RNA–Protein interactions for RNA: ENST00000461703.6

TNFRSF25-209, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-209ENST00000461703 RBPJLQ9UBG7 517 aa27.42■■□□□ 1.98
TNFRSF25-209ENST00000461703 IRF5Q13568 498 aa27.41■■□□□ 1.98
TNFRSF25-209ENST00000461703 CLEC10AQ8IUN9 316 aa27.41■■□□□ 1.98
TNFRSF25-209ENST00000461703 COA7Q96BR5 231 aa27.41■■□□□ 1.98
TNFRSF25-209ENST00000461703 UNC93B1Q9H1C4 597 aa27.41■■□□□ 1.98
TNFRSF25-209ENST00000461703 CABP5Q9NP86 173 aa27.41■■□□□ 1.98
TNFRSF25-209ENST00000461703 PARP14Q460N5 1801 aa27.41■■□□□ 1.98
TNFRSF25-209ENST00000461703 A0A1W2PRG0 241 aa27.4■■□□□ 1.98
TNFRSF25-209ENST00000461703 MPHOSPH10O00566 681 aaKnown RBP27.4■■□□□ 1.98
TNFRSF25-209ENST00000461703 INHAP05111 366 aa27.4■■□□□ 1.98
TNFRSF25-209ENST00000461703 KIAA1683Q9H0B3 1180 aa27.4■■□□□ 1.98
TNFRSF25-209ENST00000461703 ATP8A2Q9NTI2 1148 aa27.4■■□□□ 1.98
TNFRSF25-209ENST00000461703 SLC4A4Q9Y6R1 1079 aa27.4■■□□□ 1.98
TNFRSF25-209ENST00000461703 VCAM1P19320 739 aa27.39■■□□□ 1.98
TNFRSF25-209ENST00000461703 Q3C1V9 767 aa27.39■■□□□ 1.98
TNFRSF25-209ENST00000461703 KBTBD3Q8NAB2 608 aa27.39■■□□□ 1.98
TNFRSF25-209ENST00000461703 PAGR1Q9BTK6 254 aa27.39■■□□□ 1.98
TNFRSF25-209ENST00000461703 RNF208Q9H0X6 261 aa27.39■■□□□ 1.98
TNFRSF25-209ENST00000461703 GJD2Q9UKL4 321 aa27.39■■□□□ 1.98
TNFRSF25-209ENST00000461703 GREB1LQ9C091 1923 aaPredicted RBP27.38■■□□□ 1.97
TNFRSF25-209ENST00000461703 USP17L12C9JPN9 530 aa27.38■■□□□ 1.97
TNFRSF25-209ENST00000461703 USP17L21D6R901 530 aa27.38■■□□□ 1.97
TNFRSF25-209ENST00000461703 AKR1B1P15121 316 aa27.38■■□□□ 1.97
TNFRSF25-209ENST00000461703 C12orf60Q5U649 245 aa27.38■■□□□ 1.97
TNFRSF25-209ENST00000461703 PXYLP1Q8TE99 480 aa27.38■■□□□ 1.97
TNFRSF25-209ENST00000461703 A0A0G2JMZ2 1700 aa27.37■■□□□ 1.97
TNFRSF25-209ENST00000461703 UBXN2AP68543 259 aa27.37■■□□□ 1.97
TNFRSF25-209ENST00000461703 ZSCAN25Q6NSZ9 544 aa27.37■■□□□ 1.97
TNFRSF25-209ENST00000461703 OSBP2Q969R2 916 aa27.37■■□□□ 1.97
TNFRSF25-209ENST00000461703 GPATCH3Q96I76 525 aa27.37■■□□□ 1.97
TNFRSF25-209ENST00000461703 PORCNQ9H237 461 aa27.37■■□□□ 1.97
TNFRSF25-209ENST00000461703 CNMDO75829 334 aa27.36■■□□□ 1.97
TNFRSF25-209ENST00000461703 ERVK-9P63128 1117 aa27.36■■□□□ 1.97
TNFRSF25-209ENST00000461703 ERVK-24P63145 666 aa27.36■■□□□ 1.97
TNFRSF25-209ENST00000461703 KIAA1755Q5JYT7 1200 aa27.36■■□□□ 1.97
TNFRSF25-209ENST00000461703 GPRC5AQ8NFJ5 357 aa27.36■■□□□ 1.97
TNFRSF25-209ENST00000461703 PI4K2BQ8TCG2 481 aa27.36■■□□□ 1.97
TNFRSF25-209ENST00000461703 STRBPQ96SI9 672 aaKnown RBP27.36■■□□□ 1.97
TNFRSF25-209ENST00000461703 USP17L15C9J2P7 530 aa27.35■■□□□ 1.97
TNFRSF25-209ENST00000461703 USP17L13C9JLJ4 530 aa27.35■■□□□ 1.97
TNFRSF25-209ENST00000461703 USP17L11C9JVI0 530 aa27.35■■□□□ 1.97
TNFRSF25-209ENST00000461703 USP17L18D6R9N7 530 aa27.35■■□□□ 1.97
TNFRSF25-209ENST00000461703 USP17L22D6RA61 530 aa27.35■■□□□ 1.97
TNFRSF25-209ENST00000461703 USP17L17D6RBQ6 530 aa27.35■■□□□ 1.97
TNFRSF25-209ENST00000461703 USP17L19D6RCP7 530 aa27.35■■□□□ 1.97
TNFRSF25-209ENST00000461703 USP17L20D6RJB6 530 aa27.35■■□□□ 1.97
TNFRSF25-209ENST00000461703 GJB1P08034 283 aa27.35■■□□□ 1.97
TNFRSF25-209ENST00000461703 GJA8P48165 433 aa27.35■■□□□ 1.97
TNFRSF25-209ENST00000461703 USP14P54578 494 aa27.35■■□□□ 1.97
TNFRSF25-209ENST00000461703 USP17L24Q0WX57 530 aa27.35■■□□□ 1.97
TNFRSF25-209ENST00000461703 TRIM32Q13049 653 aa27.35■■□□□ 1.97
TNFRSF25-209ENST00000461703 CTR9Q6PD62 1173 aa27.35■■□□□ 1.97
TNFRSF25-209ENST00000461703 CATSPERGQ6ZRH7 1159 aa27.35■■□□□ 1.97
TNFRSF25-209ENST00000461703 SIAH1Q8IUQ4 282 aa27.35■■□□□ 1.97
TNFRSF25-209ENST00000461703 SWAP70Q9UH65 585 aa27.35■■□□□ 1.97
TNFRSF25-209ENST00000461703 CDK8P49336 464 aa27.34■■□□□ 1.97
TNFRSF25-209ENST00000461703 RPAP3Q9H6T3 665 aaPredicted RBP27.34■■□□□ 1.97
TNFRSF25-209ENST00000461703 COL11A1P12107 1806 aaPredicted RBP27.33■■□□□ 1.97
TNFRSF25-209ENST00000461703 M0R2C6 588 aa27.33■■□□□ 1.97
TNFRSF25-209ENST00000461703 RNF113AO15541 343 aaKnown RBP27.33■■□□□ 1.97
TNFRSF25-209ENST00000461703 TMEM179Q6ZVK1 233 aa27.33■■□□□ 1.97
TNFRSF25-209ENST00000461703 C16orf86Q6ZW13 317 aa27.33■■□□□ 1.97
TNFRSF25-209ENST00000461703 APPBP2Q92624 585 aa27.33■■□□□ 1.97
TNFRSF25-209ENST00000461703 SALL3Q9BXA9 1300 aa27.33■■□□□ 1.97
TNFRSF25-209ENST00000461703 GSG1L2A8MUP6 293 aa27.32■■□□□ 1.96
TNFRSF25-209ENST00000461703 U2AF1L4Q8WU68 220 aaKnown RBP27.32■■□□□ 1.96
TNFRSF25-209ENST00000461703 EPB41L4AQ9HCS5 686 aaPredicted RBP27.32■■□□□ 1.96
TNFRSF25-209ENST00000461703 TTC41PQ6P2S7 1318 aa27.32■■□□□ 1.96
TNFRSF25-209ENST00000461703 SPDYE16A6NNV3 312 aaPredicted RBP27.31■■□□□ 1.96
TNFRSF25-209ENST00000461703 CYP2B6P20813 491 aa27.31■■□□□ 1.96
TNFRSF25-209ENST00000461703 STK11IPQ8N1F8 1099 aa27.31■■□□□ 1.96
TNFRSF25-209ENST00000461703 TRIB2Q92519 343 aa27.31■■□□□ 1.96
TNFRSF25-209ENST00000461703 BTBD7Q9P203 1132 aa27.31■■□□□ 1.96
TNFRSF25-209ENST00000461703 ALPK3Q96L96 1907 aa27.31■■□□□ 1.96
TNFRSF25-209ENST00000461703 GPAA1O43292 621 aa27.3■■□□□ 1.96
TNFRSF25-209ENST00000461703 UBE2Q1Q7Z7E8 422 aa27.3■■□□□ 1.96
TNFRSF25-209ENST00000461703 SEC62Q99442 399 aaKnown RBP27.3■■□□□ 1.96
TNFRSF25-209ENST00000461703 MYH4Q9Y623 1939 aa27.29■■□□□ 1.96
TNFRSF25-209ENST00000461703 MX1P20591 662 aa27.29■■□□□ 1.96
TNFRSF25-209ENST00000461703 ICA1Q05084 483 aa27.29■■□□□ 1.96
TNFRSF25-209ENST00000461703 GPR142Q7Z601 462 aa27.29■■□□□ 1.96
TNFRSF25-209ENST00000461703 GTF3C2Q8WUA4 911 aaPredicted RBP27.29■■□□□ 1.96
TNFRSF25-209ENST00000461703 DDRGK1Q96HY6 314 aa27.29■■□□□ 1.96
TNFRSF25-209ENST00000461703 DEFB118Q96PH6 123 aa27.29■■□□□ 1.96
TNFRSF25-209ENST00000461703 PAK6Q9NQU5 681 aaPredicted RBP27.29■■□□□ 1.96
TNFRSF25-209ENST00000461703 RABGAP1Q9Y3P9 1069 aa27.29■■□□□ 1.96
TNFRSF25-209ENST00000461703 FRMPD3Q5JV73 1810 aa27.28■■□□□ 1.96
TNFRSF25-209ENST00000461703 SGPL1O95470 568 aa27.28■■□□□ 1.96
TNFRSF25-209ENST00000461703 HMGCRP04035 888 aa27.28■■□□□ 1.96
TNFRSF25-209ENST00000461703 MAPK4P31152 587 aa27.28■■□□□ 1.96
TNFRSF25-209ENST00000461703 AMOTL1Q8IY63 956 aa27.28■■□□□ 1.96
TNFRSF25-209ENST00000461703 SPICE1Q8N0Z3 855 aa27.28■■□□□ 1.96
TNFRSF25-209ENST00000461703 NKX2-3Q8TAU0 364 aa27.28■■□□□ 1.96
TNFRSF25-209ENST00000461703 ARPP21Q9UBL0 812 aaPredicted RBP27.28■■□□□ 1.96
TNFRSF25-209ENST00000461703 GLRX3O76003 335 aaKnown RBP27.27■■□□□ 1.96
TNFRSF25-209ENST00000461703 ANKRD45Q5TZF3 282 aa27.27■■□□□ 1.96
TNFRSF25-209ENST00000461703 LBX2Q6XYB7 198 aa27.27■■□□□ 1.96
TNFRSF25-209ENST00000461703 USP6NLQ92738 828 aa27.27■■□□□ 1.96
TNFRSF25-209ENST00000461703 NUDT12Q9BQG2 462 aa27.27■■□□□ 1.96
TNFRSF25-209ENST00000461703 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms