RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 PLCD1P51178 756 aa15.03■□□□□ -0
GPNMB-204ENST00000459927 MAP3K12Q12852 859 aa15.03■□□□□ -0
GPNMB-204ENST00000459927 TMED8Q6PL24 325 aaPredicted RBP15.03■□□□□ -0
GPNMB-204ENST00000459927 EHD4Q9H223 541 aa15.03■□□□□ -0
GPNMB-204ENST00000459927 ALPK3Q96L96 1907 aa15.02■□□□□ -0
GPNMB-204ENST00000459927 CDK5RAP2Q96SN8 1893 aa15.02■□□□□ -0
GPNMB-204ENST00000459927 COL6A1P12109 1028 aa15.02■□□□□ -0
GPNMB-204ENST00000459927 ZKSCAN1P17029 563 aaPredicted RBP15.02■□□□□ -0
GPNMB-204ENST00000459927 SYN1P17600 705 aa15.02■□□□□ -0
GPNMB-204ENST00000459927 USP14P54578 494 aa15.02■□□□□ -0
GPNMB-204ENST00000459927 MAP2K5Q13163 448 aa15.02■□□□□ -0
GPNMB-204ENST00000459927 RAB3GAP1Q15042 981 aa15.02■□□□□ -0
GPNMB-204ENST00000459927 ABCB5Q2M3G0 1257 aa15.02■□□□□ -0
GPNMB-204ENST00000459927 ITPRIPQ8IWB1 547 aa15.02■□□□□ -0
GPNMB-204ENST00000459927 FTSJ3Q8IY81 847 aaKnown RBP15.02■□□□□ -0
GPNMB-204ENST00000459927 ACER1Q8TDN7 264 aa15.02■□□□□ -0
GPNMB-204ENST00000459927 KIAA1683Q9H0B3 1180 aa15.02■□□□□ -0
GPNMB-204ENST00000459927 CABP5Q9NP86 173 aa15.02■□□□□ -0
GPNMB-204ENST00000459927 PFASO15067 1338 aa15.01□□□□□ -0.01
GPNMB-204ENST00000459927 GLRX3O76003 335 aaKnown RBP15.01□□□□□ -0.01
GPNMB-204ENST00000459927 PTPREP23469 700 aa15.01□□□□□ -0.01
GPNMB-204ENST00000459927 CCNA1P78396 465 aa15.01□□□□□ -0.01
GPNMB-204ENST00000459927 ZYXQ15942 572 aaKnown RBP15.01□□□□□ -0.01
GPNMB-204ENST00000459927 GPR153Q6NV75 609 aa15.01□□□□□ -0.01
GPNMB-204ENST00000459927 CEP85Q6P2H3 762 aa15.01□□□□□ -0.01
GPNMB-204ENST00000459927 SLC17A8Q8NDX2 589 aa15.01□□□□□ -0.01
GPNMB-204ENST00000459927 RIOK1Q9BRS2 568 aaKnown RBP15.01□□□□□ -0.01
GPNMB-204ENST00000459927 SLC15A5A6NIM6 579 aa15□□□□□ -0.01
GPNMB-204ENST00000459927 GUCY1A2P33402 732 aa15□□□□□ -0.01
GPNMB-204ENST00000459927 SHMT1P34896 483 aa15□□□□□ -0.01
GPNMB-204ENST00000459927 MAGEA10P43363 369 aaPredicted RBP15□□□□□ -0.01
GPNMB-204ENST00000459927 LRIT3Q3SXY7 679 aa15□□□□□ -0.01
GPNMB-204ENST00000459927 LBX2Q6XYB7 198 aa15□□□□□ -0.01
GPNMB-204ENST00000459927 AACSQ86V21 672 aa15□□□□□ -0.01
GPNMB-204ENST00000459927 FEZ1Q99689 392 aa15□□□□□ -0.01
GPNMB-204ENST00000459927 FLRT1Q9NZU1 646 aa15□□□□□ -0.01
GPNMB-204ENST00000459927 BTBD7Q9P203 1132 aa15□□□□□ -0.01
GPNMB-204ENST00000459927 EXOC6BQ9Y2D4 811 aa15□□□□□ -0.01
GPNMB-204ENST00000459927 FOCADQ5VW36 1801 aa15□□□□□ -0.01
GPNMB-204ENST00000459927 MYH1P12882 1939 aa15□□□□□ -0.01
GPNMB-204ENST00000459927 POLR3DP05423 398 aaPredicted RBP14.99□□□□□ -0.01
GPNMB-204ENST00000459927 GABPAQ06546 454 aa14.99□□□□□ -0.01
GPNMB-204ENST00000459927 ERC1Q8IUD2 1116 aa14.99□□□□□ -0.01
GPNMB-204ENST00000459927 APBA2Q99767 749 aa14.99□□□□□ -0.01
GPNMB-204ENST00000459927 CWC22Q9HCG8 908 aaKnown RBP14.99□□□□□ -0.01
GPNMB-204ENST00000459927 HOXC10Q9NYD6 342 aa14.99□□□□□ -0.01
GPNMB-204ENST00000459927 MAGEB6P1A0A0J9YX57 407 aa14.98□□□□□ -0.01
GPNMB-204ENST00000459927 HOXC6P09630 235 aa14.98□□□□□ -0.01
GPNMB-204ENST00000459927 VCAM1P19320 739 aa14.98□□□□□ -0.01
GPNMB-204ENST00000459927 ATP2B2Q01814 1243 aa14.98□□□□□ -0.01
GPNMB-204ENST00000459927 COG2Q14746 738 aa14.98□□□□□ -0.01
GPNMB-204ENST00000459927 SEPT2Q15019 361 aa14.98□□□□□ -0.01
GPNMB-204ENST00000459927 TTF1Q15361 905 aaPredicted RBP14.98□□□□□ -0.01
GPNMB-204ENST00000459927 LRRC26Q2I0M4 334 aa14.98□□□□□ -0.01
GPNMB-204ENST00000459927 SLC9C2Q5TAH2 1124 aa14.98□□□□□ -0.01
GPNMB-204ENST00000459927 MFSD14CQ5VZR4 134 aa14.98□□□□□ -0.01
GPNMB-204ENST00000459927 NPLOC4Q8TAT6 608 aa14.98□□□□□ -0.01
GPNMB-204ENST00000459927 RHPN1Q8TCX5 695 aa14.98□□□□□ -0.01
GPNMB-204ENST00000459927 UBE2OQ9C0C9 1292 aaKnown RBP14.98□□□□□ -0.01
GPNMB-204ENST00000459927 A0A1W2PRG0 241 aa14.97□□□□□ -0.01
GPNMB-204ENST00000459927 IGHA2P01877 340 aa14.97□□□□□ -0.01
GPNMB-204ENST00000459927 HNRNPUQ00839 825 aaKnown RBP eCLIP14.97□□□□□ -0.01
GPNMB-204ENST00000459927 HSP90AB4PQ58FF6 505 aa14.97□□□□□ -0.01
GPNMB-204ENST00000459927 WDR78Q5VTH9 848 aa14.97□□□□□ -0.01
GPNMB-204ENST00000459927 TDHQ8IZJ6 230 aa14.97□□□□□ -0.01
GPNMB-204ENST00000459927 SENP6Q9GZR1 1112 aaPredicted RBP14.97□□□□□ -0.01
GPNMB-204ENST00000459927 RPAP3Q9H6T3 665 aaPredicted RBP14.97□□□□□ -0.01
GPNMB-204ENST00000459927 IL1RAPL2Q9NP60 686 aa14.97□□□□□ -0.01
GPNMB-204ENST00000459927 LAMA3Q16787 3333 aa14.97□□□□□ -0.01
GPNMB-204ENST00000459927 SPDYE16A6NNV3 312 aaPredicted RBP14.96□□□□□ -0.01
GPNMB-204ENST00000459927 DLL1O00548 723 aa14.96□□□□□ -0.01
GPNMB-204ENST00000459927 STRNO43815 780 aa14.96□□□□□ -0.01
GPNMB-204ENST00000459927 CNGA1P29973 690 aa14.96□□□□□ -0.01
GPNMB-204ENST00000459927 EVX2Q03828 476 aa14.96□□□□□ -0.01
GPNMB-204ENST00000459927 GRB14Q14449 540 aa14.96□□□□□ -0.01
GPNMB-204ENST00000459927 DDX60LQ5H9U9 1706 aaKnown RBP14.96□□□□□ -0.01
GPNMB-204ENST00000459927 SIAH1Q8IUQ4 282 aa14.96□□□□□ -0.01
GPNMB-204ENST00000459927 DEFB123Q8N688 67 aa14.96□□□□□ -0.01
GPNMB-204ENST00000459927 PANK1Q8TE04 598 aa14.96□□□□□ -0.01
GPNMB-204ENST00000459927 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.96□□□□□ -0.01
GPNMB-204ENST00000459927 CRNKL1Q9BZJ0 848 aaKnown RBP14.96□□□□□ -0.01
GPNMB-204ENST00000459927 MCM9Q9NXL9 1143 aa14.96□□□□□ -0.01
GPNMB-204ENST00000459927 PDE6AP16499 860 aa14.95□□□□□ -0.02
GPNMB-204ENST00000459927 CYP2C19P33261 490 aa14.95□□□□□ -0.02
GPNMB-204ENST00000459927 RPAP2Q8IXW5 612 aaPredicted RBP14.95□□□□□ -0.02
GPNMB-204ENST00000459927 CLASRPQ8N2M8 674 aaKnown RBP14.95□□□□□ -0.02
GPNMB-204ENST00000459927 TRPV1Q8NER1 839 aa14.95□□□□□ -0.02
GPNMB-204ENST00000459927 LPAR1Q92633 364 aa14.95□□□□□ -0.02
GPNMB-204ENST00000459927 DCP1AQ9NPI6 582 aaPredicted RBP14.95□□□□□ -0.02
GPNMB-204ENST00000459927 DDX20Q9UHI6 824 aaKnown RBP14.95□□□□□ -0.02
GPNMB-204ENST00000459927 IVNS1ABPQ9Y6Y0 642 aa14.95□□□□□ -0.02
GPNMB-204ENST00000459927 ZNF532Q9HCE3 1301 aa14.94□□□□□ -0.02
GPNMB-204ENST00000459927 MAST2Q6P0Q8 1798 aa14.94□□□□□ -0.02
GPNMB-204ENST00000459927 TCRBV5S4A2TA0A5A2 114 aa14.94□□□□□ -0.02
GPNMB-204ENST00000459927 MPHOSPH10O00566 681 aaKnown RBP14.94□□□□□ -0.02
GPNMB-204ENST00000459927 MSCO60682 206 aa14.94□□□□□ -0.02
GPNMB-204ENST00000459927 KIAA1755Q5JYT7 1200 aa14.94□□□□□ -0.02
GPNMB-204ENST00000459927 Q7L0L9 218 aa14.94□□□□□ -0.02
GPNMB-204ENST00000459927 DPP9Q86TI2 863 aa14.94□□□□□ -0.02
GPNMB-204ENST00000459927 MOV10L1Q9BXT6 1211 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms