RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 MKNK2Q9HBH9 465 aa25.92■■□□□ 1.74
SSNA1-202ENST00000459860 PPP4R2Q9NY27 417 aa25.92■■□□□ 1.74
SSNA1-202ENST00000459860 POTEFA5A3E0 1075 aa25.91■■□□□ 1.74
SSNA1-202ENST00000459860 TMEM179Q6ZVK1 233 aa25.91■■□□□ 1.74
SSNA1-202ENST00000459860 ZNF589Q86UQ0 364 aaPredicted RBP25.91■■□□□ 1.74
SSNA1-202ENST00000459860 PROCA1Q8NCQ7 364 aaPredicted RBP25.91■■□□□ 1.74
SSNA1-202ENST00000459860 TMOD4Q9NZQ9 345 aa25.91■■□□□ 1.74
SSNA1-202ENST00000459860 USP17L10C9JJH3 530 aa25.9■■□□□ 1.74
SSNA1-202ENST00000459860 PDHXO00330 501 aa25.9■■□□□ 1.74
SSNA1-202ENST00000459860 HMGCS2P54868 508 aa25.9■■□□□ 1.74
SSNA1-202ENST00000459860 MTMR2Q13614 643 aa25.9■■□□□ 1.74
SSNA1-202ENST00000459860 VPS53Q5VIR6 699 aa25.9■■□□□ 1.74
SSNA1-202ENST00000459860 STK11IPQ8N1F8 1099 aa25.9■■□□□ 1.74
SSNA1-202ENST00000459860 RUFY2Q8WXA3 655 aa25.9■■□□□ 1.74
SSNA1-202ENST00000459860 EFCC1Q9HA90 598 aa25.9■■□□□ 1.74
SSNA1-202ENST00000459860 C19orf81C9J6K1 198 aa25.89■■□□□ 1.74
SSNA1-202ENST00000459860 SMIM22K7EJ46 135 aa25.89■■□□□ 1.74
SSNA1-202ENST00000459860 HSPD1P10809 573 aaKnown RBP25.89■■□□□ 1.74
SSNA1-202ENST00000459860 BACE1P56817 501 aa25.89■■□□□ 1.74
SSNA1-202ENST00000459860 PDE4BQ07343 736 aa25.89■■□□□ 1.74
SSNA1-202ENST00000459860 PPARAQ07869 468 aa25.89■■□□□ 1.74
SSNA1-202ENST00000459860 MOGSQ13724 837 aa25.89■■□□□ 1.74
SSNA1-202ENST00000459860 ARMC5Q96C12 935 aa25.89■■□□□ 1.74
SSNA1-202ENST00000459860 PARK7Q99497 189 aaKnown RBP25.89■■□□□ 1.74
SSNA1-202ENST00000459860 RAD50Q92878 1312 aa25.88■■□□□ 1.73
SSNA1-202ENST00000459860 AKR1B1P15121 316 aa25.88■■□□□ 1.73
SSNA1-202ENST00000459860 PABPC4Q13310 644 aaKnown RBP eCLIP25.88■■□□□ 1.735e-9■■■■□ 24.9
SSNA1-202ENST00000459860 SEPT2Q15019 361 aa25.88■■□□□ 1.73
SSNA1-202ENST00000459860 ALX1Q15699 326 aa25.88■■□□□ 1.73
SSNA1-202ENST00000459860 SH3D19Q5HYK7 790 aa25.88■■□□□ 1.73
SSNA1-202ENST00000459860 AGTPBP1Q9UPW5 1226 aa25.88■■□□□ 1.73
SSNA1-202ENST00000459860 SLC45A1Q9Y2W3 748 aa25.88■■□□□ 1.73
SSNA1-202ENST00000459860 ZMYM6O95789 1325 aa25.88■■□□□ 1.73
SSNA1-202ENST00000459860 FOXP2O15409 715 aa25.87■■□□□ 1.73
SSNA1-202ENST00000459860 PNMA3Q9UL41 463 aa25.87■■□□□ 1.73
SSNA1-202ENST00000459860 MKI67P46013 3256 aaKnown RBP25.86■■□□□ 1.73
SSNA1-202ENST00000459860 USP14P54578 494 aa25.86■■□□□ 1.73
SSNA1-202ENST00000459860 GPAT2Q6NUI2 795 aa25.86■■□□□ 1.73
SSNA1-202ENST00000459860 ZNF444Q8N0Y2 327 aaPredicted RBP25.86■■□□□ 1.73
SSNA1-202ENST00000459860 ARHGEF10LQ9HCE6 1279 aa25.86■■□□□ 1.73
SSNA1-202ENST00000459860 LAMA4Q16363 1823 aa25.86■■□□□ 1.73
SSNA1-202ENST00000459860 CENPFP49454 3210 aa25.85■■□□□ 1.73
SSNA1-202ENST00000459860 ICA1Q05084 483 aa25.85■■□□□ 1.73
SSNA1-202ENST00000459860 USP17L2Q6R6M4 530 aa25.85■■□□□ 1.73
SSNA1-202ENST00000459860 SH2D4AQ9H788 454 aa25.85■■□□□ 1.73
SSNA1-202ENST00000459860 GREB1LQ9C091 1923 aaPredicted RBP25.84■■□□□ 1.73
SSNA1-202ENST00000459860 TLR2O60603 784 aa25.84■■□□□ 1.73
SSNA1-202ENST00000459860 FGAP02671 866 aa25.84■■□□□ 1.73
SSNA1-202ENST00000459860 CHMLP26374 656 aa25.84■■□□□ 1.73
SSNA1-202ENST00000459860 GUCY1A2P33402 732 aa25.84■■□□□ 1.73
SSNA1-202ENST00000459860 ZYXQ15942 572 aaKnown RBP25.84■■□□□ 1.73
SSNA1-202ENST00000459860 RASA1P20936 1047 aa25.83■■□□□ 1.73
SSNA1-202ENST00000459860 BMP2KLQ5H9B9 411 aa25.83■■□□□ 1.73
SSNA1-202ENST00000459860 TREML2Q5T2D2 321 aa25.83■■□□□ 1.73
SSNA1-202ENST00000459860 SKAP1Q86WV1 359 aa25.83■■□□□ 1.73
SSNA1-202ENST00000459860 KIAA1683Q9H0B3 1180 aa25.83■■□□□ 1.73
SSNA1-202ENST00000459860 ANAPC4Q9UJX5 808 aa25.83■■□□□ 1.73
SSNA1-202ENST00000459860 BRCA2P51587 3418 aa25.82■■□□□ 1.72
SSNA1-202ENST00000459860 PRDM1O75626 825 aa25.82■■□□□ 1.72
SSNA1-202ENST00000459860 OSBPP22059 807 aa25.82■■□□□ 1.72
SSNA1-202ENST00000459860 CTDSPL2Q05D32 466 aa25.82■■□□□ 1.72
SSNA1-202ENST00000459860 SMCR8Q8TEV9 937 aaPredicted RBP25.82■■□□□ 1.72
SSNA1-202ENST00000459860 DSCC1Q9BVC3 393 aa25.82■■□□□ 1.72
SSNA1-202ENST00000459860 KANSL2Q9H9L4 492 aa25.82■■□□□ 1.72
SSNA1-202ENST00000459860 PCDH10Q9P2E7 1040 aa25.82■■□□□ 1.72
SSNA1-202ENST00000459860 ACER1Q8TDN7 264 aa25.81■■□□□ 1.72
SSNA1-202ENST00000459860 ZNF333Q96JL9 665 aa25.81■■□□□ 1.72
SSNA1-202ENST00000459860 C12orf42Q96LP6 360 aa25.81■■□□□ 1.72
SSNA1-202ENST00000459860 TSPY3P0CV98 308 aa25.8■■□□□ 1.72
SSNA1-202ENST00000459860 TSPY8P0CW00 308 aa25.8■■□□□ 1.72
SSNA1-202ENST00000459860 CYP2C8P10632 490 aa25.8■■□□□ 1.72
SSNA1-202ENST00000459860 IRX3P78415 501 aaPredicted RBP25.8■■□□□ 1.72
SSNA1-202ENST00000459860 ATP2B2Q01814 1243 aa25.8■■□□□ 1.72
SSNA1-202ENST00000459860 CTNNA3Q9UI47 895 aa25.8■■□□□ 1.72
SSNA1-202ENST00000459860 PTCH2Q9Y6C5 1203 aa25.8■■□□□ 1.72
SSNA1-202ENST00000459860 MYH4Q9Y623 1939 aa25.8■■□□□ 1.72
SSNA1-202ENST00000459860 EN2P19622 333 aaPredicted RBP25.79■■□□□ 1.72
SSNA1-202ENST00000459860 TOMM22Q9NS69 142 aa25.79■■□□□ 1.72
SSNA1-202ENST00000459860 EMILIN3Q9NT22 766 aa25.79■■□□□ 1.72
SSNA1-202ENST00000459860 ZNF213O14771 459 aa25.78■■□□□ 1.72
SSNA1-202ENST00000459860 HAND2P61296 217 aa25.78■■□□□ 1.72
SSNA1-202ENST00000459860 ARHGEF6Q15052 776 aa25.78■■□□□ 1.72
SSNA1-202ENST00000459860 CLEC10AQ8IUN9 316 aa25.78■■□□□ 1.72
SSNA1-202ENST00000459860 ARHGAP39Q9C0H5 1083 aa25.78■■□□□ 1.72
SSNA1-202ENST00000459860 CPA4Q9UI42 421 aa25.78■■□□□ 1.72
SSNA1-202ENST00000459860 TSPY2A6NKD2 308 aa25.77■■□□□ 1.72
SSNA1-202ENST00000459860 EEF2P13639 858 aaKnown RBP25.77■■□□□ 1.72
SSNA1-202ENST00000459860 HOXA7P31268 230 aaPredicted RBP25.77■■□□□ 1.72
SSNA1-202ENST00000459860 KIF22Q14807 665 aa25.77■■□□□ 1.72
SSNA1-202ENST00000459860 CASC1Q6TDU7 716 aa25.77■■□□□ 1.72
SSNA1-202ENST00000459860 RNF41Q9H4P4 317 aaPredicted RBP25.77■■□□□ 1.72
SSNA1-202ENST00000459860 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.77■■□□□ 1.72
SSNA1-202ENST00000459860 TMX2Q9Y320 296 aa25.77■■□□□ 1.72
SSNA1-202ENST00000459860 ADGRA2Q96PE1 1338 aa25.77■■□□□ 1.72
SSNA1-202ENST00000459860 PLIN4Q96Q06 1357 aa25.77■■□□□ 1.72
SSNA1-202ENST00000459860 A0A1W2PRG0 241 aa25.76■■□□□ 1.71
SSNA1-202ENST00000459860 SGSM2O43147 1006 aa25.76■■□□□ 1.71
SSNA1-202ENST00000459860 PCP11498 1178 aaKnown RBP25.76■■□□□ 1.71
SSNA1-202ENST00000459860 VCAM1P19320 739 aa25.76■■□□□ 1.71
SSNA1-202ENST00000459860 TFAP4Q01664 338 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms