RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 GCLCP48506 637 aaPredicted RBP19.23■□□□□ 0.67
CD28-203ENST00000458610 EVX2Q03828 476 aa19.23■□□□□ 0.67
CD28-203ENST00000458610 PPARAQ07869 468 aa19.23■□□□□ 0.67
CD28-203ENST00000458610 SHROOM1Q2M3G4 852 aaPredicted RBP19.23■□□□□ 0.67
CD28-203ENST00000458610 ERICH6BQ5W0A0 696 aa19.23■□□□□ 0.67
CD28-203ENST00000458610 CWC27Q6UX04 472 aaKnown RBP19.23■□□□□ 0.67
CD28-203ENST00000458610 RUFY2Q8WXA3 655 aa19.23■□□□□ 0.67
CD28-203ENST00000458610 DDX60LQ5H9U9 1706 aaKnown RBP19.22■□□□□ 0.67
CD28-203ENST00000458610 ROBO3Q96MS0 1386 aa19.22■□□□□ 0.67
CD28-203ENST00000458610 GNRH1P01148 92 aa19.22■□□□□ 0.67
CD28-203ENST00000458610 CYP2C8P10632 490 aa19.22■□□□□ 0.67
CD28-203ENST00000458610 AKR1B1P15121 316 aa19.22■□□□□ 0.67
CD28-203ENST00000458610 GUCY1A2P33402 732 aa19.22■□□□□ 0.67
CD28-203ENST00000458610 IRX3P78415 501 aaPredicted RBP19.22■□□□□ 0.67
CD28-203ENST00000458610 TREML2Q5T2D2 321 aa19.22■□□□□ 0.67
CD28-203ENST00000458610 C12orf42Q96LP6 360 aa19.22■□□□□ 0.67
CD28-203ENST00000458610 MCOLN1Q9GZU1 580 aa19.22■□□□□ 0.67
CD28-203ENST00000458610 CPA4Q9UI42 421 aa19.22■□□□□ 0.67
CD28-203ENST00000458610 CASP8AP2Q9UKL3 1982 aa19.22■□□□□ 0.67
CD28-203ENST00000458610 HSPD1P10809 573 aaKnown RBP19.21■□□□□ 0.67
CD28-203ENST00000458610 ICA1Q05084 483 aa19.21■□□□□ 0.67
CD28-203ENST00000458610 PPP4R3BQ5MIZ7 849 aa19.21■□□□□ 0.67
CD28-203ENST00000458610 GTF3C2Q8WUA4 911 aaPredicted RBP19.21■□□□□ 0.67
CD28-203ENST00000458610 EFCC1Q9HA90 598 aa19.21■□□□□ 0.67
CD28-203ENST00000458610 EMILIN3Q9NT22 766 aa19.21■□□□□ 0.67
CD28-203ENST00000458610 USP17L15C9J2P7 530 aa19.2■□□□□ 0.66
CD28-203ENST00000458610 USP17L13C9JLJ4 530 aa19.2■□□□□ 0.66
CD28-203ENST00000458610 USP17L11C9JVI0 530 aa19.2■□□□□ 0.66
CD28-203ENST00000458610 USP17L18D6R9N7 530 aa19.2■□□□□ 0.66
CD28-203ENST00000458610 USP17L22D6RA61 530 aa19.2■□□□□ 0.66
CD28-203ENST00000458610 USP17L17D6RBQ6 530 aa19.2■□□□□ 0.66
CD28-203ENST00000458610 USP17L19D6RCP7 530 aa19.2■□□□□ 0.66
CD28-203ENST00000458610 USP17L20D6RJB6 530 aa19.2■□□□□ 0.66
CD28-203ENST00000458610 FGAP02671 866 aa19.2■□□□□ 0.66
CD28-203ENST00000458610 GSPT1P15170 499 aaKnown RBP19.2■□□□□ 0.66
CD28-203ENST00000458610 HOXD10P28358 340 aa19.2■□□□□ 0.66
CD28-203ENST00000458610 USP17L24Q0WX57 530 aa19.2■□□□□ 0.66
CD28-203ENST00000458610 STK11IPQ8N1F8 1099 aa19.2■□□□□ 0.66
CD28-203ENST00000458610 CD99L2Q8TCZ2 262 aa19.2■□□□□ 0.66
CD28-203ENST00000458610 ACER1Q8TDN7 264 aa19.2■□□□□ 0.66
CD28-203ENST00000458610 ASCC2Q9H1I8 757 aaPredicted RBP19.2■□□□□ 0.66
CD28-203ENST00000458610 ANAPC4Q9UJX5 808 aa19.2■□□□□ 0.66
CD28-203ENST00000458610 TRIM17Q9Y577 477 aa19.2■□□□□ 0.66
CD28-203ENST00000458610 PCNTO95613 3336 aa19.2■□□□□ 0.66
CD28-203ENST00000458610 ZMYM6O95789 1325 aa19.2■□□□□ 0.66
CD28-203ENST00000458610 ATAD5Q96QE3 1844 aa19.19■□□□□ 0.66
CD28-203ENST00000458610 SMIM22K7EJ46 135 aa19.19■□□□□ 0.66
CD28-203ENST00000458610 RASA1P20936 1047 aa19.19■□□□□ 0.66
CD28-203ENST00000458610 LACTBP83111 547 aaPredicted RBP19.19■□□□□ 0.66
CD28-203ENST00000458610 ZYXQ15942 572 aaKnown RBP19.19■□□□□ 0.66
CD28-203ENST00000458610 VPS53Q5VIR6 699 aa19.19■□□□□ 0.66
CD28-203ENST00000458610 FBXO46Q6PJ61 603 aaPredicted RBP19.19■□□□□ 0.66
CD28-203ENST00000458610 LPAR1Q92633 364 aa19.19■□□□□ 0.66
CD28-203ENST00000458610 TMX2Q9Y320 296 aa19.19■□□□□ 0.66
CD28-203ENST00000458610 BAZ2AQ9UIF9 1905 aaKnown RBP19.19■□□□□ 0.66
CD28-203ENST00000458610 ADGRA2Q96PE1 1338 aa19.19■□□□□ 0.66
CD28-203ENST00000458610 PHIPQ8WWQ0 1821 aa19.18■□□□□ 0.66
CD28-203ENST00000458610 TSPY3P0CV98 308 aa19.18■□□□□ 0.66
CD28-203ENST00000458610 TSPY8P0CW00 308 aa19.18■□□□□ 0.66
CD28-203ENST00000458610 BCRP11274 1271 aa19.18■□□□□ 0.66
CD28-203ENST00000458610 PRMT2P55345 433 aa19.18■□□□□ 0.66
CD28-203ENST00000458610 ATP2B2Q01814 1243 aa19.18■□□□□ 0.66
CD28-203ENST00000458610 ZNF589Q86UQ0 364 aaPredicted RBP19.18■□□□□ 0.66
CD28-203ENST00000458610 CTNNA3Q9UI47 895 aa19.18■□□□□ 0.66
CD28-203ENST00000458610 FOXP2O15409 715 aa19.17■□□□□ 0.66
CD28-203ENST00000458610 PCP11498 1178 aaKnown RBP19.17■□□□□ 0.66
CD28-203ENST00000458610 OTOP1Q7RTM1 612 aa19.17■□□□□ 0.66
CD28-203ENST00000458610 ABHD8Q96I13 439 aa19.17■□□□□ 0.66
CD28-203ENST00000458610 DSCC1Q9BVC3 393 aa19.17■□□□□ 0.66
CD28-203ENST00000458610 GOPCQ9HD26 462 aa19.17■□□□□ 0.66
CD28-203ENST00000458610 NYAP2Q9P242 653 aa19.17■□□□□ 0.66
CD28-203ENST00000458610 RAD50Q92878 1312 aa19.17■□□□□ 0.66
CD28-203ENST00000458610 A0A1W2PRG0 241 aa19.16■□□□□ 0.66
CD28-203ENST00000458610 PRDM1O75626 825 aa19.16■□□□□ 0.66
CD28-203ENST00000458610 FMNL1O95466 1100 aaPredicted RBP19.16■□□□□ 0.66
CD28-203ENST00000458610 EEF2P13639 858 aaKnown RBP19.16■□□□□ 0.66
CD28-203ENST00000458610 VCAM1P19320 739 aa19.16■□□□□ 0.66
CD28-203ENST00000458610 PSMC4P43686 418 aa19.16■□□□□ 0.66
CD28-203ENST00000458610 NT5C2P49902 561 aa19.16■□□□□ 0.66
CD28-203ENST00000458610 FCGRTP55899 365 aa19.16■□□□□ 0.66
CD28-203ENST00000458610 FAM110CQ1W6H9 321 aa19.16■□□□□ 0.66
CD28-203ENST00000458610 IFFO2Q5TF58 517 aa19.16■□□□□ 0.66
CD28-203ENST00000458610 CATSPERGQ6ZRH7 1159 aa19.16■□□□□ 0.66
CD28-203ENST00000458610 NEDD1Q8NHV4 660 aa19.16■□□□□ 0.66
CD28-203ENST00000458610 P2RX7Q99572 595 aaKnown RBP19.16■□□□□ 0.66
CD28-203ENST00000458610 RNF41Q9H4P4 317 aaPredicted RBP19.16■□□□□ 0.66
CD28-203ENST00000458610 HOXC10Q9NYD6 342 aa19.16■□□□□ 0.66
CD28-203ENST00000458610 ZNF213O14771 459 aa19.15■□□□□ 0.66
CD28-203ENST00000458610 CHMLP26374 656 aa19.15■□□□□ 0.66
CD28-203ENST00000458610 HERVK_113P62684 666 aa19.15■□□□□ 0.66
CD28-203ENST00000458610 TFAP4Q01664 338 aa19.15■□□□□ 0.66
CD28-203ENST00000458610 CTDSPL2Q05D32 466 aa19.15■□□□□ 0.66
CD28-203ENST00000458610 SIAH1Q8IUQ4 282 aa19.15■□□□□ 0.66
CD28-203ENST00000458610 ANKRD13CQ8N6S4 541 aa19.15■□□□□ 0.66
CD28-203ENST00000458610 VCPKMTQ9H867 229 aa19.15■□□□□ 0.66
CD28-203ENST00000458610 SYNPO2Q9UMS6 1093 aa19.15■□□□□ 0.66
CD28-203ENST00000458610 TSPY2A6NKD2 308 aa19.14■□□□□ 0.65
CD28-203ENST00000458610 ORC4O43929 436 aa19.14■□□□□ 0.65
CD28-203ENST00000458610 FGRP09769 529 aa19.14■□□□□ 0.65
CD28-203ENST00000458610 COG2Q14746 738 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms