Q9BUP3 242 aa24.68■■□□□ 1.54
PDLIM4-205ENST00000463615 SH2D4AQ9H788 454 aa24.68■■□□□ 1.54
PDLIM4-205ENST00000463615 MYH8P13535 1937 aa24.68■■□□□ 1.54
PDLIM4-205ENST00000463615 CEP290O15078 2479 aa24.67■■□□□ 1.54
PDLIM4-205ENST00000463615 CYP2D7A0A087X1C5 515 aa24.67■■□□□ 1.54
PDLIM4-205ENST00000463615 SMIM22K7EJ46 135 aa24.67■■□□□ 1.54
PDLIM4-205ENST00000463615 CYP2B6P20813 491 aa24.67■■□□□ 1.54
PDLIM4-205ENST00000463615 RGS2P41220 211 aa24.67■■□□□ 1.54
PDLIM4-205ENST00000463615 COG2Q14746 738 aa24.67■■□□□ 1.54
PDLIM4-205ENST00000463615 CCAR1Q8IX12 1150 aaKnown RBP24.67■■□□□ 1.54
PDLIM4-205ENST00000463615 PI4K2BQ8TCG2 481 aa24.67■■□□□ 1.54
PDLIM4-205ENST00000463615 OSBP2Q969R2 916 aa24.67■■□□□ 1.54
PDLIM4-205ENST00000463615 ARHGEF10LQ9HCE6 1279 aa24.67■■□□□ 1.54
PDLIM4-205ENST00000463615 HMX1Q9NP08 348 aaPredicted RBP24.67■■□□□ 1.54
PDLIM4-205ENST00000463615 HOXC10Q9NYD6 342 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms