RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 RAB3GAP1Q15042 981 aa19.31■□□□□ 0.68
SHANK1-205ENST00000461154 GADL1Q6ZQY3 521 aa19.31■□□□□ 0.68
SHANK1-205ENST00000461154 ERO1AQ96HE7 468 aa19.31■□□□□ 0.68
SHANK1-205ENST00000461154 CTNNA3Q9UI47 895 aa19.31■□□□□ 0.68
SHANK1-205ENST00000461154 PKN2Q16513 984 aaKnown RBP19.3■□□□□ 0.68
SHANK1-205ENST00000461154 GPAT2Q6NUI2 795 aa19.3■□□□□ 0.68
SHANK1-205ENST00000461154 ZNF444Q8N0Y2 327 aaPredicted RBP19.3■□□□□ 0.68
SHANK1-205ENST00000461154 STK11IPQ8N1F8 1099 aa19.3■□□□□ 0.68
SHANK1-205ENST00000461154 SLC45A1Q9Y2W3 748 aa19.3■□□□□ 0.68
SHANK1-205ENST00000461154 AKR1B1P15121 316 aa19.29■□□□□ 0.68
SHANK1-205ENST00000461154 RASA1P20936 1047 aa19.29■□□□□ 0.68
SHANK1-205ENST00000461154 SHROOM1Q2M3G4 852 aaPredicted RBP19.29■□□□□ 0.68
SHANK1-205ENST00000461154 KIAA1211Q6ZU35 1233 aa19.29■□□□□ 0.68
SHANK1-205ENST00000461154 PROCA1Q8NCQ7 364 aaPredicted RBP19.29■□□□□ 0.68
SHANK1-205ENST00000461154 ABHD8Q96I13 439 aa19.29■□□□□ 0.68
SHANK1-205ENST00000461154 PARK7Q99497 189 aaKnown RBP19.29■□□□□ 0.68
SHANK1-205ENST00000461154 IL25Q9H293 177 aa19.29■□□□□ 0.68
SHANK1-205ENST00000461154 PTPRFP10586 1907 aa19.28■□□□□ 0.68
SHANK1-205ENST00000461154 C19orf81C9J6K1 198 aa19.28■□□□□ 0.68
SHANK1-205ENST00000461154 ZNF213O14771 459 aa19.28■□□□□ 0.68
SHANK1-205ENST00000461154 CAPN15O75808 1086 aa19.28■□□□□ 0.68
SHANK1-205ENST00000461154 PCP11498 1178 aaKnown RBP19.28■□□□□ 0.68
SHANK1-205ENST00000461154 CTDSPL2Q05D32 466 aa19.28■□□□□ 0.68
SHANK1-205ENST00000461154 SEPT2Q15019 361 aa19.28■□□□□ 0.68
SHANK1-205ENST00000461154 ARHGEF6Q15052 776 aa19.28■□□□□ 0.68
SHANK1-205ENST00000461154 IMMTQ16891 758 aaKnown RBP19.28■□□□□ 0.68
SHANK1-205ENST00000461154 SH3D19Q5HYK7 790 aa19.28■□□□□ 0.68
SHANK1-205ENST00000461154 ESYT1Q9BSJ8 1104 aa19.28■□□□□ 0.68
SHANK1-205ENST00000461154 AGTPBP1Q9UPW5 1226 aa19.28■□□□□ 0.68
SHANK1-205ENST00000461154 LAMA4Q16363 1823 aa19.28■□□□□ 0.68
SHANK1-205ENST00000461154 USP17L10C9JJH3 530 aa19.27■□□□□ 0.68
SHANK1-205ENST00000461154 PRDM1O75626 825 aa19.27■□□□□ 0.68
SHANK1-205ENST00000461154 GUCY1A2P33402 732 aa19.27■□□□□ 0.68
SHANK1-205ENST00000461154 BACE1P56817 501 aa19.27■□□□□ 0.68
SHANK1-205ENST00000461154 PABPC4Q13310 644 aaKnown RBP eCLIP19.27■□□□□ 0.68
SHANK1-205ENST00000461154 MTMR2Q13614 643 aa19.27■□□□□ 0.68
SHANK1-205ENST00000461154 FEZ1Q99689 392 aa19.27■□□□□ 0.68
SHANK1-205ENST00000461154 RNF41Q9H4P4 317 aaPredicted RBP19.27■□□□□ 0.68
SHANK1-205ENST00000461154 KANSL2Q9H9L4 492 aa19.27■□□□□ 0.68
SHANK1-205ENST00000461154 USP14P54578 494 aa19.26■□□□□ 0.67
SHANK1-205ENST00000461154 HMGCS2P54868 508 aa19.26■□□□□ 0.67
SHANK1-205ENST00000461154 HAND2P61296 217 aa19.26■□□□□ 0.67
SHANK1-205ENST00000461154 ICA1Q05084 483 aa19.26■□□□□ 0.67
SHANK1-205ENST00000461154 C17orf99Q6UX52 265 aa19.26■□□□□ 0.67
SHANK1-205ENST00000461154 CD99L2Q8TCZ2 262 aa19.26■□□□□ 0.67
SHANK1-205ENST00000461154 SH2D4AQ9H788 454 aa19.26■□□□□ 0.67
SHANK1-205ENST00000461154 TMOD4Q9NZQ9 345 aa19.26■□□□□ 0.67
SHANK1-205ENST00000461154 PNMA3Q9UL41 463 aa19.26■□□□□ 0.67
SHANK1-205ENST00000461154 U3KPZ7 1027 aaPredicted RBP19.26■□□□□ 0.67
SHANK1-205ENST00000461154 LOC285556D6RIA3 1793 aa19.25■□□□□ 0.67
SHANK1-205ENST00000461154 TSPY3P0CV98 308 aa19.25■□□□□ 0.67
SHANK1-205ENST00000461154 TSPY8P0CW00 308 aa19.25■□□□□ 0.67
SHANK1-205ENST00000461154 KIF22Q14807 665 aa19.25■□□□□ 0.67
SHANK1-205ENST00000461154 AKNAD1Q5T1N1 836 aa19.25■□□□□ 0.67
SHANK1-205ENST00000461154 USP17L2Q6R6M4 530 aa19.25■□□□□ 0.67
SHANK1-205ENST00000461154 MFSD6Q6ZSS7 791 aa19.25■□□□□ 0.67
SHANK1-205ENST00000461154 KIAA1683Q9H0B3 1180 aa19.25■□□□□ 0.67
SHANK1-205ENST00000461154 ARHGEF10LQ9HCE6 1279 aa19.25■□□□□ 0.67
SHANK1-205ENST00000461154 TOMM22Q9NS69 142 aa19.25■□□□□ 0.67
SHANK1-205ENST00000461154 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.25■□□□□ 0.67
SHANK1-205ENST00000461154 PLIN4Q96Q06 1357 aa19.24■□□□□ 0.67
SHANK1-205ENST00000461154 GREB1LQ9C091 1923 aaPredicted RBP19.24■□□□□ 0.67
SHANK1-205ENST00000461154 ORC4O43929 436 aa19.24■□□□□ 0.67
SHANK1-205ENST00000461154 FGRP09769 529 aa19.24■□□□□ 0.67
SHANK1-205ENST00000461154 CYP2C8P10632 490 aa19.24■□□□□ 0.67
SHANK1-205ENST00000461154 NT5C2P49902 561 aa19.24■□□□□ 0.67
SHANK1-205ENST00000461154 PPP4R3BQ5MIZ7 849 aa19.24■□□□□ 0.67
SHANK1-205ENST00000461154 STAG1Q8WVM7 1258 aa19.24■□□□□ 0.67
SHANK1-205ENST00000461154 EFCC1Q9HA90 598 aa19.24■□□□□ 0.67
SHANK1-205ENST00000461154 CPA4Q9UI42 421 aa19.24■□□□□ 0.67
SHANK1-205ENST00000461154 TRIM17Q9Y577 477 aa19.24■□□□□ 0.67
SHANK1-205ENST00000461154 TSPY2A6NKD2 308 aa19.23■□□□□ 0.67
SHANK1-205ENST00000461154 RANBP6O60518 1105 aaKnown RBP19.23■□□□□ 0.67
SHANK1-205ENST00000461154 OSBPP22059 807 aa19.23■□□□□ 0.67
SHANK1-205ENST00000461154 TFAP4Q01664 338 aa19.23■□□□□ 0.67
SHANK1-205ENST00000461154 PTH1RQ03431 593 aa19.23■□□□□ 0.67
SHANK1-205ENST00000461154 TREML2Q5T2D2 321 aa19.23■□□□□ 0.67
SHANK1-205ENST00000461154 FBXO46Q6PJ61 603 aaPredicted RBP19.23■□□□□ 0.67
SHANK1-205ENST00000461154 OTOP1Q7RTM1 612 aa19.23■□□□□ 0.67
SHANK1-205ENST00000461154 NEDD1Q8NHV4 660 aa19.23■□□□□ 0.67
SHANK1-205ENST00000461154 ACER1Q8TDN7 264 aa19.23■□□□□ 0.67
SHANK1-205ENST00000461154 MAP4K1Q92918 833 aa19.23■□□□□ 0.67
SHANK1-205ENST00000461154 ANO2Q9NQ90 1003 aa19.23■□□□□ 0.67
SHANK1-205ENST00000461154 ADGRA2Q96PE1 1338 aa19.23■□□□□ 0.67
SHANK1-205ENST00000461154 ATP2B2Q01814 1243 aa19.22■□□□□ 0.67
SHANK1-205ENST00000461154 FAM47AQ5JRC9 791 aa19.22■□□□□ 0.67
SHANK1-205ENST00000461154 RRP12Q5JTH9 1297 aaKnown RBP19.22■□□□□ 0.67
SHANK1-205ENST00000461154 TBC1D10CQ8IV04 446 aa19.22■□□□□ 0.67
SHANK1-205ENST00000461154 SMCR8Q8TEV9 937 aaPredicted RBP19.22■□□□□ 0.67
SHANK1-205ENST00000461154 C12orf42Q96LP6 360 aa19.22■□□□□ 0.67
SHANK1-205ENST00000461154 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.22■□□□□ 0.67
SHANK1-205ENST00000461154 EEF2P13639 858 aaKnown RBP19.21■□□□□ 0.67
SHANK1-205ENST00000461154 LACTBP83111 547 aaPredicted RBP19.21■□□□□ 0.67
SHANK1-205ENST00000461154 ZYXQ15942 572 aaKnown RBP19.21■□□□□ 0.67
SHANK1-205ENST00000461154 CLEC10AQ8IUN9 316 aa19.21■□□□□ 0.67
SHANK1-205ENST00000461154 LSG1Q9H089 658 aaKnown RBP19.21■□□□□ 0.67
SHANK1-205ENST00000461154 NBPF3Q9H094 633 aa19.21■□□□□ 0.67
SHANK1-205ENST00000461154 CNNM2Q9H8M5 875 aa19.21■□□□□ 0.67
SHANK1-205ENST00000461154 EMILIN3Q9NT22 766 aa19.21■□□□□ 0.67
SHANK1-205ENST00000461154 NYAP2Q9P242 653 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms