RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 LPIN3Q9BQK8 851 aa7.46□□□□□ -1.22
SPTA1-202ENST00000461624 TAOK3Q9H2K8 898 aa7.46□□□□□ -1.22
SPTA1-202ENST00000461624 TERF2IPQ9NYB0 399 aa7.46□□□□□ -1.22
SPTA1-202ENST00000461624 ABT1Q9ULW3 272 aaKnown RBP7.46□□□□□ -1.22
SPTA1-202ENST00000461624 SOS1Q07889 1333 aaPredicted RBP7.46□□□□□ -1.22
SPTA1-202ENST00000461624 MICAL2O94851 1124 aa7.45□□□□□ -1.22
SPTA1-202ENST00000461624 CPB1P15086 417 aa7.45□□□□□ -1.22
SPTA1-202ENST00000461624 FXR1P51114 621 aaKnown RBP eCLIP7.45□□□□□ -1.22
SPTA1-202ENST00000461624 HACL1Q9UJ83 578 aa7.45□□□□□ -1.22
SPTA1-202ENST00000461624 SPG7Q9UQ90 795 aa7.45□□□□□ -1.22
SPTA1-202ENST00000461624 ERVV-2B6SEH9 535 aa7.44□□□□□ -1.22
SPTA1-202ENST00000461624 H0YIN7 160 aa7.44□□□□□ -1.22
SPTA1-202ENST00000461624 EGFRP00533 1210 aa7.44□□□□□ -1.22
SPTA1-202ENST00000461624 RARAP10276 462 aa7.44□□□□□ -1.22
SPTA1-202ENST00000461624 EPHX2P34913 555 aa7.44□□□□□ -1.22
SPTA1-202ENST00000461624 EAPPQ56P03 285 aaPredicted RBP7.44□□□□□ -1.22
SPTA1-202ENST00000461624 USPL1Q5W0Q7 1092 aa7.44□□□□□ -1.22
SPTA1-202ENST00000461624 PNMA8AQ86V59 439 aaPredicted RBP7.44□□□□□ -1.22
SPTA1-202ENST00000461624 DMRTC2Q8IXT2 367 aaPredicted RBP7.44□□□□□ -1.22
SPTA1-202ENST00000461624 IFNL2Q8IZJ0 200 aa7.44□□□□□ -1.22
SPTA1-202ENST00000461624 TMC1Q8TDI8 760 aa7.44□□□□□ -1.22
SPTA1-202ENST00000461624 GCC1Q96CN9 775 aa7.44□□□□□ -1.22
SPTA1-202ENST00000461624 PUS7Q96PZ0 661 aaKnown RBP7.44□□□□□ -1.22
SPTA1-202ENST00000461624 ZFATQ9P243 1243 aa7.44□□□□□ -1.22
SPTA1-202ENST00000461624 ZMIZ1Q9ULJ6 1067 aa7.44□□□□□ -1.22
SPTA1-202ENST00000461624 KIAA0100Q14667 2235 aaKnown RBP7.44□□□□□ -1.22
SPTA1-202ENST00000461624 COL4A5P29400 1685 aa7.44□□□□□ -1.22
SPTA1-202ENST00000461624 SCN7AQ01118 1682 aa7.44□□□□□ -1.22
SPTA1-202ENST00000461624 ROCK2O75116 1388 aaKnown RBP7.44□□□□□ -1.22
SPTA1-202ENST00000461624 SNED1Q8TER0 1413 aa7.44□□□□□ -1.22
SPTA1-202ENST00000461624 VCANP13611 3396 aa7.43□□□□□ -1.22
SPTA1-202ENST00000461624 SCN11AQ9UI33 1791 aa7.43□□□□□ -1.22
SPTA1-202ENST00000461624 KIF20BQ96Q89 1820 aa7.43□□□□□ -1.22
SPTA1-202ENST00000461624 SERPINB2P05120 415 aa7.43□□□□□ -1.22
SPTA1-202ENST00000461624 NRLP54845 237 aa7.43□□□□□ -1.22
SPTA1-202ENST00000461624 GRIK5Q16478 980 aa7.43□□□□□ -1.22
SPTA1-202ENST00000461624 PRSS36Q5K4E3 855 aa7.43□□□□□ -1.22
SPTA1-202ENST00000461624 PERM1Q5SV97 790 aa7.43□□□□□ -1.22
SPTA1-202ENST00000461624 ELMSAN1Q6PJG2 1045 aa7.43□□□□□ -1.22
SPTA1-202ENST00000461624 SHISA2Q6UWI4 295 aa7.43□□□□□ -1.22
SPTA1-202ENST00000461624 KRT25Q7Z3Z0 450 aa7.43□□□□□ -1.22
SPTA1-202ENST00000461624 IFT43Q96FT9 208 aa7.43□□□□□ -1.22
SPTA1-202ENST00000461624 KRTAP9-2Q9BYQ4 174 aa7.43□□□□□ -1.22
SPTA1-202ENST00000461624 NARFQ9UHQ1 456 aa7.43□□□□□ -1.22
SPTA1-202ENST00000461624 RNF123Q5XPI4 1314 aa7.43□□□□□ -1.22
SPTA1-202ENST00000461624 SPTBN5Q9NRC6 3674 aaKnown RBP7.43□□□□□ -1.22
SPTA1-202ENST00000461624 SCO2A0A1W2PP80 73 aa7.42□□□□□ -1.22
SPTA1-202ENST00000461624 ZBTB42B2RXF5 422 aa7.42□□□□□ -1.22
SPTA1-202ENST00000461624 FYB1O15117 783 aa7.42□□□□□ -1.22
SPTA1-202ENST00000461624 TARSP26639 723 aaKnown RBP7.42□□□□□ -1.22
SPTA1-202ENST00000461624 FOXD4L6Q3SYB3 417 aaPredicted RBP7.42□□□□□ -1.22
SPTA1-202ENST00000461624 FOXD4L3Q6VB84 417 aaPredicted RBP7.42□□□□□ -1.22
SPTA1-202ENST00000461624 SAPCD2Q86UD0 394 aa7.42□□□□□ -1.22
SPTA1-202ENST00000461624 FBXO11Q86XK2 927 aa7.42□□□□□ -1.22
SPTA1-202ENST00000461624 WFDC8Q8IUA0 241 aa7.42□□□□□ -1.22
SPTA1-202ENST00000461624 STK32AQ8WU08 396 aa7.42□□□□□ -1.22
SPTA1-202ENST00000461624 HHIPL1Q96JK4 782 aa7.42□□□□□ -1.22
SPTA1-202ENST00000461624 USTQ9Y2C2 406 aa7.42□□□□□ -1.22
SPTA1-202ENST00000461624 COL15A1P39059 1388 aa7.42□□□□□ -1.22
SPTA1-202ENST00000461624 KRTAP9-6A0A140TA67 174 aa7.41□□□□□ -1.22
SPTA1-202ENST00000461624 FZD9O00144 591 aa7.41□□□□□ -1.22
SPTA1-202ENST00000461624 TRAF5O00463 557 aa7.41□□□□□ -1.22
SPTA1-202ENST00000461624 SASH3O75995 380 aa7.41□□□□□ -1.22
SPTA1-202ENST00000461624 TMEM164Q5U3C3 297 aa7.41□□□□□ -1.22
SPTA1-202ENST00000461624 CIAPIN1Q6FI81 312 aa7.41□□□□□ -1.22
SPTA1-202ENST00000461624 PRPF40BQ6NWY9 871 aaKnown RBP7.41□□□□□ -1.22
SPTA1-202ENST00000461624 SSBP4Q9BWG4 385 aaPredicted RBP7.41□□□□□ -1.22
SPTA1-202ENST00000461624 BRIP1Q9BX63 1249 aa7.41□□□□□ -1.22
SPTA1-202ENST00000461624 TTC28Q96AY4 2481 aa7.41□□□□□ -1.22
SPTA1-202ENST00000461624 OPLAHO14841 1288 aa7.4□□□□□ -1.22
SPTA1-202ENST00000461624 PTCD1O75127 700 aaKnown RBP7.4□□□□□ -1.22
SPTA1-202ENST00000461624 HOXD8P13378 290 aaPredicted RBP7.4□□□□□ -1.22
SPTA1-202ENST00000461624 GRM1Q13255 1194 aa7.4□□□□□ -1.22
SPTA1-202ENST00000461624 ARTNQ5T4W7 220 aa7.4□□□□□ -1.22
SPTA1-202ENST00000461624 KRTAP1-3Q8IUG1 177 aa7.4□□□□□ -1.22
SPTA1-202ENST00000461624 TP53INP1Q96A56 240 aa7.4□□□□□ -1.22
SPTA1-202ENST00000461624 GGNBP2Q9H3C7 697 aa7.4□□□□□ -1.22
SPTA1-202ENST00000461624 TLR7Q9NYK1 1049 aaKnown RBP7.4□□□□□ -1.22
SPTA1-202ENST00000461624 LRFN2Q9ULH4 789 aa7.4□□□□□ -1.22
SPTA1-202ENST00000461624 DLL1O00548 723 aa7.39□□□□□ -1.23
SPTA1-202ENST00000461624 XYLBO75191 536 aa7.39□□□□□ -1.23
SPTA1-202ENST00000461624 SOX18P35713 384 aa7.39□□□□□ -1.23
SPTA1-202ENST00000461624 FKBP5Q13451 457 aaPredicted RBP7.39□□□□□ -1.23
SPTA1-202ENST00000461624 STYK1Q6J9G0 422 aa7.39□□□□□ -1.23
SPTA1-202ENST00000461624 PRR5LQ6MZQ0 368 aa7.39□□□□□ -1.23
SPTA1-202ENST00000461624 TREML1Q86YW5 311 aa7.39□□□□□ -1.23
SPTA1-202ENST00000461624 GPC2Q8N158 579 aa7.39□□□□□ -1.23
SPTA1-202ENST00000461624 CLP1Q92989 425 aaKnown RBP7.39□□□□□ -1.23
SPTA1-202ENST00000461624 ZNF622Q969S3 477 aaKnown RBP eCLIP7.39□□□□□ -1.234e-14■■□□□ 13.3
SPTA1-202ENST00000461624 AKAP11Q9UKA4 1901 aa7.39□□□□□ -1.23
SPTA1-202ENST00000461624 UBR2Q8IWV8 1755 aa7.38□□□□□ -1.23
SPTA1-202ENST00000461624 MRC1P22897 1456 aa7.38□□□□□ -1.23
SPTA1-202ENST00000461624 WASHC2AQ641Q2 1341 aa7.38□□□□□ -1.23
SPTA1-202ENST00000461624 SRGNP10124 158 aa7.38□□□□□ -1.23
SPTA1-202ENST00000461624 CYP19A1P11511 503 aaPredicted RBP7.38□□□□□ -1.23
SPTA1-202ENST00000461624 EIF2AK2P19525 551 aaKnown RBP7.38□□□□□ -1.23
SPTA1-202ENST00000461624 PDE6BP35913 854 aa7.38□□□□□ -1.23
SPTA1-202ENST00000461624 FKBP4Q02790 459 aaKnown RBP eCLIP7.38□□□□□ -1.23
SPTA1-202ENST00000461624 PLAURQ03405 335 aa7.38□□□□□ -1.23
SPTA1-202ENST00000461624 SOGA3Q5TF21 947 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms