RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 CDC27P30260 824 aa12.88□□□□□ -0.35
COPS7B-217ENST00000461350 METAP2P50579 478 aaKnown RBP eCLIP12.88□□□□□ -0.35
COPS7B-217ENST00000461350 TBC1D22AQ8WUA7 517 aa12.88□□□□□ -0.35
COPS7B-217ENST00000461350 DYNLL2Q96FJ2 89 aa12.88□□□□□ -0.35
COPS7B-217ENST00000461350 GJB4Q9NTQ9 266 aa12.88□□□□□ -0.35
COPS7B-217ENST00000461350 SLFN14P0C7P3 912 aa12.88□□□□□ -0.35
COPS7B-217ENST00000461350 GSDMDP57764 484 aa12.88□□□□□ -0.35
COPS7B-217ENST00000461350 SNW1Q13573 536 aaKnown RBP12.88□□□□□ -0.35
COPS7B-217ENST00000461350 FAM47AQ5JRC9 791 aa12.88□□□□□ -0.35
COPS7B-217ENST00000461350 ZBTB43O43298 467 aa12.87□□□□□ -0.35
COPS7B-217ENST00000461350 AOC3Q16853 763 aa12.87□□□□□ -0.35
COPS7B-217ENST00000461350 OTUD7BQ6GQQ9 843 aa12.87□□□□□ -0.35
COPS7B-217ENST00000461350 C7orf43Q8WVR3 580 aa12.87□□□□□ -0.35
COPS7B-217ENST00000461350 ESR2Q92731 530 aa12.87□□□□□ -0.35
COPS7B-217ENST00000461350 UBAC1Q9BSL1 405 aa12.87□□□□□ -0.35
COPS7B-217ENST00000461350 TTF2Q9UNY4 1162 aaKnown RBP12.87□□□□□ -0.35
COPS7B-217ENST00000461350 SLC12A7Q9Y666 1083 aa12.87□□□□□ -0.35
COPS7B-217ENST00000461350 NMT2O60551 498 aa12.87□□□□□ -0.35
COPS7B-217ENST00000461350 WTAPQ15007 396 aa12.87□□□□□ -0.35
COPS7B-217ENST00000461350 SF3A1Q15459 793 aaKnown RBP12.87□□□□□ -0.35
COPS7B-217ENST00000461350 TEX11Q8IYF3 940 aa12.87□□□□□ -0.35
COPS7B-217ENST00000461350 PHKBQ93100 1093 aa12.87□□□□□ -0.35
COPS7B-217ENST00000461350 EYA3Q99504 573 aa12.87□□□□□ -0.35
COPS7B-217ENST00000461350 MKRN1Q9UHC7 482 aaKnown RBP12.87□□□□□ -0.35
COPS7B-217ENST00000461350 TNKSO95271 1327 aa12.87□□□□□ -0.35
COPS7B-217ENST00000461350 KIF2AO00139 706 aaPredicted RBP12.87□□□□□ -0.35
COPS7B-217ENST00000461350 DPEP1P16444 411 aa12.87□□□□□ -0.35
COPS7B-217ENST00000461350 PPP4CP60510 307 aa12.87□□□□□ -0.35
COPS7B-217ENST00000461350 DAGLAQ9Y4D2 1042 aa12.87□□□□□ -0.35
COPS7B-217ENST00000461350 GPR75-ASB3A0A0A6YYF3 556 aa12.86□□□□□ -0.35
COPS7B-217ENST00000461350 ERICH2A1L162 156 aa12.86□□□□□ -0.35
COPS7B-217ENST00000461350 GOLGA8AA7E2F4 631 aa12.86□□□□□ -0.35
COPS7B-217ENST00000461350 UBE2Q2LH0YL09 131 aa12.86□□□□□ -0.35
COPS7B-217ENST00000461350 PLCD1P51178 756 aa12.86□□□□□ -0.35
COPS7B-217ENST00000461350 SART3Q15020 963 aaKnown RBP12.86□□□□□ -0.35
COPS7B-217ENST00000461350 TERF2Q15554 542 aa12.86□□□□□ -0.35
COPS7B-217ENST00000461350 TAF3Q5VWG9 929 aa12.86□□□□□ -0.35
COPS7B-217ENST00000461350 TMC6Q7Z403 805 aa12.86□□□□□ -0.35
COPS7B-217ENST00000461350 SGMS1Q86VZ5 419 aa12.86□□□□□ -0.35
COPS7B-217ENST00000461350 CMTR1Q8N1G2 835 aaKnown RBP12.86□□□□□ -0.35
COPS7B-217ENST00000461350 CCDC82Q8N4S0 544 aa12.86□□□□□ -0.35
COPS7B-217ENST00000461350 SLC44A5Q8NCS7 719 aa12.86□□□□□ -0.35
COPS7B-217ENST00000461350 ORC3Q9UBD5 711 aaPredicted RBP12.86□□□□□ -0.35
COPS7B-217ENST00000461350 ARPP21Q9UBL0 812 aaPredicted RBP12.86□□□□□ -0.35
COPS7B-217ENST00000461350 SCN9AQ15858 1988 aa12.86□□□□□ -0.35
COPS7B-217ENST00000461350 A0A1B0GVL5 298 aa12.86□□□□□ -0.35
COPS7B-217ENST00000461350 LIFRP42702 1097 aa12.86□□□□□ -0.35
COPS7B-217ENST00000461350 ENGASEQ8NFI3 743 aa12.86□□□□□ -0.35
COPS7B-217ENST00000461350 NUP133Q8WUM0 1156 aa12.86□□□□□ -0.35
COPS7B-217ENST00000461350 MRPS27Q92552 414 aaKnown RBP12.86□□□□□ -0.35
COPS7B-217ENST00000461350 AIFM3Q96NN9 605 aa12.86□□□□□ -0.35
COPS7B-217ENST00000461350 KIAA1551Q9HCM1 1747 aa12.86□□□□□ -0.35
COPS7B-217ENST00000461350 ECE2O60344 883 aa12.86□□□□□ -0.35
COPS7B-217ENST00000461350 RHBDL3P58872 404 aa12.86□□□□□ -0.35
COPS7B-217ENST00000461350 ENAHQ8N8S7 591 aaPredicted RBP12.86□□□□□ -0.35
COPS7B-217ENST00000461350 FAM217BQ9NTX9 383 aaPredicted RBP12.86□□□□□ -0.35
COPS7B-217ENST00000461350 PPP1R1BQ9UD71 204 aaPredicted RBP12.86□□□□□ -0.35
COPS7B-217ENST00000461350 C10orf71Q711Q0 1435 aa12.85□□□□□ -0.35
COPS7B-217ENST00000461350 CDK5RAP2Q96SN8 1893 aa12.85□□□□□ -0.35
COPS7B-217ENST00000461350 ADAMTSL1Q8N6G6 1762 aa12.85□□□□□ -0.35
COPS7B-217ENST00000461350 BIN1O00499 593 aa12.85□□□□□ -0.35
COPS7B-217ENST00000461350 NRDCO43847 1150 aa12.85□□□□□ -0.35
COPS7B-217ENST00000461350 DHX16O60231 1041 aaKnown RBP12.85□□□□□ -0.35
COPS7B-217ENST00000461350 SFPQP23246 707 aaKnown RBP eCLIP12.85□□□□□ -0.35
COPS7B-217ENST00000461350 PICALMQ13492 652 aa12.85□□□□□ -0.35
COPS7B-217ENST00000461350 C12orf60Q5U649 245 aa12.85□□□□□ -0.35
COPS7B-217ENST00000461350 SYT10Q6XYQ8 523 aa12.85□□□□□ -0.35
COPS7B-217ENST00000461350 KIAA0825Q8IV33 1275 aa12.85□□□□□ -0.35
COPS7B-217ENST00000461350 IFNKQ9P0W0 207 aa12.85□□□□□ -0.35
COPS7B-217ENST00000461350 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.85□□□□□ -0.35
COPS7B-217ENST00000461350 PCDHAC2Q9Y5I4 1007 aa12.85□□□□□ -0.35
COPS7B-217ENST00000461350 ERICH4A6NGS2 130 aa12.85□□□□□ -0.35
COPS7B-217ENST00000461350 POLR3DP05423 398 aaPredicted RBP12.85□□□□□ -0.35
COPS7B-217ENST00000461350 ERCC6LQ2NKX8 1250 aa12.85□□□□□ -0.35
COPS7B-217ENST00000461350 SBK1Q52WX2 424 aa12.85□□□□□ -0.35
COPS7B-217ENST00000461350 HOMER1Q86YM7 354 aa12.85□□□□□ -0.35
COPS7B-217ENST00000461350 CHMP4CQ96CF2 233 aa12.85□□□□□ -0.35
COPS7B-217ENST00000461350 ZSCAN10Q96SZ4 725 aaPredicted RBP12.85□□□□□ -0.35
COPS7B-217ENST00000461350 PCDHA7Q9UN72 937 aa12.85□□□□□ -0.35
COPS7B-217ENST00000461350 LAMB1P07942 1786 aa12.84□□□□□ -0.35
COPS7B-217ENST00000461350 KCNA3P22001 575 aa12.84□□□□□ -0.35
COPS7B-217ENST00000461350 STK38Q15208 465 aa12.84□□□□□ -0.35
COPS7B-217ENST00000461350 SEC23AQ15436 765 aa12.84□□□□□ -0.35
COPS7B-217ENST00000461350 DPCR1Q3MIW9 517 aa12.84□□□□□ -0.35
COPS7B-217ENST00000461350 TMED8Q6PL24 325 aaPredicted RBP12.84□□□□□ -0.35
COPS7B-217ENST00000461350 TTLL6Q8N841 843 aa12.84□□□□□ -0.35
COPS7B-217ENST00000461350 XPO4Q9C0E2 1151 aaKnown RBP12.84□□□□□ -0.35
COPS7B-217ENST00000461350 ST7Q9NRC1 585 aa12.84□□□□□ -0.35
COPS7B-217ENST00000461350 GAKO14976 1311 aa12.84□□□□□ -0.35
COPS7B-217ENST00000461350 R3HDM1Q15032 1099 aaKnown RBP12.84□□□□□ -0.35
COPS7B-217ENST00000461350 ATL3Q6DD88 541 aa12.84□□□□□ -0.35
COPS7B-217ENST00000461350 SYNE3Q6ZMZ3 975 aa12.84□□□□□ -0.35
COPS7B-217ENST00000461350 PODNQ7Z5L7 613 aa12.84□□□□□ -0.35
COPS7B-217ENST00000461350 FGRP09769 529 aa12.84□□□□□ -0.35
COPS7B-217ENST00000461350 E4F1Q66K89 784 aaPredicted RBP12.84□□□□□ -0.35
COPS7B-217ENST00000461350 NBPF11Q86T75 865 aa12.84□□□□□ -0.35
COPS7B-217ENST00000461350 ZNF654Q8IZM8 581 aa12.84□□□□□ -0.35
COPS7B-217ENST00000461350 SLC16A10Q8TF71 515 aa12.84□□□□□ -0.35
COPS7B-217ENST00000461350 FLT1P17948 1338 aa12.83□□□□□ -0.35
COPS7B-217ENST00000461350 NAV1Q8NEY1 1877 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms