RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 BTBD7Q9P203 1132 aa19.22■□□□□ 0.67
SND1-203ENST00000463020 PLCG2P16885 1265 aa19.21■□□□□ 0.67
SND1-203ENST00000463020 CYP7A1P22680 504 aa19.21■□□□□ 0.67
SND1-203ENST00000463020 MAP2K5Q13163 448 aa19.21■□□□□ 0.67
SND1-203ENST00000463020 TATDN1Q6P1N9 297 aa19.21■□□□□ 0.67
SND1-203ENST00000463020 NPLOC4Q8TAT6 608 aa19.21■□□□□ 0.67
SND1-203ENST00000463020 C12orf42Q96LP6 360 aa19.21■□□□□ 0.67
SND1-203ENST00000463020 GUCD1Q96NT3 240 aa19.21■□□□□ 0.67
SND1-203ENST00000463020 ANTXR1Q9H6X2 564 aa19.21■□□□□ 0.67
SND1-203ENST00000463020 GPR108Q9NPR9 543 aa19.21■□□□□ 0.67
SND1-203ENST00000463020 VCAM1P19320 739 aa19.2■□□□□ 0.66
SND1-203ENST00000463020 GUCY1A2P33402 732 aa19.2■□□□□ 0.66
SND1-203ENST00000463020 SSH3Q8TE77 659 aa19.2■□□□□ 0.66
SND1-203ENST00000463020 TRIM34Q9BYJ4 488 aa19.2■□□□□ 0.66
SND1-203ENST00000463020 CCDC8Q9H0W5 538 aaPredicted RBP19.2■□□□□ 0.66
SND1-203ENST00000463020 MYH1P12882 1939 aa19.19■□□□□ 0.66
SND1-203ENST00000463020 IGHA2P01877 340 aa19.19■□□□□ 0.66
SND1-203ENST00000463020 CYP2C19P33261 490 aa19.19■□□□□ 0.66
SND1-203ENST00000463020 ATN1P54259 1190 aaPredicted RBP19.19■□□□□ 0.66
SND1-203ENST00000463020 CCDC158Q5M9N0 1113 aa19.19■□□□□ 0.66
SND1-203ENST00000463020 CATSPERGQ6ZRH7 1159 aa19.19■□□□□ 0.66
SND1-203ENST00000463020 TRMT44Q8IYL2 757 aaKnown RBP19.19■□□□□ 0.66
SND1-203ENST00000463020 EAF2Q96CJ1 260 aaPredicted RBP19.19■□□□□ 0.66
SND1-203ENST00000463020 ZNF512BQ96KM6 892 aaPredicted RBP19.19■□□□□ 0.66
SND1-203ENST00000463020 SENP6Q9GZR1 1112 aaPredicted RBP19.19■□□□□ 0.66
SND1-203ENST00000463020 RABGAP1Q9Y3P9 1069 aa19.19■□□□□ 0.66
SND1-203ENST00000463020 HLA-DOAP06340 250 aa19.18■□□□□ 0.66
SND1-203ENST00000463020 PTPREP23469 700 aa19.18■□□□□ 0.66
SND1-203ENST00000463020 SHMT1P34896 483 aa19.18■□□□□ 0.66
SND1-203ENST00000463020 RAB3GAP1Q15042 981 aa19.18■□□□□ 0.66
SND1-203ENST00000463020 WDR78Q5VTH9 848 aa19.18■□□□□ 0.66
SND1-203ENST00000463020 EDC3Q96F86 508 aaKnown RBP19.18■□□□□ 0.66
SND1-203ENST00000463020 FAM161BQ96MY7 647 aa19.18■□□□□ 0.66
SND1-203ENST00000463020 GINM1Q9NU53 330 aa19.18■□□□□ 0.66
SND1-203ENST00000463020 LTBP2Q14767 1821 aa19.17■□□□□ 0.66
SND1-203ENST00000463020 SPDYE16A6NNV3 312 aaPredicted RBP19.17■□□□□ 0.66
SND1-203ENST00000463020 USP17L15C9J2P7 530 aa19.17■□□□□ 0.66
SND1-203ENST00000463020 USP17L13C9JLJ4 530 aa19.17■□□□□ 0.66
SND1-203ENST00000463020 USP17L11C9JVI0 530 aa19.17■□□□□ 0.66
SND1-203ENST00000463020 USP17L18D6R9N7 530 aa19.17■□□□□ 0.66
SND1-203ENST00000463020 USP17L22D6RA61 530 aa19.17■□□□□ 0.66
SND1-203ENST00000463020 USP17L17D6RBQ6 530 aa19.17■□□□□ 0.66
SND1-203ENST00000463020 USP17L19D6RCP7 530 aa19.17■□□□□ 0.66
SND1-203ENST00000463020 USP17L20D6RJB6 530 aa19.17■□□□□ 0.66
SND1-203ENST00000463020 SURF6O75683 361 aaKnown RBP19.17■□□□□ 0.66
SND1-203ENST00000463020 IDH1O75874 414 aaKnown RBP19.17■□□□□ 0.66
SND1-203ENST00000463020 PLCD1P51178 756 aa19.17■□□□□ 0.66
SND1-203ENST00000463020 ATP8B2P98198 1209 aa19.17■□□□□ 0.66
SND1-203ENST00000463020 USP17L24Q0WX57 530 aa19.17■□□□□ 0.66
SND1-203ENST00000463020 OS9Q13438 667 aaPredicted RBP19.17■□□□□ 0.66
SND1-203ENST00000463020 CCAR1Q8IX12 1150 aaKnown RBP19.17■□□□□ 0.66
SND1-203ENST00000463020 MAGEB6Q8N7X4 407 aa19.17■□□□□ 0.66
SND1-203ENST00000463020 FEZ1Q99689 392 aa19.17■□□□□ 0.66
SND1-203ENST00000463020 DDX20Q9UHI6 824 aaKnown RBP19.17■□□□□ 0.66
SND1-203ENST00000463020 POTEB2H3BUK9 544 aa19.16■□□□□ 0.66
SND1-203ENST00000463020 GRB14Q14449 540 aa19.16■□□□□ 0.66
SND1-203ENST00000463020 KIAA1755Q5JYT7 1200 aa19.16■□□□□ 0.66
SND1-203ENST00000463020 GTF3C2Q8WUA4 911 aaPredicted RBP19.16■□□□□ 0.66
SND1-203ENST00000463020 COL25A1Q9BXS0 654 aaPredicted RBP19.16■□□□□ 0.66
SND1-203ENST00000463020 KIAA1683Q9H0B3 1180 aa19.16■□□□□ 0.66
SND1-203ENST00000463020 RPAP3Q9H6T3 665 aaPredicted RBP19.16■□□□□ 0.66
SND1-203ENST00000463020 A0A1W2PRG0 241 aa19.15■□□□□ 0.66
SND1-203ENST00000463020 SLC15A5A6NIM6 579 aa19.15■□□□□ 0.66
SND1-203ENST00000463020 RLBP1P12271 317 aa19.15■□□□□ 0.66
SND1-203ENST00000463020 USP5P45974 858 aa19.15■□□□□ 0.66
SND1-203ENST00000463020 ANO1Q5XXA6 986 aa19.15■□□□□ 0.66
SND1-203ENST00000463020 EHD4Q9H223 541 aa19.15■□□□□ 0.66
SND1-203ENST00000463020 SERPINB13Q9UIV8 391 aa19.15■□□□□ 0.66
SND1-203ENST00000463020 CCER2I3L3R5 266 aa19.14■□□□□ 0.65
SND1-203ENST00000463020 IPO8O15397 1037 aaKnown RBP19.14■□□□□ 0.65
SND1-203ENST00000463020 HOXC6P09630 235 aa19.14■□□□□ 0.65
SND1-203ENST00000463020 CYBAP13498 195 aa19.14■□□□□ 0.65
SND1-203ENST00000463020 CNGA1P29973 690 aa19.14■□□□□ 0.65
SND1-203ENST00000463020 SEPT2Q15019 361 aa19.14■□□□□ 0.65
SND1-203ENST00000463020 ABCB5Q2M3G0 1257 aa19.14■□□□□ 0.65
SND1-203ENST00000463020 CERKLQ49MI3 558 aaPredicted RBP19.14■□□□□ 0.65
SND1-203ENST00000463020 GJC2Q5T442 439 aaPredicted RBP19.14■□□□□ 0.65
SND1-203ENST00000463020 MFSD14CQ5VZR4 134 aa19.14■□□□□ 0.65
SND1-203ENST00000463020 LBX2Q6XYB7 198 aa19.14■□□□□ 0.65
SND1-203ENST00000463020 RIOK1Q9BRS2 568 aaKnown RBP19.14■□□□□ 0.65
SND1-203ENST00000463020 CWC22Q9HCG8 908 aaKnown RBP19.14■□□□□ 0.65
SND1-203ENST00000463020 NOP58Q9Y2X3 529 aaKnown RBP19.14■□□□□ 0.65
SND1-203ENST00000463020 GTF3C3Q9Y5Q9 886 aa19.14■□□□□ 0.65
SND1-203ENST00000463020 RLFQ13129 1914 aa19.13■□□□□ 0.65
SND1-203ENST00000463020 RTP1P59025 263 aa19.13■□□□□ 0.65
SND1-203ENST00000463020 CLEC10AQ8IUN9 316 aa19.13■□□□□ 0.65
SND1-203ENST00000463020 LPAR1Q92633 364 aa19.13■□□□□ 0.65
SND1-203ENST00000463020 A0A0G2JMZ2 1700 aa19.13■□□□□ 0.65
SND1-203ENST00000463020 SMIM22K7EJ46 135 aa19.12■□□□□ 0.65
SND1-203ENST00000463020 CYP2D6P10635 497 aa19.12■□□□□ 0.65
SND1-203ENST00000463020 ATP2B2Q01814 1243 aa19.12■□□□□ 0.65
SND1-203ENST00000463020 GABPAQ06546 454 aa19.12■□□□□ 0.65
SND1-203ENST00000463020 C9orf50Q5SZB4 431 aa19.12■□□□□ 0.65
SND1-203ENST00000463020 MOV10L1Q9BXT6 1211 aaKnown RBP19.12■□□□□ 0.65
SND1-203ENST00000463020 NAV1Q8NEY1 1877 aa19.11■□□□□ 0.65
SND1-203ENST00000463020 DNM1LO00429 736 aa19.11■□□□□ 0.65
SND1-203ENST00000463020 COBLO75128 1261 aa19.11■□□□□ 0.65
SND1-203ENST00000463020 ADORA2AP29274 412 aa19.11■□□□□ 0.65
SND1-203ENST00000463020 CCNA1P78396 465 aa19.11■□□□□ 0.65
SND1-203ENST00000463020 PRAMEF19Q5SWL8 479 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms