RNA–Protein interactions for RNA: ENST00000461173.5

DHFR2-203, Transcript of dihydrofolate reductase 2, humanhuman

TSL 1 (best)

Gene DHFR2, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-203ENST00000461173 ANKRD7Q92527 254 aa11.3□□□□□ -0.6
DHFR2-203ENST00000461173 TNFRSF25Q93038 417 aa11.3□□□□□ -0.6
DHFR2-203ENST00000461173 IQSEC3Q9UPP2 1182 aaPredicted RBP11.3□□□□□ -0.6
DHFR2-203ENST00000461173 PCDHB6Q9Y5E3 794 aa11.3□□□□□ -0.6
DHFR2-203ENST00000461173 ACTN4O43707 911 aaKnown RBP11.29□□□□□ -0.6
DHFR2-203ENST00000461173 PPP4CP60510 307 aa11.29□□□□□ -0.6
DHFR2-203ENST00000461173 NR5A1Q13285 461 aa11.29□□□□□ -0.6
DHFR2-203ENST00000461173 PTPN14Q15678 1187 aa11.29□□□□□ -0.6
DHFR2-203ENST00000461173 FCHSD1Q86WN1 690 aa11.29□□□□□ -0.6
DHFR2-203ENST00000461173 DGKHQ86XP1 1220 aa11.29□□□□□ -0.6
DHFR2-203ENST00000461173 CTCFLQ8NI51 663 aaPredicted RBP11.29□□□□□ -0.6
DHFR2-203ENST00000461173 C16orf45Q96MC5 204 aaPredicted RBP11.29□□□□□ -0.6
DHFR2-203ENST00000461173 SH3GLB2Q9NR46 395 aa11.29□□□□□ -0.6
DHFR2-203ENST00000461173 BTAF1O14981 1849 aa11.29□□□□□ -0.6
DHFR2-203ENST00000461173 CNTNAP5Q8WYK1 1306 aa11.29□□□□□ -0.6
DHFR2-203ENST00000461173 BAZ2AQ9UIF9 1905 aaKnown RBP11.29□□□□□ -0.6
DHFR2-203ENST00000461173 POLR2DO15514 142 aaKnown RBP11.28□□□□□ -0.6
DHFR2-203ENST00000461173 ZNF18P17022 549 aa11.28□□□□□ -0.6
DHFR2-203ENST00000461173 KIF5BP33176 963 aa11.28□□□□□ -0.6
DHFR2-203ENST00000461173 GNAQP50148 359 aa11.28□□□□□ -0.6
DHFR2-203ENST00000461173 UBASH3AP57075 661 aa11.28□□□□□ -0.6
DHFR2-203ENST00000461173 GSTO1P78417 241 aa11.28□□□□□ -0.6
DHFR2-203ENST00000461173 CEP135Q66GS9 1140 aa11.28□□□□□ -0.6
DHFR2-203ENST00000461173 ARMCX5Q6P1M9 558 aa11.28□□□□□ -0.6
DHFR2-203ENST00000461173 SH3RF1Q7Z6J0 888 aa11.28□□□□□ -0.6
DHFR2-203ENST00000461173 VSTM4Q8IW00 320 aa11.28□□□□□ -0.6
DHFR2-203ENST00000461173 SMARCE1Q969G3 411 aa11.28□□□□□ -0.6
DHFR2-203ENST00000461173 TMX1Q9H3N1 280 aa11.28□□□□□ -0.6
DHFR2-203ENST00000461173 CABP5Q9NP86 173 aa11.28□□□□□ -0.6
DHFR2-203ENST00000461173 TCP11L1Q9NUJ3 509 aa11.28□□□□□ -0.6
DHFR2-203ENST00000461173 MKRN1Q9UHC7 482 aaKnown RBP11.28□□□□□ -0.6
DHFR2-203ENST00000461173 MAN1B1Q9UKM7 699 aa11.28□□□□□ -0.6
DHFR2-203ENST00000461173 LY75O60449 1722 aa11.28□□□□□ -0.6
DHFR2-203ENST00000461173 SLFN14P0C7P3 912 aa11.28□□□□□ -0.6
DHFR2-203ENST00000461173 CALML3P27482 149 aa11.28□□□□□ -0.6
DHFR2-203ENST00000461173 LMOD1P29536 600 aaPredicted RBP11.28□□□□□ -0.6
DHFR2-203ENST00000461173 RBM10P98175 930 aaKnown RBP11.28□□□□□ -0.6
DHFR2-203ENST00000461173 SEMA3FQ13275 785 aa11.28□□□□□ -0.6
DHFR2-203ENST00000461173 ARID5BQ14865 1188 aa11.28□□□□□ -0.6
DHFR2-203ENST00000461173 NPY5RQ15761 445 aa11.28□□□□□ -0.6
DHFR2-203ENST00000461173 PFKFB3Q16875 520 aaPredicted RBP11.28□□□□□ -0.6
DHFR2-203ENST00000461173 TMC6Q7Z403 805 aa11.28□□□□□ -0.6
DHFR2-203ENST00000461173 ZNF710Q8N1W2 664 aa11.28□□□□□ -0.6
DHFR2-203ENST00000461173 OXER1Q8TDS5 423 aa11.28□□□□□ -0.6
DHFR2-203ENST00000461173 SHISA4Q96DD7 197 aa11.28□□□□□ -0.6
DHFR2-203ENST00000461173 V9GY48 417 aaPredicted RBP11.28□□□□□ -0.6
DHFR2-203ENST00000461173 GNPATO15228 680 aa11.27□□□□□ -0.61
DHFR2-203ENST00000461173 BMP6P22004 513 aa11.27□□□□□ -0.61
DHFR2-203ENST00000461173 ATP2C1P98194 919 aaPredicted RBP11.27□□□□□ -0.61
DHFR2-203ENST00000461173 GRAPQ13588 217 aa11.27□□□□□ -0.61
DHFR2-203ENST00000461173 ARL6IP4Q66PJ3 421 aaKnown RBP11.27□□□□□ -0.61
DHFR2-203ENST00000461173 GALNT17Q6IS24 598 aa11.27□□□□□ -0.61
DHFR2-203ENST00000461173 KIF18AQ8NI77 898 aa11.27□□□□□ -0.61
DHFR2-203ENST00000461173 GRAPLQ8TC17 118 aaPredicted RBP11.27□□□□□ -0.61
DHFR2-203ENST00000461173 NGLY1Q96IV0 654 aa11.27□□□□□ -0.61
DHFR2-203ENST00000461173 GSDMAQ96QA5 445 aa11.27□□□□□ -0.61
DHFR2-203ENST00000461173 CSRNP2Q9H175 543 aa11.27□□□□□ -0.61
DHFR2-203ENST00000461173 VPS54Q9P1Q0 977 aa11.27□□□□□ -0.61
DHFR2-203ENST00000461173 SERTAD1Q9UHV2 236 aa11.27□□□□□ -0.61
DHFR2-203ENST00000461173 CCNL1Q9UK58 526 aaPredicted RBP11.27□□□□□ -0.61
DHFR2-203ENST00000461173 TAF1P21675 1872 aa11.27□□□□□ -0.61
DHFR2-203ENST00000461173 PLEKHA8P1O95397 391 aa11.26□□□□□ -0.61
DHFR2-203ENST00000461173 SERPINC1P01008 464 aa11.26□□□□□ -0.61
DHFR2-203ENST00000461173 LDHCP07864 332 aa11.26□□□□□ -0.61
DHFR2-203ENST00000461173 SCG2P13521 617 aa11.26□□□□□ -0.61
DHFR2-203ENST00000461173 PLCD1P51178 756 aa11.26□□□□□ -0.61
DHFR2-203ENST00000461173 C12orf60Q5U649 245 aa11.26□□□□□ -0.61
DHFR2-203ENST00000461173 BICDL1Q6ZP65 573 aa11.26□□□□□ -0.61
DHFR2-203ENST00000461173 XDHP47989 1333 aa11.26□□□□□ -0.61
DHFR2-203ENST00000461173 SPATA31A6Q5VVP1 1343 aa11.26□□□□□ -0.61
DHFR2-203ENST00000461173 TAF1LQ8IZX4 1826 aa11.26□□□□□ -0.61
DHFR2-203ENST00000461173 WTIPA6NIX2 430 aaPredicted RBP11.25□□□□□ -0.61
DHFR2-203ENST00000461173 BAG3O95817 575 aa11.25□□□□□ -0.61
DHFR2-203ENST00000461173 ATP1A3P13637 1013 aa11.25□□□□□ -0.61
DHFR2-203ENST00000461173 HMGB2P26583 209 aaKnown RBP11.25□□□□□ -0.61
DHFR2-203ENST00000461173 KLRK1P26718 216 aa11.25□□□□□ -0.61
DHFR2-203ENST00000461173 PRDX5P30044 214 aa11.25□□□□□ -0.61
DHFR2-203ENST00000461173 GRIN1Q05586 938 aa11.25□□□□□ -0.61
DHFR2-203ENST00000461173 TTC38Q5R3I4 469 aa11.25□□□□□ -0.61
DHFR2-203ENST00000461173 E4F1Q66K89 784 aaPredicted RBP11.25□□□□□ -0.61
DHFR2-203ENST00000461173 DZIP1Q86YF9 867 aaKnown RBP11.25□□□□□ -0.61
DHFR2-203ENST00000461173 CMTR1Q8N1G2 835 aaKnown RBP11.25□□□□□ -0.61
DHFR2-203ENST00000461173 CCDC82Q8N4S0 544 aa11.25□□□□□ -0.61
DHFR2-203ENST00000461173 SRBD1Q8N5C6 995 aaKnown RBP11.25□□□□□ -0.61
DHFR2-203ENST00000461173 ARHGEF1Q92888 912 aaKnown RBP11.25□□□□□ -0.61
DHFR2-203ENST00000461173 FBXW7Q969H0 707 aa11.25□□□□□ -0.61
DHFR2-203ENST00000461173 LZTS2Q9BRK4 669 aa11.25□□□□□ -0.61
DHFR2-203ENST00000461173 CCDC94Q9BW85 323 aaPredicted RBP11.25□□□□□ -0.61
DHFR2-203ENST00000461173 ZNF287Q9HBT7 754 aa11.25□□□□□ -0.61
DHFR2-203ENST00000461173 SRP68Q9UHB9 627 aaKnown RBP11.25□□□□□ -0.61
DHFR2-203ENST00000461173 CYP2D7A0A087X1C5 515 aa11.25□□□□□ -0.61
DHFR2-203ENST00000461173 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.25□□□□□ -0.61
DHFR2-203ENST00000461173 LDHBP07195 334 aaKnown RBP11.25□□□□□ -0.61
DHFR2-203ENST00000461173 TOP1P11387 765 aaKnown RBP11.25□□□□□ -0.61
DHFR2-203ENST00000461173 TBX2Q13207 712 aaPredicted RBP11.25□□□□□ -0.61
DHFR2-203ENST00000461173 CFAP100Q494V2 611 aa11.25□□□□□ -0.61
DHFR2-203ENST00000461173 RCSD1Q6JBY9 416 aa11.25□□□□□ -0.61
DHFR2-203ENST00000461173 AMOTL1Q8IY63 956 aa11.25□□□□□ -0.61
DHFR2-203ENST00000461173 DAGLBQ8NCG7 672 aa11.25□□□□□ -0.61
DHFR2-203ENST00000461173 CERKQ8TCT0 537 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms