RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 LRCH3Q96II8 777 aa10.65□□□□□ -0.7
HDAC9-220ENST00000461409 TRIM47Q96LD4 638 aa10.65□□□□□ -0.7
HDAC9-220ENST00000461409 TBC1D2Q9BYX2 928 aa10.65□□□□□ -0.7
HDAC9-220ENST00000461409 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.65□□□□□ -0.7
HDAC9-220ENST00000461409 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.65□□□□□ -0.7
HDAC9-220ENST00000461409 SRRDQ9UH36 339 aa10.65□□□□□ -0.7
HDAC9-220ENST00000461409 FPGT-TNNI3KV9GXZ4 949 aa10.65□□□□□ -0.7
HDAC9-220ENST00000461409 TRIM75PA6NK02 468 aa10.64□□□□□ -0.71
HDAC9-220ENST00000461409 CYP2C8P10632 490 aa10.64□□□□□ -0.71
HDAC9-220ENST00000461409 BCRP11274 1271 aa10.64□□□□□ -0.71
HDAC9-220ENST00000461409 GADL1Q6ZQY3 521 aa10.64□□□□□ -0.71
HDAC9-220ENST00000461409 SMCR8Q8TEV9 937 aaPredicted RBP10.64□□□□□ -0.71
HDAC9-220ENST00000461409 SH3TC2Q8TF17 1288 aa10.64□□□□□ -0.71
HDAC9-220ENST00000461409 ZNF512BQ96KM6 892 aaPredicted RBP10.64□□□□□ -0.71
HDAC9-220ENST00000461409 OSBPL5Q9H0X9 879 aaPredicted RBP10.64□□□□□ -0.71
HDAC9-220ENST00000461409 HERC5Q9UII4 1024 aaKnown RBP10.64□□□□□ -0.71
HDAC9-220ENST00000461409 NOP58Q9Y2X3 529 aaKnown RBP10.64□□□□□ -0.71
HDAC9-220ENST00000461409 MYPNQ86TC9 1320 aa10.63□□□□□ -0.71
HDAC9-220ENST00000461409 GRK4P32298 578 aa10.63□□□□□ -0.71
HDAC9-220ENST00000461409 DBNDD2Q9BQY9 259 aa10.63□□□□□ -0.71
HDAC9-220ENST00000461409 DHX36Q9H2U1 1008 aaKnown RBP10.63□□□□□ -0.71
HDAC9-220ENST00000461409 PI4KBQ9UBF8 816 aa10.63□□□□□ -0.71
HDAC9-220ENST00000461409 AGTPBP1Q9UPW5 1226 aa10.63□□□□□ -0.71
HDAC9-220ENST00000461409 ZBED9Q6R2W3 1325 aa10.62□□□□□ -0.71
HDAC9-220ENST00000461409 DOCK1Q14185 1865 aa10.62□□□□□ -0.71
HDAC9-220ENST00000461409 ZBTB7BO15156 539 aaPredicted RBP10.62□□□□□ -0.71
HDAC9-220ENST00000461409 MYCP01106 439 aaPredicted RBP10.62□□□□□ -0.71
HDAC9-220ENST00000461409 CTGFP29279 349 aa10.62□□□□□ -0.71
HDAC9-220ENST00000461409 PABPC4Q13310 644 aaKnown RBP eCLIP10.62□□□□□ -0.71
HDAC9-220ENST00000461409 DIEXFQ68CQ4 756 aaKnown RBP10.62□□□□□ -0.71
HDAC9-220ENST00000461409 SMYD5Q6GMV2 418 aa10.62□□□□□ -0.71
HDAC9-220ENST00000461409 CERS3Q8IU89 383 aa10.62□□□□□ -0.71
HDAC9-220ENST00000461409 ERC1Q8IUD2 1116 aa10.62□□□□□ -0.71
HDAC9-220ENST00000461409 PROCA1Q8NCQ7 364 aaPredicted RBP10.62□□□□□ -0.71
HDAC9-220ENST00000461409 ZNF280CQ8ND82 737 aa10.62□□□□□ -0.71
HDAC9-220ENST00000461409 NKX2-3Q8TAU0 364 aa10.62□□□□□ -0.71
HDAC9-220ENST00000461409 SH3RF3Q8TEJ3 882 aaPredicted RBP10.62□□□□□ -0.71
HDAC9-220ENST00000461409 C1orf115Q9H7X2 142 aa10.62□□□□□ -0.71
HDAC9-220ENST00000461409 SNRKQ9NRH2 765 aa10.62□□□□□ -0.71
HDAC9-220ENST00000461409 BIN2Q9UBW5 565 aaPredicted RBP10.62□□□□□ -0.71
HDAC9-220ENST00000461409 TSR3Q9UJK0 312 aaKnown RBP10.62□□□□□ -0.71
HDAC9-220ENST00000461409 FAM196BA6NMK8 535 aa10.61□□□□□ -0.71
HDAC9-220ENST00000461409 USP17L5A8MUK1 530 aa10.61□□□□□ -0.71
HDAC9-220ENST00000461409 CYP2E1P05181 493 aaPredicted RBP10.61□□□□□ -0.71
HDAC9-220ENST00000461409 MS4A1P11836 297 aa10.61□□□□□ -0.71
HDAC9-220ENST00000461409 RLBP1P12271 317 aa10.61□□□□□ -0.71
HDAC9-220ENST00000461409 CAP2P40123 477 aa10.61□□□□□ -0.71
HDAC9-220ENST00000461409 PPP4CP60510 307 aa10.61□□□□□ -0.71
HDAC9-220ENST00000461409 UBXN2AP68543 259 aa10.61□□□□□ -0.71
HDAC9-220ENST00000461409 PRKCZQ05513 592 aa10.61□□□□□ -0.71
HDAC9-220ENST00000461409 SPP2Q13103 211 aa10.61□□□□□ -0.71
HDAC9-220ENST00000461409 TMED8Q6PL24 325 aaPredicted RBP10.61□□□□□ -0.71
HDAC9-220ENST00000461409 NYAP1Q6ZVC0 841 aa10.61□□□□□ -0.71
HDAC9-220ENST00000461409 TRIM34Q9BYJ4 488 aa10.61□□□□□ -0.71
HDAC9-220ENST00000461409 AS3MTQ9HBK9 375 aa10.61□□□□□ -0.71
HDAC9-220ENST00000461409 AATFQ9NY61 560 aaKnown RBP eCLIP10.61□□□□□ -0.71
HDAC9-220ENST00000461409 DBNLQ9UJU6 430 aaKnown RBP10.61□□□□□ -0.71
HDAC9-220ENST00000461409 MAST2Q6P0Q8 1798 aa10.6□□□□□ -0.71
HDAC9-220ENST00000461409 TNPO2O14787 897 aaKnown RBP10.6□□□□□ -0.71
HDAC9-220ENST00000461409 ASNSP08243 561 aa10.6□□□□□ -0.71
HDAC9-220ENST00000461409 SLURP2P0DP57 97 aa10.6□□□□□ -0.71
HDAC9-220ENST00000461409 GCLCP48506 637 aaPredicted RBP10.6□□□□□ -0.71
HDAC9-220ENST00000461409 FAM110CQ1W6H9 321 aa10.6□□□□□ -0.71
HDAC9-220ENST00000461409 HSP90AB4PQ58FF6 505 aa10.6□□□□□ -0.71
HDAC9-220ENST00000461409 CEP85Q6P2H3 762 aa10.6□□□□□ -0.71
HDAC9-220ENST00000461409 FOXP4Q8IVH2 680 aaPredicted RBP10.6□□□□□ -0.71
HDAC9-220ENST00000461409 CRACR2BQ8N4Y2 399 aaPredicted RBP10.6□□□□□ -0.71
HDAC9-220ENST00000461409 TGFBRAP1Q8WUH2 860 aa10.6□□□□□ -0.71
HDAC9-220ENST00000461409 GINM1Q9NU53 330 aa10.6□□□□□ -0.71
HDAC9-220ENST00000461409 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.6□□□□□ -0.71
HDAC9-220ENST00000461409 ZSWIM8A7E2V4 1837 aa10.6□□□□□ -0.71
HDAC9-220ENST00000461409 FLT1P17948 1338 aa10.59□□□□□ -0.71
HDAC9-220ENST00000461409 GPR37O15354 613 aa10.59□□□□□ -0.71
HDAC9-220ENST00000461409 ADCY3O60266 1144 aa10.59□□□□□ -0.71
HDAC9-220ENST00000461409 IDH1O75874 414 aaKnown RBP10.59□□□□□ -0.71
HDAC9-220ENST00000461409 HLA-DOAP06340 250 aa10.59□□□□□ -0.71
HDAC9-220ENST00000461409 GJB1P08034 283 aa10.59□□□□□ -0.71
HDAC9-220ENST00000461409 CCL5P13501 91 aa10.59□□□□□ -0.71
HDAC9-220ENST00000461409 ZAP70P43403 619 aa10.59□□□□□ -0.71
HDAC9-220ENST00000461409 HMGCS2P54868 508 aa10.59□□□□□ -0.71
HDAC9-220ENST00000461409 IRF5Q13568 498 aa10.59□□□□□ -0.71
HDAC9-220ENST00000461409 MTFR1Q15390 333 aa10.59□□□□□ -0.71
HDAC9-220ENST00000461409 TREML2Q5T2D2 321 aa10.59□□□□□ -0.71
HDAC9-220ENST00000461409 CCDC84Q86UT8 332 aaPredicted RBP10.59□□□□□ -0.71
HDAC9-220ENST00000461409 METTL16Q86W50 562 aaKnown RBP10.59□□□□□ -0.71
HDAC9-220ENST00000461409 MAPKAPK5Q8IW41 473 aa10.59□□□□□ -0.71
HDAC9-220ENST00000461409 ANKRD13CQ8N6S4 541 aa10.59□□□□□ -0.71
HDAC9-220ENST00000461409 COA7Q96BR5 231 aa10.59□□□□□ -0.71
HDAC9-220ENST00000461409 EAF2Q96CJ1 260 aaPredicted RBP10.59□□□□□ -0.71
HDAC9-220ENST00000461409 WDR18Q9BV38 432 aa10.59□□□□□ -0.71
HDAC9-220ENST00000461409 RNF208Q9H0X6 261 aa10.59□□□□□ -0.71
HDAC9-220ENST00000461409 PIH1D3Q9NQM4 214 aaKnown RBP10.59□□□□□ -0.71
HDAC9-220ENST00000461409 CAPN2P17655 700 aa10.58□□□□□ -0.72
HDAC9-220ENST00000461409 CYP7A1P22680 504 aa10.58□□□□□ -0.72
HDAC9-220ENST00000461409 GJA8P48165 433 aa10.58□□□□□ -0.72
HDAC9-220ENST00000461409 FLT3LGP49771 235 aa10.58□□□□□ -0.72
HDAC9-220ENST00000461409 MAP3K12Q12852 859 aa10.58□□□□□ -0.72
HDAC9-220ENST00000461409 SH3D19Q5HYK7 790 aa10.58□□□□□ -0.72
HDAC9-220ENST00000461409 ADGRA1Q86SQ6 560 aa10.58□□□□□ -0.72
HDAC9-220ENST00000461409 AACSQ86V21 672 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms