RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 USP17L10C9JJH3 530 aa18.69■□□□□ 0.58
SDF4-204ENST00000459994 ELNP15502 786 aa18.69■□□□□ 0.58
SDF4-204ENST00000459994 FLT3LGP49771 235 aa18.69■□□□□ 0.58
SDF4-204ENST00000459994 FAM110CQ1W6H9 321 aa18.69■□□□□ 0.58
SDF4-204ENST00000459994 CERS3Q8IU89 383 aa18.69■□□□□ 0.58
SDF4-204ENST00000459994 ACER1Q8TDN7 264 aa18.69■□□□□ 0.58
SDF4-204ENST00000459994 RILPL2Q969X0 211 aa18.69■□□□□ 0.58
SDF4-204ENST00000459994 SHISA4Q96DD7 197 aa18.69■□□□□ 0.58
SDF4-204ENST00000459994 P2RX7Q99572 595 aaKnown RBP18.69■□□□□ 0.58
SDF4-204ENST00000459994 CRNKL1Q9BZJ0 848 aaKnown RBP18.69■□□□□ 0.58
SDF4-204ENST00000459994 TXNRD2Q9NNW7 524 aa18.69■□□□□ 0.58
SDF4-204ENST00000459994 MCM9Q9NXL9 1143 aa18.69■□□□□ 0.58
SDF4-204ENST00000459994 PNMA3Q9UL41 463 aa18.69■□□□□ 0.58
SDF4-204ENST00000459994 POLR3DP05423 398 aaPredicted RBP18.68■□□□□ 0.58
SDF4-204ENST00000459994 HOXD10P28358 340 aa18.68■□□□□ 0.58
SDF4-204ENST00000459994 CERKLQ49MI3 558 aaPredicted RBP18.68■□□□□ 0.58
SDF4-204ENST00000459994 TMED8Q6PL24 325 aaPredicted RBP18.68■□□□□ 0.58
SDF4-204ENST00000459994 TTC6Q86TZ1 520 aa18.68■□□□□ 0.58
SDF4-204ENST00000459994 DYNLL2Q96FJ2 89 aa18.68■□□□□ 0.58
SDF4-204ENST00000459994 TMEM106CQ9BVX2 250 aa18.68■□□□□ 0.58
SDF4-204ENST00000459994 PUS7LQ9H0K6 701 aaKnown RBP18.68■□□□□ 0.58
SDF4-204ENST00000459994 GREB1LQ9C091 1923 aaPredicted RBP18.68■□□□□ 0.58
SDF4-204ENST00000459994 COL11A1P12107 1806 aaPredicted RBP18.67■□□□□ 0.58
SDF4-204ENST00000459994 ALPK3Q96L96 1907 aa18.67■□□□□ 0.58
SDF4-204ENST00000459994 TNPO2O14787 897 aaKnown RBP18.67■□□□□ 0.58
SDF4-204ENST00000459994 HOXA7P31268 230 aaPredicted RBP18.67■□□□□ 0.58
SDF4-204ENST00000459994 RAB3GAP1Q15042 981 aa18.67■□□□□ 0.58
SDF4-204ENST00000459994 ABCB5Q2M3G0 1257 aa18.67■□□□□ 0.58
SDF4-204ENST00000459994 LRRFIP1Q32MZ4 808 aaKnown RBP18.67■□□□□ 0.58
SDF4-204ENST00000459994 FSD1Q9BTV5 496 aa18.67■□□□□ 0.58
SDF4-204ENST00000459994 GINM1Q9NU53 330 aa18.67■□□□□ 0.58
SDF4-204ENST00000459994 TMOD4Q9NZQ9 345 aa18.67■□□□□ 0.58
SDF4-204ENST00000459994 C19orf81C9J6K1 198 aa18.66■□□□□ 0.58
SDF4-204ENST00000459994 ADCY3O60266 1144 aa18.66■□□□□ 0.58
SDF4-204ENST00000459994 SEPT2Q15019 361 aa18.66■□□□□ 0.58
SDF4-204ENST00000459994 ZSCAN25Q6NSZ9 544 aa18.66■□□□□ 0.58
SDF4-204ENST00000459994 CLEC10AQ8IUN9 316 aa18.66■□□□□ 0.58
SDF4-204ENST00000459994 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.66■□□□□ 0.58
SDF4-204ENST00000459994 A0A0G2JMZ2 1700 aa18.66■□□□□ 0.58
SDF4-204ENST00000459994 HIP1O00291 1037 aa18.65■□□□□ 0.58
SDF4-204ENST00000459994 ZFYP08048 801 aaPredicted RBP18.65■□□□□ 0.58
SDF4-204ENST00000459994 CCL5P13501 91 aa18.65■□□□□ 0.58
SDF4-204ENST00000459994 HERVK_113P62684 666 aa18.65■□□□□ 0.58
SDF4-204ENST00000459994 IRX3P78415 501 aaPredicted RBP18.65■□□□□ 0.58
SDF4-204ENST00000459994 PABPC4Q13310 644 aaKnown RBP eCLIP18.65■□□□□ 0.58
SDF4-204ENST00000459994 Q3C1V9 767 aa18.65■□□□□ 0.58
SDF4-204ENST00000459994 USP17L2Q6R6M4 530 aa18.65■□□□□ 0.58
SDF4-204ENST00000459994 UNC93B1Q9H1C4 597 aa18.65■□□□□ 0.58
SDF4-204ENST00000459994 RBPJLQ9UBG7 517 aa18.65■□□□□ 0.58
SDF4-204ENST00000459994 MORF4L1Q9UBU8 362 aa18.65■□□□□ 0.58
SDF4-204ENST00000459994 A0A1W2PRG0 241 aa18.64■□□□□ 0.57
SDF4-204ENST00000459994 GCLCP48506 637 aaPredicted RBP18.64■□□□□ 0.57
SDF4-204ENST00000459994 UBE3CQ15386 1083 aa18.64■□□□□ 0.57
SDF4-204ENST00000459994 PRPF38BQ5VTL8 546 aaKnown RBP18.64■□□□□ 0.57
SDF4-204ENST00000459994 GJD2Q9UKL4 321 aa18.64■□□□□ 0.57
SDF4-204ENST00000459994 TAOK2Q9UL54 1235 aa18.64■□□□□ 0.57
SDF4-204ENST00000459994 FRMPD3Q5JV73 1810 aa18.64■□□□□ 0.57
SDF4-204ENST00000459994 MYH4Q9Y623 1939 aa18.64■□□□□ 0.57
SDF4-204ENST00000459994 RNF113AO15541 343 aaKnown RBP18.63■□□□□ 0.57
SDF4-204ENST00000459994 CDC45O75419 566 aa18.63■□□□□ 0.57
SDF4-204ENST00000459994 CNMDO75829 334 aa18.63■□□□□ 0.57
SDF4-204ENST00000459994 INHAP05111 366 aa18.63■□□□□ 0.57
SDF4-204ENST00000459994 TRIM32Q13049 653 aa18.63■□□□□ 0.57
SDF4-204ENST00000459994 KIAA1755Q5JYT7 1200 aa18.63■□□□□ 0.57
SDF4-204ENST00000459994 SLAIN1Q8ND83 568 aa18.63■□□□□ 0.57
SDF4-204ENST00000459994 C12orf42Q96LP6 360 aa18.63■□□□□ 0.57
SDF4-204ENST00000459994 BIN2Q9UBW5 565 aaPredicted RBP18.63■□□□□ 0.57
SDF4-204ENST00000459994 USP17L12C9JPN9 530 aa18.62■□□□□ 0.57
SDF4-204ENST00000459994 USP17L21D6R901 530 aa18.62■□□□□ 0.57
SDF4-204ENST00000459994 AKR1B1P15121 316 aa18.62■□□□□ 0.57
SDF4-204ENST00000459994 VCAM1P19320 739 aa18.62■□□□□ 0.57
SDF4-204ENST00000459994 CHMLP26374 656 aa18.62■□□□□ 0.57
SDF4-204ENST00000459994 IRF5Q13568 498 aa18.62■□□□□ 0.57
SDF4-204ENST00000459994 OSBP2Q969R2 916 aa18.62■□□□□ 0.57
SDF4-204ENST00000459994 COA7Q96BR5 231 aa18.62■□□□□ 0.57
SDF4-204ENST00000459994 FEZ1Q99689 392 aa18.62■□□□□ 0.57
SDF4-204ENST00000459994 PAGR1Q9BTK6 254 aa18.62■□□□□ 0.57
SDF4-204ENST00000459994 KIAA1683Q9H0B3 1180 aa18.62■□□□□ 0.57
SDF4-204ENST00000459994 RNF208Q9H0X6 261 aa18.62■□□□□ 0.57
SDF4-204ENST00000459994 PORCNQ9H237 461 aa18.62■□□□□ 0.57
SDF4-204ENST00000459994 SLC4A4Q9Y6R1 1079 aa18.62■□□□□ 0.57
SDF4-204ENST00000459994 ZNFX1Q9P2E3 1918 aaKnown RBP18.62■□□□□ 0.57
SDF4-204ENST00000459994 MPHOSPH10O00566 681 aaKnown RBP18.61■□□□□ 0.57
SDF4-204ENST00000459994 C12orf60Q5U649 245 aa18.61■□□□□ 0.57
SDF4-204ENST00000459994 CTR9Q6PD62 1173 aa18.61■□□□□ 0.57
SDF4-204ENST00000459994 SIAH1Q8IUQ4 282 aa18.61■□□□□ 0.57
SDF4-204ENST00000459994 CABP5Q9NP86 173 aa18.61■□□□□ 0.57
SDF4-204ENST00000459994 DIAPH3Q9NSV4 1193 aa18.61■□□□□ 0.57
SDF4-204ENST00000459994 ATP8A2Q9NTI2 1148 aa18.61■□□□□ 0.57
SDF4-204ENST00000459994 CDK8P49336 464 aa18.6■□□□□ 0.57
SDF4-204ENST00000459994 ERVK-9P63128 1117 aa18.6■□□□□ 0.57
SDF4-204ENST00000459994 ERVK-24P63145 666 aa18.6■□□□□ 0.57
SDF4-204ENST00000459994 ZMYM1Q5SVZ6 1142 aa18.6■□□□□ 0.57
SDF4-204ENST00000459994 CATSPERGQ6ZRH7 1159 aa18.6■□□□□ 0.57
SDF4-204ENST00000459994 PXYLP1Q8TE99 480 aa18.6■□□□□ 0.57
SDF4-204ENST00000459994 STRBPQ96SI9 672 aaKnown RBP18.6■□□□□ 0.57
SDF4-204ENST00000459994 M0R2C6 588 aa18.59■□□□□ 0.57
SDF4-204ENST00000459994 GJB1P08034 283 aa18.59■□□□□ 0.57
SDF4-204ENST00000459994 GJA8P48165 433 aa18.59■□□□□ 0.57
SDF4-204ENST00000459994 UBXN2AP68543 259 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms