RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 FAM84BQ96KN1 310 aaPredicted RBP23.61■■□□□ 1.37
CRAT-207ENST00000458362 BRIP1Q9BX63 1249 aa23.61■■□□□ 1.37
CRAT-207ENST00000458362 SAMSN1Q9NSI8 373 aaKnown RBP23.61■■□□□ 1.37
CRAT-207ENST00000458362 AATFQ9NY61 560 aaKnown RBP eCLIP23.61■■□□□ 1.37
CRAT-207ENST00000458362 MINPP1Q9UNW1 487 aa23.61■■□□□ 1.37
CRAT-207ENST00000458362 CCP110O43303 1012 aa23.6■■□□□ 1.37
CRAT-207ENST00000458362 CTR9Q6PD62 1173 aa23.6■■□□□ 1.37
CRAT-207ENST00000458362 CATIPQ7Z7H3 387 aa23.6■■□□□ 1.37
CRAT-207ENST00000458362 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.6■■□□□ 1.37
CRAT-207ENST00000458362 COL5A3P25940 1745 aaPredicted RBP23.6■■□□□ 1.37
CRAT-207ENST00000458362 TUBB4AP04350 444 aa23.59■■□□□ 1.37
CRAT-207ENST00000458362 PLCD1P51178 756 aa23.59■■□□□ 1.37
CRAT-207ENST00000458362 KANK3Q6NY19 840 aa23.59■■□□□ 1.37
CRAT-207ENST00000458362 BSDC1Q9NW68 430 aaPredicted RBP23.59■■□□□ 1.37
CRAT-207ENST00000458362 DACH1Q9UI36 760 aa23.59■■□□□ 1.37
CRAT-207ENST00000458362 ZNF652Q9Y2D9 606 aa23.59■■□□□ 1.37
CRAT-207ENST00000458362 PHLPP2Q6ZVD8 1323 aa23.59■■□□□ 1.37
CRAT-207ENST00000458362 MYH13Q9UKX3 1938 aa23.59■■□□□ 1.37
CRAT-207ENST00000458362 KCNQ2O43526 872 aa23.59■■□□□ 1.37
CRAT-207ENST00000458362 CDK11BP21127 795 aaKnown RBP23.59■■□□□ 1.37
CRAT-207ENST00000458362 KLRK1P26718 216 aa23.59■■□□□ 1.37
CRAT-207ENST00000458362 CASP1P29466 404 aa23.59■■□□□ 1.37
CRAT-207ENST00000458362 TROAPQ12815 778 aa23.59■■□□□ 1.37
CRAT-207ENST00000458362 SF3B3Q15393 1217 aaKnown RBP23.59■■□□□ 1.37
CRAT-207ENST00000458362 ERCC6LQ2NKX8 1250 aa23.59■■□□□ 1.37
CRAT-207ENST00000458362 FGRP09769 529 aa23.58■■□□□ 1.37
CRAT-207ENST00000458362 XBP1P17861 261 aa23.58■■□□□ 1.37
CRAT-207ENST00000458362 NPY5RQ15761 445 aa23.58■■□□□ 1.37
CRAT-207ENST00000458362 FCHSD1Q86WN1 690 aa23.58■■□□□ 1.37
CRAT-207ENST00000458362 TC2NQ8N9U0 490 aa23.58■■□□□ 1.37
CRAT-207ENST00000458362 CELF1Q92879 486 aaKnown RBP23.58■■□□□ 1.37
CRAT-207ENST00000458362 MORC2Q9Y6X9 1032 aaPredicted RBP23.58■■□□□ 1.37
CRAT-207ENST00000458362 AFMP43652 599 aa23.58■■□□□ 1.36
CRAT-207ENST00000458362 CAVIN4Q5BKX8 364 aa23.58■■□□□ 1.36
CRAT-207ENST00000458362 TNFRSF25Q93038 417 aa23.58■■□□□ 1.36
CRAT-207ENST00000458362 VWA3AA6NCI4 1184 aa23.57■■□□□ 1.36
CRAT-207ENST00000458362 USP17L12C9JPN9 530 aa23.57■■□□□ 1.36
CRAT-207ENST00000458362 USP17L21D6R901 530 aa23.57■■□□□ 1.36
CRAT-207ENST00000458362 ADKP55263 362 aaKnown RBP23.57■■□□□ 1.36
CRAT-207ENST00000458362 SPECC1LQ69YQ0 1117 aa23.57■■□□□ 1.36
CRAT-207ENST00000458362 SYMPKQ92797 1274 aaKnown RBP23.57■■□□□ 1.36
CRAT-207ENST00000458362 PKNOX2Q96KN3 472 aa23.57■■□□□ 1.36
CRAT-207ENST00000458362 PPP2R2CQ9Y2T4 447 aa23.57■■□□□ 1.36
CRAT-207ENST00000458362 ARHGAP6O43182 974 aa23.57■■□□□ 1.36
CRAT-207ENST00000458362 NMT2O60551 498 aa23.57■■□□□ 1.36
CRAT-207ENST00000458362 CD44P16070 742 aaKnown RBP23.57■■□□□ 1.36
CRAT-207ENST00000458362 UTP14CQ5TAP6 766 aaKnown RBP23.57■■□□□ 1.36
CRAT-207ENST00000458362 TMTC3Q6ZXV5 915 aa23.57■■□□□ 1.36
CRAT-207ENST00000458362 SMIM5Q71RC9 77 aa23.57■■□□□ 1.36
CRAT-207ENST00000458362 SH3RF1Q7Z6J0 888 aa23.57■■□□□ 1.36
CRAT-207ENST00000458362 NUTM2AQ8IVF1 878 aaPredicted RBP23.57■■□□□ 1.36
CRAT-207ENST00000458362 BAG1Q99933 345 aaPredicted RBP23.57■■□□□ 1.36
CRAT-207ENST00000458362 NOL10Q9BSC4 688 aaKnown RBP23.57■■□□□ 1.36
CRAT-207ENST00000458362 RBM28Q9NW13 759 aaKnown RBP23.57■■□□□ 1.36
CRAT-207ENST00000458362 ZNF174Q15697 407 aa23.56■■□□□ 1.36
CRAT-207ENST00000458362 IQCA1Q86XH1 822 aa23.56■■□□□ 1.36
CRAT-207ENST00000458362 PAGE5Q96GU1 130 aa23.56■■□□□ 1.36
CRAT-207ENST00000458362 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.56■■□□□ 1.36
CRAT-207ENST00000458362 CNTNAP5Q8WYK1 1306 aa23.56■■□□□ 1.36
CRAT-207ENST00000458362 SLFN14P0C7P3 912 aa23.56■■□□□ 1.36
CRAT-207ENST00000458362 CLEC4GQ6UXB4 293 aa23.56■■□□□ 1.36
CRAT-207ENST00000458362 BICDL1Q6ZP65 573 aa23.56■■□□□ 1.36
CRAT-207ENST00000458362 LINC00116Q8NCU8 138 aa23.56■■□□□ 1.36
CRAT-207ENST00000458362 ERCC5P28715 1186 aaPredicted RBP23.55■■□□□ 1.36
CRAT-207ENST00000458362 KCNQ4P56696 695 aa23.55■■□□□ 1.36
CRAT-207ENST00000458362 NR1I3Q14994 352 aa23.55■■□□□ 1.36
CRAT-207ENST00000458362 FBXO33Q7Z6M2 555 aa23.55■■□□□ 1.36
CRAT-207ENST00000458362 SRBD1Q8N5C6 995 aaKnown RBP23.55■■□□□ 1.36
CRAT-207ENST00000458362 NSUN4Q96CB9 384 aaKnown RBP23.55■■□□□ 1.36
CRAT-207ENST00000458362 ZNF446Q9NWS9 450 aa23.55■■□□□ 1.36
CRAT-207ENST00000458362 BAZ2BQ9UIF8 2168 aaKnown RBP23.55■■□□□ 1.36
CRAT-207ENST00000458362 MECOMQ03112 1051 aa23.54■■□□□ 1.36
CRAT-207ENST00000458362 TOGARAM2Q6ZUX3 1019 aa23.54■■□□□ 1.36
CRAT-207ENST00000458362 APTXQ7Z2E3 356 aaKnown RBP23.54■■□□□ 1.36
CRAT-207ENST00000458362 ADAMTS3O15072 1205 aa23.54■■□□□ 1.36
CRAT-207ENST00000458362 ZSCAN12O43309 604 aa23.54■■□□□ 1.36
CRAT-207ENST00000458362 DDAH1O94760 285 aa23.54■■□□□ 1.36
CRAT-207ENST00000458362 CYP2D6P10635 497 aa23.54■■□□□ 1.36
CRAT-207ENST00000458362 CUL4BQ13620 913 aa23.54■■□□□ 1.36
CRAT-207ENST00000458362 FAM47AQ5JRC9 791 aa23.54■■□□□ 1.36
CRAT-207ENST00000458362 LAMB1P07942 1786 aa23.53■■□□□ 1.36
CRAT-207ENST00000458362 CALM1P0DP23 149 aa23.53■■□□□ 1.36
CRAT-207ENST00000458362 CALM2P0DP24 149 aa23.53■■□□□ 1.36
CRAT-207ENST00000458362 CALM3P0DP25 149 aa23.53■■□□□ 1.36
CRAT-207ENST00000458362 H2AFXP16104 143 aaPredicted RBP23.53■■□□□ 1.36
CRAT-207ENST00000458362 STX17P56962 302 aa23.53■■□□□ 1.36
CRAT-207ENST00000458362 TTC38Q5R3I4 469 aa23.53■■□□□ 1.36
CRAT-207ENST00000458362 FERMT2Q96AC1 680 aa23.53■■□□□ 1.36
CRAT-207ENST00000458362 GTPBP4Q9BZE4 634 aaKnown RBP23.53■■□□□ 1.36
CRAT-207ENST00000458362 A0A1B0GTH6 734 aa23.53■■□□□ 1.36
CRAT-207ENST00000458362 DPYDQ12882 1025 aa23.53■■□□□ 1.36
CRAT-207ENST00000458362 KLHL10Q6JEL2 608 aa23.53■■□□□ 1.36
CRAT-207ENST00000458362 SMYD4Q8IYR2 804 aaPredicted RBP23.53■■□□□ 1.36
CRAT-207ENST00000458362 FAM177A1Q8N128 213 aaPredicted RBP23.53■■□□□ 1.36
CRAT-207ENST00000458362 PARP3Q9Y6F1 533 aa23.53■■□□□ 1.36
CRAT-207ENST00000458362 TEX33O43247 280 aa23.52■■□□□ 1.36
CRAT-207ENST00000458362 STX10O60499 249 aa23.52■■□□□ 1.36
CRAT-207ENST00000458362 VEGFAP15692 232 aaPredicted RBP23.52■■□□□ 1.36
CRAT-207ENST00000458362 FAM53CQ9NYF3 392 aa23.52■■□□□ 1.36
CRAT-207ENST00000458362 ORC4O43929 436 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms