RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 ABCB5Q2M3G0 1257 aa14.35□□□□□ -0.11
RTCB-202ENST00000463455 LCORLQ8N3X6 602 aa14.35□□□□□ -0.11
RTCB-202ENST00000463455 ANKRD13CQ8N6S4 541 aa14.35□□□□□ -0.11
RTCB-202ENST00000463455 NKX2-3Q8TAU0 364 aa14.35□□□□□ -0.11
RTCB-202ENST00000463455 EDC3Q96F86 508 aaKnown RBP14.35□□□□□ -0.11
RTCB-202ENST00000463455 DDRGK1Q96HY6 314 aa14.35□□□□□ -0.11
RTCB-202ENST00000463455 KIAA1683Q9H0B3 1180 aa14.35□□□□□ -0.11
RTCB-202ENST00000463455 SHMT1P34896 483 aa14.34□□□□□ -0.11
RTCB-202ENST00000463455 SLC4A8Q2Y0W8 1093 aa14.34□□□□□ -0.11
RTCB-202ENST00000463455 LRRFIP1Q32MZ4 808 aaKnown RBP14.34□□□□□ -0.11
RTCB-202ENST00000463455 AMOTL1Q8IY63 956 aa14.34□□□□□ -0.11
RTCB-202ENST00000463455 SH3TC2Q8TF17 1288 aa14.34□□□□□ -0.11
RTCB-202ENST00000463455 CENPFP49454 3210 aa14.34□□□□□ -0.11
RTCB-202ENST00000463455 TTC41PQ6P2S7 1318 aa14.34□□□□□ -0.11
RTCB-202ENST00000463455 MBD4O95243 580 aa14.33□□□□□ -0.12
RTCB-202ENST00000463455 ZFYP08048 801 aaPredicted RBP14.33□□□□□ -0.12
RTCB-202ENST00000463455 FLT3LGP49771 235 aa14.33□□□□□ -0.12
RTCB-202ENST00000463455 KBTBD3Q8NAB2 608 aa14.33□□□□□ -0.12
RTCB-202ENST00000463455 SDR42E1Q8WUS8 393 aa14.33□□□□□ -0.12
RTCB-202ENST00000463455 FEZ1Q99689 392 aa14.33□□□□□ -0.12
RTCB-202ENST00000463455 EMILIN3Q9NT22 766 aa14.33□□□□□ -0.12
RTCB-202ENST00000463455 ERC2O15083 957 aa14.32□□□□□ -0.12
RTCB-202ENST00000463455 SMARCA5O60264 1052 aaPredicted RBP14.32□□□□□ -0.12
RTCB-202ENST00000463455 ADCY3O60266 1144 aa14.32□□□□□ -0.12
RTCB-202ENST00000463455 GJB1P08034 283 aa14.32□□□□□ -0.12
RTCB-202ENST00000463455 EN2P19622 333 aaPredicted RBP14.32□□□□□ -0.12
RTCB-202ENST00000463455 HERVK_113P62684 666 aa14.32□□□□□ -0.12
RTCB-202ENST00000463455 PLCB2Q00722 1185 aa14.32□□□□□ -0.12
RTCB-202ENST00000463455 RAB3GAP1Q15042 981 aa14.32□□□□□ -0.12
RTCB-202ENST00000463455 SHROOM1Q2M3G4 852 aaPredicted RBP14.32□□□□□ -0.12
RTCB-202ENST00000463455 GIMAP6Q6P9H5 292 aa14.32□□□□□ -0.12
RTCB-202ENST00000463455 CCDC17Q96LX7 622 aa14.32□□□□□ -0.12
RTCB-202ENST00000463455 ARMT1Q9H993 441 aa14.32□□□□□ -0.12
RTCB-202ENST00000463455 GABRQQ9UN88 632 aa14.32□□□□□ -0.12
RTCB-202ENST00000463455 PCDHB15Q9Y5E8 787 aa14.32□□□□□ -0.12
RTCB-202ENST00000463455 DOCK3Q8IZD9 2030 aa14.31□□□□□ -0.12
RTCB-202ENST00000463455 USP17L15C9J2P7 530 aa14.31□□□□□ -0.12
RTCB-202ENST00000463455 USP17L13C9JLJ4 530 aa14.31□□□□□ -0.12
RTCB-202ENST00000463455 USP17L11C9JVI0 530 aa14.31□□□□□ -0.12
RTCB-202ENST00000463455 USP17L18D6R9N7 530 aa14.31□□□□□ -0.12
RTCB-202ENST00000463455 USP17L22D6RA61 530 aa14.31□□□□□ -0.12
RTCB-202ENST00000463455 USP17L17D6RBQ6 530 aa14.31□□□□□ -0.12
RTCB-202ENST00000463455 USP17L19D6RCP7 530 aa14.31□□□□□ -0.12
RTCB-202ENST00000463455 USP17L20D6RJB6 530 aa14.31□□□□□ -0.12
RTCB-202ENST00000463455 USP17L24Q0WX57 530 aa14.31□□□□□ -0.12
RTCB-202ENST00000463455 LBX2Q6XYB7 198 aa14.31□□□□□ -0.12
RTCB-202ENST00000463455 TMEM179Q6ZVK1 233 aa14.31□□□□□ -0.12
RTCB-202ENST00000463455 GPRC5AQ8NFJ5 357 aa14.31□□□□□ -0.12
RTCB-202ENST00000463455 P2RX7Q99572 595 aaKnown RBP14.31□□□□□ -0.12
RTCB-202ENST00000463455 BCL11AQ9H165 835 aa14.31□□□□□ -0.12
RTCB-202ENST00000463455 GLRX3O76003 335 aaKnown RBP14.3□□□□□ -0.12
RTCB-202ENST00000463455 MAPK4P31152 587 aa14.3□□□□□ -0.12
RTCB-202ENST00000463455 GJA8P48165 433 aa14.3□□□□□ -0.12
RTCB-202ENST00000463455 C12orf60Q5U649 245 aa14.3□□□□□ -0.12
RTCB-202ENST00000463455 SOCS4Q8WXH5 440 aa14.3□□□□□ -0.12
RTCB-202ENST00000463455 BBXQ8WY36 941 aaPredicted RBP14.3□□□□□ -0.12
RTCB-202ENST00000463455 APPBP2Q92624 585 aa14.3□□□□□ -0.12
RTCB-202ENST00000463455 SH2D4AQ9H788 454 aa14.3□□□□□ -0.12
RTCB-202ENST00000463455 ARPP21Q9UBL0 812 aaPredicted RBP14.3□□□□□ -0.12
RTCB-202ENST00000463455 BIN2Q9UBW5 565 aaPredicted RBP14.3□□□□□ -0.12
RTCB-202ENST00000463455 MYH8P13535 1937 aa14.29□□□□□ -0.12
RTCB-202ENST00000463455 XRCC5P13010 732 aaKnown RBP14.29□□□□□ -0.12
RTCB-202ENST00000463455 CCL5P13501 91 aa14.29□□□□□ -0.12
RTCB-202ENST00000463455 GNAT2P19087 354 aa14.29□□□□□ -0.12
RTCB-202ENST00000463455 VCAM1P19320 739 aa14.29□□□□□ -0.12
RTCB-202ENST00000463455 GUCY1A2P33402 732 aa14.29□□□□□ -0.12
RTCB-202ENST00000463455 ERVK-9P63128 1117 aa14.29□□□□□ -0.12
RTCB-202ENST00000463455 ERVK-24P63145 666 aa14.29□□□□□ -0.12
RTCB-202ENST00000463455 MTFR1Q15390 333 aa14.29□□□□□ -0.12
RTCB-202ENST00000463455 CATSPERGQ6ZRH7 1159 aa14.29□□□□□ -0.12
RTCB-202ENST00000463455 C16orf86Q6ZW13 317 aa14.29□□□□□ -0.12
RTCB-202ENST00000463455 TRMT44Q8IYL2 757 aaKnown RBP14.29□□□□□ -0.12
RTCB-202ENST00000463455 LPAR1Q92633 364 aa14.29□□□□□ -0.12
RTCB-202ENST00000463455 PUS7LQ9H0K6 701 aaKnown RBP14.29□□□□□ -0.12
RTCB-202ENST00000463455 RBPJLQ9UBG7 517 aa14.29□□□□□ -0.12
RTCB-202ENST00000463455 GJD2Q9UKL4 321 aa14.29□□□□□ -0.12
RTCB-202ENST00000463455 RABGAP1Q9Y3P9 1069 aa14.29□□□□□ -0.12
RTCB-202ENST00000463455 SLC4A4Q9Y6R1 1079 aa14.29□□□□□ -0.12
RTCB-202ENST00000463455 BRCA2P51587 3418 aa14.29□□□□□ -0.12
RTCB-202ENST00000463455 BAZ2AQ9UIF9 1905 aaKnown RBP14.29□□□□□ -0.12
RTCB-202ENST00000463455 USP17L12C9JPN9 530 aa14.28□□□□□ -0.12
RTCB-202ENST00000463455 USP17L21D6R901 530 aa14.28□□□□□ -0.12
RTCB-202ENST00000463455 RNF113AO15541 343 aaKnown RBP14.28□□□□□ -0.12
RTCB-202ENST00000463455 PRKAB2O43741 272 aa14.28□□□□□ -0.12
RTCB-202ENST00000463455 HMGCRP04035 888 aa14.28□□□□□ -0.12
RTCB-202ENST00000463455 CCNA1P78396 465 aa14.28□□□□□ -0.12
RTCB-202ENST00000463455 HDAC1Q13547 482 aaPredicted RBP14.28□□□□□ -0.12
RTCB-202ENST00000463455 SEPT2Q15019 361 aa14.28□□□□□ -0.12
RTCB-202ENST00000463455 SBK1Q52WX2 424 aa14.28□□□□□ -0.12
RTCB-202ENST00000463455 TICAM2Q86XR7 235 aa14.28□□□□□ -0.12
RTCB-202ENST00000463455 ACER1Q8TDN7 264 aa14.28□□□□□ -0.12
RTCB-202ENST00000463455 GCC1Q96CN9 775 aa14.28□□□□□ -0.12
RTCB-202ENST00000463455 STRBPQ96SI9 672 aaKnown RBP14.28□□□□□ -0.12
RTCB-202ENST00000463455 RNF208Q9H0X6 261 aa14.28□□□□□ -0.12
RTCB-202ENST00000463455 ARHGEF10LQ9HCE6 1279 aa14.28□□□□□ -0.12
RTCB-202ENST00000463455 TXNRD2Q9NNW7 524 aa14.28□□□□□ -0.12
RTCB-202ENST00000463455 ROBO3Q96MS0 1386 aa14.27□□□□□ -0.12
RTCB-202ENST00000463455 MPHOSPH10O00566 681 aaKnown RBP14.27□□□□□ -0.13
RTCB-202ENST00000463455 INHAP05111 366 aa14.27□□□□□ -0.13
RTCB-202ENST00000463455 CYP2D6P10635 497 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms