RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 DYNLL2Q96FJ2 89 aa15.6■□□□□ 0.09
R3HDM1-213ENST00000463230 MCOLN1Q9GZU1 580 aa15.6■□□□□ 0.09
R3HDM1-213ENST00000463230 KIF22Q14807 665 aa15.59■□□□□ 0.09
R3HDM1-213ENST00000463230 GTF3C2Q8WUA4 911 aaPredicted RBP15.59■□□□□ 0.09
R3HDM1-213ENST00000463230 SH2D4AQ9H788 454 aa15.59■□□□□ 0.09
R3HDM1-213ENST00000463230 GREB1LQ9C091 1923 aaPredicted RBP15.59■□□□□ 0.09
R3HDM1-213ENST00000463230 PCNTO95613 3336 aa15.59■□□□□ 0.09
R3HDM1-213ENST00000463230 CYP2D7A0A087X1C5 515 aa15.59■□□□□ 0.09
R3HDM1-213ENST00000463230 NEFLP07196 543 aa15.59■□□□□ 0.09
R3HDM1-213ENST00000463230 CENPBP07199 599 aaPredicted RBP15.59■□□□□ 0.09
R3HDM1-213ENST00000463230 GUCY1A2P33402 732 aa15.59■□□□□ 0.09
R3HDM1-213ENST00000463230 GCLCP48506 637 aaPredicted RBP15.59■□□□□ 0.09
R3HDM1-213ENST00000463230 RAB3GAP1Q15042 981 aa15.59■□□□□ 0.09
R3HDM1-213ENST00000463230 SLC44A5Q8NCS7 719 aa15.59■□□□□ 0.09
R3HDM1-213ENST00000463230 CCDC171Q6TFL3 1326 aa15.58■□□□□ 0.09
R3HDM1-213ENST00000463230 NMIQ13287 307 aaPredicted RBP15.58■□□□□ 0.08
R3HDM1-213ENST00000463230 FEZ1Q99689 392 aa15.58■□□□□ 0.08
R3HDM1-213ENST00000463230 DIAPH3Q9NSV4 1193 aa15.58■□□□□ 0.08
R3HDM1-213ENST00000463230 A0A0D9SFI3 127 aa15.58■□□□□ 0.08
R3HDM1-213ENST00000463230 MPHOSPH10O00566 681 aaKnown RBP15.58■□□□□ 0.08
R3HDM1-213ENST00000463230 BCRP11274 1271 aa15.58■□□□□ 0.08
R3HDM1-213ENST00000463230 PRMT2P55345 433 aa15.58■□□□□ 0.08
R3HDM1-213ENST00000463230 EVX2Q03828 476 aa15.58■□□□□ 0.08
R3HDM1-213ENST00000463230 SEPT2Q15019 361 aa15.58■□□□□ 0.08
R3HDM1-213ENST00000463230 SHROOM1Q2M3G4 852 aaPredicted RBP15.58■□□□□ 0.08
R3HDM1-213ENST00000463230 IFFO2Q5TF58 517 aa15.58■□□□□ 0.08
R3HDM1-213ENST00000463230 FAM227BQ96M60 508 aa15.58■□□□□ 0.08
R3HDM1-213ENST00000463230 ARHGEF10LQ9HCE6 1279 aa15.58■□□□□ 0.08
R3HDM1-213ENST00000463230 MINDY4BA8MYZ0 360 aa15.57■□□□□ 0.08
R3HDM1-213ENST00000463230 PDE4BQ07343 736 aa15.57■□□□□ 0.08
R3HDM1-213ENST00000463230 TREML2Q5T2D2 321 aa15.57■□□□□ 0.08
R3HDM1-213ENST00000463230 FBXO46Q6PJ61 603 aaPredicted RBP15.57■□□□□ 0.08
R3HDM1-213ENST00000463230 KANSL2Q9H9L4 492 aa15.57■□□□□ 0.08
R3HDM1-213ENST00000463230 ANAPC4Q9UJX5 808 aa15.57■□□□□ 0.08
R3HDM1-213ENST00000463230 AKR1B1P15121 316 aa15.56■□□□□ 0.08
R3HDM1-213ENST00000463230 LACTBP83111 547 aaPredicted RBP15.56■□□□□ 0.08
R3HDM1-213ENST00000463230 PPARAQ07869 468 aa15.56■□□□□ 0.08
R3HDM1-213ENST00000463230 CD99L2Q8TCZ2 262 aa15.56■□□□□ 0.08
R3HDM1-213ENST00000463230 SMCR8Q8TEV9 937 aaPredicted RBP15.56■□□□□ 0.08
R3HDM1-213ENST00000463230 ABHD8Q96I13 439 aa15.56■□□□□ 0.08
R3HDM1-213ENST00000463230 MKNK2Q9HBH9 465 aa15.56■□□□□ 0.08
R3HDM1-213ENST00000463230 EMILIN3Q9NT22 766 aa15.56■□□□□ 0.08
R3HDM1-213ENST00000463230 PLIN4Q96Q06 1357 aa15.56■□□□□ 0.08
R3HDM1-213ENST00000463230 FOXP2O15409 715 aa15.56■□□□□ 0.08
R3HDM1-213ENST00000463230 NT5C2P49902 561 aa15.56■□□□□ 0.08
R3HDM1-213ENST00000463230 IRX3P78415 501 aaPredicted RBP15.56■□□□□ 0.08
R3HDM1-213ENST00000463230 ICA1Q05084 483 aa15.56■□□□□ 0.08
R3HDM1-213ENST00000463230 PPP4R3BQ5MIZ7 849 aa15.56■□□□□ 0.08
R3HDM1-213ENST00000463230 ERICH6BQ5W0A0 696 aa15.56■□□□□ 0.08
R3HDM1-213ENST00000463230 CCDC129Q6ZRS4 1044 aa15.56■□□□□ 0.08
R3HDM1-213ENST00000463230 OTOP1Q7RTM1 612 aa15.56■□□□□ 0.08
R3HDM1-213ENST00000463230 LPAR1Q92633 364 aa15.56■□□□□ 0.08
R3HDM1-213ENST00000463230 ASCC2Q9H1I8 757 aaPredicted RBP15.56■□□□□ 0.08
R3HDM1-213ENST00000463230 EFCC1Q9HA90 598 aa15.56■□□□□ 0.08
R3HDM1-213ENST00000463230 SYNPO2Q9UMS6 1093 aa15.56■□□□□ 0.08
R3HDM1-213ENST00000463230 RAD50Q92878 1312 aa15.56■□□□□ 0.08
R3HDM1-213ENST00000463230 CYP2C8P10632 490 aa15.55■□□□□ 0.08
R3HDM1-213ENST00000463230 RASA1P20936 1047 aa15.55■□□□□ 0.08
R3HDM1-213ENST00000463230 FAM110CQ1W6H9 321 aa15.55■□□□□ 0.08
R3HDM1-213ENST00000463230 CPA4Q9UI42 421 aa15.55■□□□□ 0.08
R3HDM1-213ENST00000463230 USP17L15C9J2P7 530 aa15.55■□□□□ 0.08
R3HDM1-213ENST00000463230 USP17L13C9JLJ4 530 aa15.55■□□□□ 0.08
R3HDM1-213ENST00000463230 USP17L11C9JVI0 530 aa15.55■□□□□ 0.08
R3HDM1-213ENST00000463230 USP17L18D6R9N7 530 aa15.55■□□□□ 0.08
R3HDM1-213ENST00000463230 USP17L22D6RA61 530 aa15.55■□□□□ 0.08
R3HDM1-213ENST00000463230 USP17L17D6RBQ6 530 aa15.55■□□□□ 0.08
R3HDM1-213ENST00000463230 USP17L19D6RCP7 530 aa15.55■□□□□ 0.08
R3HDM1-213ENST00000463230 USP17L20D6RJB6 530 aa15.55■□□□□ 0.08
R3HDM1-213ENST00000463230 PCP11498 1178 aaKnown RBP15.55■□□□□ 0.08
R3HDM1-213ENST00000463230 GSPT1P15170 499 aaKnown RBP15.55■□□□□ 0.08
R3HDM1-213ENST00000463230 USP17L24Q0WX57 530 aa15.55■□□□□ 0.08
R3HDM1-213ENST00000463230 ZNF444Q8N0Y2 327 aaPredicted RBP15.55■□□□□ 0.08
R3HDM1-213ENST00000463230 ACER1Q8TDN7 264 aa15.55■□□□□ 0.08
R3HDM1-213ENST00000463230 TMX2Q9Y320 296 aa15.55■□□□□ 0.08
R3HDM1-213ENST00000463230 TRIM17Q9Y577 477 aa15.55■□□□□ 0.08
R3HDM1-213ENST00000463230 HSPD1P10809 573 aaKnown RBP15.54■□□□□ 0.08
R3HDM1-213ENST00000463230 RUFY2Q8WXA3 655 aa15.54■□□□□ 0.08
R3HDM1-213ENST00000463230 MGAMO43451 1857 aa15.54■□□□□ 0.08
R3HDM1-213ENST00000463230 HOXD10P28358 340 aa15.53■□□□□ 0.08
R3HDM1-213ENST00000463230 NYAP2Q9P242 653 aa15.53■□□□□ 0.08
R3HDM1-213ENST00000463230 MORF4L1Q9UBU8 362 aa15.53■□□□□ 0.08
R3HDM1-213ENST00000463230 SMIM22K7EJ46 135 aa15.53■□□□□ 0.08
R3HDM1-213ENST00000463230 FGRP09769 529 aa15.53■□□□□ 0.08
R3HDM1-213ENST00000463230 VCAM1P19320 739 aa15.53■□□□□ 0.08
R3HDM1-213ENST00000463230 FCGRTP55899 365 aa15.53■□□□□ 0.08
R3HDM1-213ENST00000463230 LBX2Q6XYB7 198 aa15.53■□□□□ 0.08
R3HDM1-213ENST00000463230 ZNF589Q86UQ0 364 aaPredicted RBP15.53■□□□□ 0.08
R3HDM1-213ENST00000463230 DSCC1Q9BVC3 393 aa15.53■□□□□ 0.08
R3HDM1-213ENST00000463230 PTPN22Q9Y2R2 807 aa15.53■□□□□ 0.08
R3HDM1-213ENST00000463230 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.53■□□□□ 0.08
R3HDM1-213ENST00000463230 LAMA4Q16363 1823 aa15.53■□□□□ 0.08
R3HDM1-213ENST00000463230 IGKV6D-41A0A0C4DH26 115 aa15.52■□□□□ 0.08
R3HDM1-213ENST00000463230 ORC4O43929 436 aa15.52■□□□□ 0.08
R3HDM1-213ENST00000463230 VPS53Q5VIR6 699 aa15.52■□□□□ 0.08
R3HDM1-213ENST00000463230 CATSPERGQ6ZRH7 1159 aa15.52■□□□□ 0.08
R3HDM1-213ENST00000463230 NEDD1Q8NHV4 660 aa15.52■□□□□ 0.08
R3HDM1-213ENST00000463230 VCPKMTQ9H867 229 aa15.52■□□□□ 0.08
R3HDM1-213ENST00000463230 GOPCQ9HD26 462 aa15.52■□□□□ 0.08
R3HDM1-213ENST00000463230 A0A1W2PRG0 241 aa15.52■□□□□ 0.07
R3HDM1-213ENST00000463230 FGAP02671 866 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms