RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.14□□□□□ -0.31
APTX-209ENST00000460940 LAMA4Q16363 1823 aa13.14□□□□□ -0.31
APTX-209ENST00000460940 C19orf81C9J6K1 198 aa13.13□□□□□ -0.31
APTX-209ENST00000460940 IGF2BP3O00425 579 aaKnown RBP eCLIP13.13□□□□□ -0.31
APTX-209ENST00000460940 ORC4O43929 436 aa13.13□□□□□ -0.31
APTX-209ENST00000460940 BACE1P56817 501 aa13.13□□□□□ -0.31
APTX-209ENST00000460940 SH3D19Q5HYK7 790 aa13.13□□□□□ -0.31
APTX-209ENST00000460940 KIAA1211Q6ZU35 1233 aa13.13□□□□□ -0.31
APTX-209ENST00000460940 ANKRD23Q86SG2 305 aa13.13□□□□□ -0.31
APTX-209ENST00000460940 PROCA1Q8NCQ7 364 aaPredicted RBP13.13□□□□□ -0.31
APTX-209ENST00000460940 RNF41Q9H4P4 317 aaPredicted RBP13.13□□□□□ -0.31
APTX-209ENST00000460940 RNF186Q9NXI6 227 aa13.13□□□□□ -0.31
APTX-209ENST00000460940 LOC285556D6RIA3 1793 aa13.12□□□□□ -0.31
APTX-209ENST00000460940 PTPRFP10586 1907 aa13.12□□□□□ -0.31
APTX-209ENST00000460940 USP17L10C9JJH3 530 aa13.12□□□□□ -0.31
APTX-209ENST00000460940 FGRP09769 529 aa13.12□□□□□ -0.31
APTX-209ENST00000460940 GUCY1A2P33402 732 aa13.12□□□□□ -0.31
APTX-209ENST00000460940 CTCFP49711 727 aaPredicted RBP13.12□□□□□ -0.31
APTX-209ENST00000460940 MOGSQ13724 837 aa13.12□□□□□ -0.31
APTX-209ENST00000460940 SEPT2Q15019 361 aa13.12□□□□□ -0.31
APTX-209ENST00000460940 IMMTQ16891 758 aaKnown RBP13.12□□□□□ -0.31
APTX-209ENST00000460940 ZNF444Q8N0Y2 327 aaPredicted RBP13.12□□□□□ -0.31
APTX-209ENST00000460940 PTPN18Q99952 460 aa13.12□□□□□ -0.31
APTX-209ENST00000460940 SH2D4AQ9H788 454 aa13.12□□□□□ -0.31
APTX-209ENST00000460940 SLC45A1Q9Y2W3 748 aa13.12□□□□□ -0.31
APTX-209ENST00000460940 U3KPZ7 1027 aaPredicted RBP13.12□□□□□ -0.31
APTX-209ENST00000460940 PCNTO95613 3336 aa13.12□□□□□ -0.31
APTX-209ENST00000460940 GREB1LQ9C091 1923 aaPredicted RBP13.12□□□□□ -0.31
APTX-209ENST00000460940 ZNF213O14771 459 aa13.12□□□□□ -0.31
APTX-209ENST00000460940 USP14P54578 494 aa13.12□□□□□ -0.31
APTX-209ENST00000460940 ICA1Q05084 483 aa13.12□□□□□ -0.31
APTX-209ENST00000460940 CTDSPL2Q05D32 466 aa13.12□□□□□ -0.31
APTX-209ENST00000460940 MTMR2Q13614 643 aa13.12□□□□□ -0.31
APTX-209ENST00000460940 PPP4R3BQ5MIZ7 849 aa13.12□□□□□ -0.31
APTX-209ENST00000460940 STAG1Q8WVM7 1258 aa13.12□□□□□ -0.31
APTX-209ENST00000460940 FEZ1Q99689 392 aa13.12□□□□□ -0.31
APTX-209ENST00000460940 ZMYND15Q9H091 742 aa13.12□□□□□ -0.31
APTX-209ENST00000460940 KIAA1683Q9H0B3 1180 aa13.12□□□□□ -0.31
APTX-209ENST00000460940 KANSL2Q9H9L4 492 aa13.12□□□□□ -0.31
APTX-209ENST00000460940 ARHGEF10LQ9HCE6 1279 aa13.12□□□□□ -0.31
APTX-209ENST00000460940 TMOD4Q9NZQ9 345 aa13.12□□□□□ -0.31
APTX-209ENST00000460940 BTBD19C9JJ37 291 aa13.11□□□□□ -0.31
APTX-209ENST00000460940 PRDM1O75626 825 aa13.11□□□□□ -0.31
APTX-209ENST00000460940 TRPA1O75762 1119 aa13.11□□□□□ -0.31
APTX-209ENST00000460940 HMGCS2P54868 508 aa13.11□□□□□ -0.31
APTX-209ENST00000460940 AKNAD1Q5T1N1 836 aa13.11□□□□□ -0.31
APTX-209ENST00000460940 USP17L2Q6R6M4 530 aa13.11□□□□□ -0.31
APTX-209ENST00000460940 GADL1Q6ZQY3 521 aa13.11□□□□□ -0.31
APTX-209ENST00000460940 STK11IPQ8N1F8 1099 aa13.11□□□□□ -0.31
APTX-209ENST00000460940 C12orf42Q96LP6 360 aa13.11□□□□□ -0.31
APTX-209ENST00000460940 AGTPBP1Q9UPW5 1226 aa13.11□□□□□ -0.31
APTX-209ENST00000460940 FOXN1O15353 648 aa13.1□□□□□ -0.31
APTX-209ENST00000460940 RRP9O43818 475 aaKnown RBP13.1□□□□□ -0.31
APTX-209ENST00000460940 TSPY3P0CV98 308 aa13.1□□□□□ -0.31
APTX-209ENST00000460940 TSPY8P0CW00 308 aa13.1□□□□□ -0.31
APTX-209ENST00000460940 HAND2P61296 217 aa13.1□□□□□ -0.31
APTX-209ENST00000460940 PABPC4Q13310 644 aaKnown RBP eCLIP13.1□□□□□ -0.31
APTX-209ENST00000460940 NOM1Q5C9Z4 860 aaKnown RBP13.1□□□□□ -0.31
APTX-209ENST00000460940 MFSD6Q6ZSS7 791 aa13.1□□□□□ -0.31
APTX-209ENST00000460940 NEDD1Q8NHV4 660 aa13.1□□□□□ -0.31
APTX-209ENST00000460940 NBPF3Q9H094 633 aa13.1□□□□□ -0.31
APTX-209ENST00000460940 SYNPO2Q9UMS6 1093 aa13.1□□□□□ -0.31
APTX-209ENST00000460940 IGKV6D-41A0A0C4DH26 115 aa13.1□□□□□ -0.31
APTX-209ENST00000460940 PTH1RQ03431 593 aa13.1□□□□□ -0.31
APTX-209ENST00000460940 GPAT2Q6NUI2 795 aa13.1□□□□□ -0.31
APTX-209ENST00000460940 TBC1D10CQ8IV04 446 aa13.1□□□□□ -0.31
APTX-209ENST00000460940 MAP4K1Q92918 833 aa13.1□□□□□ -0.31
APTX-209ENST00000460940 PARK7Q99497 189 aaKnown RBP13.1□□□□□ -0.31
APTX-209ENST00000460940 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.1□□□□□ -0.31
APTX-209ENST00000460940 LSG1Q9H089 658 aaKnown RBP13.1□□□□□ -0.31
APTX-209ENST00000460940 PNMA3Q9UL41 463 aa13.1□□□□□ -0.31
APTX-209ENST00000460940 TSPY2A6NKD2 308 aa13.09□□□□□ -0.31
APTX-209ENST00000460940 PDHXO00330 501 aa13.09□□□□□ -0.31
APTX-209ENST00000460940 HSPA8P11142 646 aaKnown RBP13.09□□□□□ -0.31
APTX-209ENST00000460940 TFAP4Q01664 338 aa13.09□□□□□ -0.31
APTX-209ENST00000460940 TAF1CQ15572 869 aaPredicted RBP13.09□□□□□ -0.31
APTX-209ENST00000460940 ACER1Q8TDN7 264 aa13.09□□□□□ -0.31
APTX-209ENST00000460940 ZFYVE28Q9HCC9 887 aa13.09□□□□□ -0.31
APTX-209ENST00000460940 ANO2Q9NQ90 1003 aa13.09□□□□□ -0.31
APTX-209ENST00000460940 TMX2Q9Y320 296 aa13.09□□□□□ -0.31
APTX-209ENST00000460940 RANBP6O60518 1105 aaKnown RBP13.08□□□□□ -0.32
APTX-209ENST00000460940 CRHR2Q13324 411 aa13.08□□□□□ -0.32
APTX-209ENST00000460940 LPAR1Q92633 364 aa13.08□□□□□ -0.32
APTX-209ENST00000460940 ESR2Q92731 530 aa13.08□□□□□ -0.32
APTX-209ENST00000460940 CNNM2Q9H8M5 875 aa13.08□□□□□ -0.32
APTX-209ENST00000460940 TOMM22Q9NS69 142 aa13.08□□□□□ -0.32
APTX-209ENST00000460940 NYAP2Q9P242 653 aa13.08□□□□□ -0.32
APTX-209ENST00000460940 RBM8AQ9Y5S9 174 aaKnown RBP13.08□□□□□ -0.32
APTX-209ENST00000460940 A0A1W2PRG0 241 aa13.08□□□□□ -0.32
APTX-209ENST00000460940 TTLL1O95922 423 aa13.08□□□□□ -0.32
APTX-209ENST00000460940 EEF2P13639 858 aaKnown RBP13.08□□□□□ -0.32
APTX-209ENST00000460940 FAM47AQ5JRC9 791 aa13.08□□□□□ -0.32
APTX-209ENST00000460940 TREML2Q5T2D2 321 aa13.08□□□□□ -0.32
APTX-209ENST00000460940 CLEC10AQ8IUN9 316 aa13.08□□□□□ -0.32
APTX-209ENST00000460940 CEP95Q96GE4 821 aa13.08□□□□□ -0.32
APTX-209ENST00000460940 KRT23Q9C075 422 aa13.08□□□□□ -0.32
APTX-209ENST00000460940 EMILIN3Q9NT22 766 aa13.08□□□□□ -0.32
APTX-209ENST00000460940 MTMR4Q9NYA4 1195 aa13.08□□□□□ -0.32
APTX-209ENST00000460940 TACC3Q9Y6A5 838 aa13.08□□□□□ -0.32
APTX-209ENST00000460940 TBC1D8O95759 1140 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms